PDB: 2705 件ウェブページステータス検索Chemie searchBIRD

---

4V9F	The re-refined crystal structure of the Haloarcula marismortui large ribosomal subunit at 2.4 Angstrom resolution: more complete structure of the L7/L12 and L1 stalk, L5 and LX proteins 分子名称: 23S Ribosomal RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ... 著者 Gabdulkhakov, A. 登録日 2012-11-02 公開日 2014-07-09 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.404 Å) 主引用文献 Revisiting the Haloarcula marismortui 50S ribosomal subunit model. Acta Crystallogr.,Sect.D, 69, 2013
4V9P	Control of ribosomal subunit rotation by elongation factor G 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Pulk, A, Cate, J.H.D. 登録日 2013-05-03 公開日 2014-07-09 最終更新日 2014-12-17 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Control of ribosomal subunit rotation by elongation factor G. Science, 340, 2013
3CME	The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui 分子名称: 50S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ... 著者 Simonovic, M, Steitz, T.A. 登録日 2008-03-21 公開日 2008-09-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.95 Å) 主引用文献 Peptidyl-CCA deacylation on the ribosome promoted by induced fit and the O3'-hydroxyl group of A76 of the unacylated A-site tRNA. Rna, 14, 2008
4V9O	Control of ribosomal subunit rotation by elongation factor G 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Pulk, A, Cate, J.H.D. 登録日 2013-05-03 公開日 2014-07-09 最終更新日 2014-12-17 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Control of ribosomal subunit rotation by elongation factor G. Science, 340, 2013
4V4I	Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements. 分子名称: 16S SMALL SUBUNIT RIBOSOMAL RNA, 23S LARGE SUBUNIT RIBOSOMAL RNA, 30S ribosomal protein S10, ... 著者 Korostelev, A, Trakhanov, S, Laurberg, M, Noller, H.F. 登録日 2007-02-15 公開日 2014-07-09 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.71 Å) 主引用文献 Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements Cell(Cambridge,Mass.), 126, 2006
4V6X	Structure of the human 80S ribosome 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Anger, A.M, Armache, J.-P, Berninghausen, O, Habeck, M, Subklewe, M, Wilson, D.N, Beckmann, R. 登録日 2013-02-27 公開日 2014-07-09 最終更新日 2023-02-01 実験手法 ELECTRON MICROSCOPY (5 Å) 主引用文献 Structures of the human and Drosophila 80S ribosome. Nature, 497, 2013
4V4W	Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal subunit protein S10, ... 著者 Mitra, K, Frank, J. 登録日 2006-05-09 公開日 2014-07-09 最終更新日 2024-02-28 実験手法 ELECTRON MICROSCOPY (15 Å) 主引用文献 Elongation arrest by SecM via a cascade of ribosomal RNA rearrangements Mol.Cell, 22, 2006
6TH6	Cryo-EM Structure of T. kodakarensis 70S ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Matzov, D, Sas-Chen, A, Thomas, J.M, Santangelo, T, Meier, J.L, Schwartz, S, Shalev-Benami, M. 登録日 2019-11-18 公開日 2020-07-29 最終更新日 2024-04-24 実験手法 ELECTRON MICROSCOPY (2.55 Å) 主引用文献 Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping. Nature, 583, 2020
5MYJ	Structure of 70S ribosome from Lactococcus lactis 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Franken, L.E, Oostergetel, G.T, Pijning, T, Puri, P, Boekema, E.J, Poolman, B, Guskov, A. 登録日 2017-01-26 公開日 2017-10-11 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (5.6 Å) 主引用文献 A general mechanism of ribosome dimerization revealed by single-particle cryo-electron microscopy. Nat Commun, 8, 2017
6G72	Mouse mitochondrial complex I in the deactive state 分子名称: ACETYL GROUP, ADENOSINE-5'-DIPHOSPHATE, Acyl carrier protein, ... 著者 Agip, A.N.A, Blaza, J.N, Bridges, H.R, Viscomi, C, Rawson, S, Muench, S.P, Hirst, J. 登録日 2018-04-04 公開日 2018-06-06 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Cryo-EM structures of complex I from mouse heart mitochondria in two biochemically defined states. Nat. Struct. Mol. Biol., 25, 2018
6GC6	50S ribosomal subunit assembly intermediate state 2 分子名称: 23S ribosomal RNA, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Nikolay, R, Hilal, T, Qin, B, Loerke, J, Buerger, J, Mielke, T, Spahn, C.M.T. 登録日 2018-04-17 公開日 2018-07-04 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Structural Visualization of the Formation and Activation of the 50S Ribosomal Subunit during In Vitro Reconstitution. Mol. Cell, 70, 2018
6TB3	yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complex 分子名称: 25S rRNA, 40S ribosomal protein S0-A, 40S ribosomal protein S1-A, ... 著者 Buschauer, R, Cheng, J, Berninghausen, O, Tesina, P, Becker, T, Beckmann, R. 登録日 2019-10-31 公開日 2020-04-22 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 The Ccr4-Not complex monitors the translating ribosome for codon optimality. Science, 368, 2020
6GCS	Cryo-EM structure of respiratory complex I from Yarrowia lipolytica 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, 24-KDA SUBUNIT (NUHM), 30-KDA PROTEIN (NUGM), ... 著者 Parey, K, Vonck, J. 登録日 2018-04-19 公開日 2018-10-10 最終更新日 2021-06-02 実験手法 ELECTRON MICROSCOPY (4.32 Å) 主引用文献 Cryo-EM structure of respiratory complex I at work. Elife, 7, 2018
