| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | Aa | 16S ribosomal RNA | polymer | 1498 | 486944.8 | 1 | | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 2 | Ab | 30S ribosomal protein S2 | polymer | 201 | 23039.8 | 1 | UniProt (Q5JJD2)
Pfam (PF00318)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 3 | Ac | 30S ribosomal protein S3 | polymer | 209 | 23390.2 | 1 | UniProt (Q5JDH5)
Pfam (PF07650)
Pfam (PF00189)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 4 | Ad | 30S ribosomal protein S3Ae | polymer | 200 | 23064.9 | 1 | UniProt (Q5JGM4)
Pfam (PF01015)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | Ribosomal protein S1e |
| 5 | Ae | 30S ribosomal protein S4 | polymer | 180 | 21240.6 | 1 | UniProt (Q5JJF2)
Pfam (PF00163)
Pfam (PF01479)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 6 | Af | 30S ribosomal protein S4e | polymer | 243 | 27820.6 | 1 | UniProt (Q5JJG0)
Pfam (PF00900)
Pfam (PF08071)
Pfam (PF01479)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 7 | Ag | 30S ribosomal protein S5 | polymer | 235 | 26372.6 | 1 | UniProt (Q5JJG8)
Pfam (PF00333)
Pfam (PF03719)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 8 | Ah | 30S ribosomal protein S6e | polymer | 125 | 13761.0 | 1 | UniProt (Q5JDK8)
Pfam (PF01092)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 9 | Ai | 30S ribosomal protein S7 | polymer | 215 | 24573.7 | 1 | UniProt (Q5JE04)
Pfam (PF00177)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 10 | Aj | 30S ribosomal protein S8 | polymer | 130 | 14602.1 | 1 | UniProt (Q5JJG3)
Pfam (PF00410)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 11 | Ak | 30S ribosomal protein S8e | polymer | 130 | 14548.0 | 1 | UniProt (Q5JGF3)
Pfam (PF01201)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 12 | Al | 30S ribosomal protein S9 | polymer | 135 | 15358.9 | 1 | UniProt (Q5JJE2)
Pfam (PF00380)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 13 | Am | 30S ribosomal protein S10 | polymer | 102 | 11716.7 | 1 | UniProt (Q5JFZ5)
Pfam (PF00338)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 14 | An | 30S ribosomal protein S11 | polymer | 140 | 15111.2 | 1 | UniProt (Q5JJF3)
Pfam (PF00411)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 15 | Ao | 30S ribosomal protein S12 | polymer | 147 | 16488.5 | 1 | UniProt (Q5JE20)
Pfam (PF00164)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 16 | Ap | 30S ribosomal protein S13 | polymer | 149 | 17025.9 | 1 | UniProt (Q5JJF1)
Pfam (PF00416)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 17 | Aq | 30S ribosomal protein S15 | polymer | 151 | 17583.8 | 1 | UniProt (Q5JGJ4)
Pfam (PF08069)
Pfam (PF00312)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 18 | Ar | 30S ribosomal protein S14 type Z | polymer | 56 | 6634.1 | 1 | UniProt (Q5JJG2)
Pfam (PF00253)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 19 | As | 30S ribosomal protein S17 | polymer | 114 | 13219.4 | 1 | UniProt (Q5JDH9)
Pfam (PF00366)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 20 | At | 30S ribosomal protein S17e | polymer | 67 | 8036.4 | 1 | UniProt (Q5JDC7)
Pfam (PF00833)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 21 | Au | 30S ribosomal protein S19 | polymer | 133 | 15453.4 | 1 | UniProt (Q5JDH3)
Pfam (PF00203)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 22 | Av | 30S ribosomal protein S19e | polymer | 150 | 17304.0 | 1 | UniProt (Q5JGN5)
Pfam (PF01090)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 23 | Aw | 30S ribosomal protein S24e | polymer | 98 | 11458.1 | 1 | UniProt (Q5JIY8)
Pfam (PF01282)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 24 | Ax | 30S ribosomal protein S27e | polymer | 65 | 7069.6 | 1 | UniProt (Q5JE50)
Pfam (PF01667)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 25 | Ay | 30S ribosomal protein S28e | polymer | 70 | 7971.2 | 1 | UniProt (Q5JGR4)
Pfam (PF01200)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 26 | Az | Predicted zinc-ribbon RNA-binding protein involved in translation | polymer | 62 | 7001.2 | 1 | UniProt (Q5JFE2)
Pfam (PF07754)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 27 | BA | 23S ribosomal RNA | polymer | 3037 | 987668.9 | 1 | | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 28 | BB | 5S ribosomal RNA | polymer | 126 | 40744.3 | 1 | GenBank (57158259) | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 29 | BC | 50S ribosomal protein L2 | polymer | 239 | 26092.4 | 1 | UniProt (Q5JDH2)
Pfam (PF00181)
Pfam (PF03947)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 30 | BD | 50S ribosomal protein L3 | polymer | 346 | 39118.6 | 1 | UniProt (Q5JDJ0)
Pfam (PF00297)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 31 | BE | 50S ribosomal protein L4 | polymer | 255 | 28768.6 | 1 | UniProt (Q5JDI0)
