Cryo-EM Structure of T. kodakarensis 70S ribosome

This is a large structure.

Summary for 6TH6

EMDB information10503
Descriptor16S ribosomal RNA, 30S ribosomal protein S2, 30S ribosomal protein S3, ... (63 entities in total)
Functional Keywordst. kodakarensis, ac4c, ribosome, cryo-em
Biological sourceThermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Total number of polymer chains63
Total molecular weight2430842.04
Matzov, D.,Sas-Chen, A.,Thomas, J.M.,Santangelo, T.,Meier, J.L.,Schwartz, S.,Shalev-Benami, M. (deposition date: 2019-11-18, release date: 2020-07-29, Last modification date: 2020-08-05)
Primary citation
Sas-Chen, A.,Thomas, J.M.,Matzov, D.,Taoka, M.,Nance, K.D.,Nir, R.,Bryson, K.M.,Shachar, R.,Liman, G.L.S.,Burkhart, B.W.,Gamage, S.T.,Nobe, Y.,Briney, C.A.,Levy, M.J.,Fuchs, R.T.,Robb, G.B.,Hartmann, J.,Sharma, S.,Lin, Q.,Florens, L.,Washburn, M.P.,Isobe, T.,Santangelo, T.J.,Shalev-Benami, M.,Meier, J.L.,Schwartz, S.
Dynamic RNA acetylation revealed by quantitative cross-evolutionary mapping.
Nature, 583:638-643, 2020
PubMed: 32555463 (PDB entries with the same primary citation)
DOI: 10.1038/s41586-020-2418-2
MImport into Mendeley
Experimental method

Structure validation

ClashscoreRamachandran outliersSidechain outliersRNA backbone50 0.2% 0.50MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures
Download full validation reportDownload
PDB entries from 2020-08-12