3CMA	The structure of CCA and CCA-Phe-Cap-Bio bound to the large ribosomal subunit of Haloarcula marismortui 分子名称: 23S RIBOSOMAL RNA, 50S ribosomal protein L10E, 50S ribosomal protein L10e, ... 著者 Simonovic, M, Steitz, T.A. 登録日 2008-03-21 公開日 2008-09-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Peptidyl-CCA deacylation on the ribosome promoted by induced fit and the O3'-hydroxyl group of A76 of the unacylated A-site tRNA. Rna, 14, 2008
6TJV	Structure of the NDH-1MS complex from Thermosynechococcus elongatus 分子名称: (1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATE, 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, BETA-CAROTENE, ... 著者 Schuller, J.M, Saura, P, Thiemann, J, Schuller, S.K, Gamiz-Hernandez, A.P, Kurisu, G, Nowaczyk, M.M, Kaila, V.R.I. 登録日 2019-11-27 公開日 2020-02-19 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Redox-coupled proton pumping drives carbon concentration in the photosynthetic complex I. Nat Commun, 11, 2020
6TNN	Mini-RNase III (Mini-III) bound to 50S ribosome with precursor 23S rRNA 分子名称: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C. 登録日 2019-12-09 公開日 2020-09-30 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs. Mol.Cell, 80, 2020
7KGB	CryoEM structure of A2296-methylated Mycobacterium tuberculosis ribosome bound with SEQ-9 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Cui, Z, Zhang, J. 登録日 2020-10-16 公開日 2022-01-19 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Discovery of natural-product-derived sequanamycins as potent oral anti-tuberculosis agents. Cell, 2023
3G6E	Co-crystal structure of Homoharringtonine bound to the large ribosomal subunit 分子名称: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 23S ribosomal RNA, 50S ribosomal protein L10E, ... 著者 Gurel, G, Blaha, G, Moore, P.B, Steitz, T.A. 登録日 2009-02-06 公開日 2009-04-28 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 U2504 determines the species specificity of the A-site cleft antibiotics: the structures of tiamulin, homoharringtonine, and bruceantin bound to the ribosome. J.Mol.Biol., 389, 2009
6TPQ	RNase M5 bound to 50S ribosome with precursor 5S rRNA 分子名称: 50S ribosomal protein L10, 50S ribosomal protein L13, 50S ribosomal protein L14, ... 著者 Oerum, S, Dendooven, T, Gilet, L, Catala, M, Degut, C, Trinquier, A, Barraud, P, Luisi, B, Condon, C, Tisne, C. 登録日 2019-12-13 公開日 2020-09-30 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 Structures of B. subtilis Maturation RNases Captured on 50S Ribosome with Pre-rRNAs. Mol.Cell, 80, 2020
6U48	E. coli 50S with phazolicin (PHZ) bound in exit tunnel 分子名称: 23S rRNA, 50S ribosomal protein bL17, 50S ribosomal protein bL19, ... 著者 Watson, Z.L, Cate, J.H.D, Polikanov, Y.S, Severinov, K. 登録日 2019-08-23 公開日 2019-09-18 最終更新日 2023-11-15 実験手法 ELECTRON MICROSCOPY (2.87 Å) 主引用文献 Structure of ribosome-bound azole-modified peptide phazolicin rationalizes its species-specific mode of bacterial translation inhibition. Nat Commun, 10, 2019
3CF5	Thiopeptide antibiotic Thiostrepton bound to the large ribosomal subunit of Deinococcus radiodurans 分子名称: 50S RIBOSOMAL PROTEIN L11, 50S RIBOSOMAL PROTEIN L13, 50S RIBOSOMAL PROTEIN L14, ... 著者 Harms, J.M, Wilson, D.N, Schluenzen, F, Connell, S.R, Stachelhaus, T, Zaborowska, Z, Spahn, C.M.T, Fucini, P. 登録日 2008-03-02 公開日 2008-06-17 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Translational Regulation Via L11: Molecular Switches on the Ribosome Turned on and Off by Thiostrepton and Micrococcin. Mol.Cell, 30, 2008
6GZQ	T. thermophilus hibernating 70S ribosome 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Flygaard, R.K, Jenner, L.B. 登録日 2018-07-04 公開日 2018-10-24 実験手法 ELECTRON MICROSCOPY (3.28 Å) 主引用文献 Cryo-EM structure of the hibernating Thermus thermophilus 100S ribosome reveals a protein-mediated dimerization mechanism. Nat Commun, 9, 2018
7LV0	Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Demo, G, Loveland, A.B, Svidritskiy, E, Gamper, H.B, Hou, Y.M, Korostelev, A.A. 登録日 2021-02-23 公開日 2021-07-28 最終更新日 2021-08-25 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation. Nat Commun, 12, 2021
5NWY	2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complex 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Su, T, Cheng, J, Sohmen, D, Hedman, R, Berninghausen, O, von Heijne, G, Wilson, D.N, Beckmann, R. 登録日 2017-05-08 公開日 2017-07-19 最終更新日 2019-12-11 実験手法 ELECTRON MICROSCOPY (2.93 Å) 主引用文献 The force-sensing peptide VemP employs extreme compaction and secondary structure formation to induce ribosomal stalling. Elife, 6, 2017
3CPW	The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI 分子名称: 23S RIBOSOMAL RNA, 5'-R(*CP*CP*AP*(PHE)*(ACA))-3', 50S ribosomal protein L10E, ... 著者 Ippolito, J.A, Kanyo, Z.K, Wang, D, Franceschi, F.J, Moore, P.B, Steitz, T.A, Duffy, E.M. 登録日 2008-04-01 公開日 2008-07-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structure of the Oxazolidinone Antibiotic Linezolid Bound to the 50S Ribosomal Subunit J.Med.Chem., 51, 2008

<55565758596061626364656667686970>