Pfam (PF00573)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 32 | BF | 50S ribosomal protein L5 | polymer | 183 | 21027.6 | 1 | UniProt (Q5JJG1)
Pfam (PF00281)
Pfam (PF00673)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 33 | BG | 50S ribosomal protein L6 | polymer | 184 | 20888.3 | 1 | UniProt (Q5JJG4)
Pfam (PF00347)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 34 | BH, BI | 50S ribosomal protein L7Ae | polymer | 123 | 13454.6 | 2 | UniProt (Q5JGR3)
Pfam (PF01248)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | Ribosomal protein L8e |
| 35 | BJ | 50S ribosomal protein L10e | polymer | 182 | 21116.6 | 1 | UniProt (Q5JDI6)
Pfam (PF00252)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 36 | BK | 50S ribosomal protein L13 | polymer | 142 | 16316.2 | 1 | UniProt (Q5JJF6)
Pfam (PF00572)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 37 | BL | 50S ribosomal protein L14 | polymer | 141 | 15181.9 | 1 | UniProt (Q5JJF8)
Pfam (PF00238)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 38 | BM, BN | 50S ribosomal protein L14e | polymer | 83 | 8968.5 | 2 | UniProt (Q5JJE4)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 39 | BO | 50S ribosomal protein L15 | polymer | 148 | 16571.4 | 1 | UniProt (Q5JJH0)
Pfam (PF00828)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 40 | BP | 50S ribosomal protein L15e | polymer | 194 | 22607.9 | 1 | UniProt (Q5JH43)
Pfam (PF00827)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 41 | BQ | 50S ribosomal protein L18 | polymer | 201 | 22895.4 | 1 | UniProt (Q5JJG7)
Pfam (PF17144)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 42 | BR | 50S ribosomal protein L18e | polymer | 121 | 13799.2 | 1 | UniProt (Q5JJF5)
Pfam (PF17135)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 43 | BS | 50S ribosomal protein L19e | polymer | 150 | 17667.2 | 1 | UniProt (Q5JJG6)
Pfam (PF01280)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 44 | BT | 50S ribosomal protein L18Ae | polymer | 77 | 9227.7 | 1 | UniProt (Q5JGT3)
Pfam (PF01775)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | 50S ribosomal protein L20e,50S ribosomal protein LX |
| 45 | BU | 50S ribosomal protein L21e | polymer | 98 | 11290.3 | 1 | UniProt (Q5JI51)
Pfam (PF01157)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 46 | BV | 50S ribosomal protein L22 | polymer | 156 | 17838.8 | 1 | UniProt (Q5JDH4)
Pfam (PF00237)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 47 | BW | 50S ribosomal protein L23 | polymer | 86 | 9915.8 | 1 | UniProt (Q5JDH1)
Pfam (PF00276)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 48 | BX | 50S ribosomal protein L24 | polymer | 121 | 14225.8 | 1 | UniProt (Q5JJF9)
Pfam (PF16906)
Pfam (PF00467)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 49 | BY | 50S ribosomal protein L24e | polymer | 67 | 8111.6 | 1 | UniProt (Q5JGR5)
Pfam (PF01246)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 50 | BZ | 50S ribosomal protein L29 | polymer | 66 | 7937.5 | 1 | UniProt (Q5JDH6)
Pfam (PF00831)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 51 | Ba | 50S ribosomal protein L30 | polymer | 155 | 17856.2 | 1 | UniProt (Q5JJG9)
Pfam (PF00327)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 52 | Bb | 50S ribosomal protein L30e | polymer | 102 | 10972.8 | 1 | UniProt (Q5JE35)
Pfam (PF01248)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 53 | Bc | 50S ribosomal protein L31e | polymer | 90 | 10354.3 | 1 | UniProt (Q5JGT5)
Pfam (PF01198)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 54 | Bd | 50S ribosomal protein L32e | polymer | 125 | 14654.5 | 1 | UniProt (Q5JJG5)
Pfam (PF01655)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 55 | Be | 50S ribosomal protein L34e | polymer | 90 | 10558.8 | 1 | UniProt (Q5JJF7)
Pfam (PF01199)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 56 | Bg | 50S ribosomal protein L37Ae | polymer | 86 | 9240.0 | 1 | UniProt (Q5JDM6)
Pfam (PF01780)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | Ribosomal protein L43e |
| 57 | Bh | 50S ribosomal protein L37e | polymer | 63 | 7470.9 | 1 | UniProt (Q5JIE1)
Pfam (PF01907)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 58 | Bi | 50S ribosomal protein L39e | polymer | 51 | 6262.7 | 1 | UniProt (Q5JGT6)
Pfam (PF00832)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 59 | Bj | 50S ribosomal protein L40e | polymer | 51 | 5782.0 | 1 | UniProt (Q5JJD3)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 60 | Bk | LSU ribosomal protein L41E | polymer | 37 | 5051.4 | 1 | UniProt (Q5JEV0)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 61 | Bl | 50S ribosomal protein L44e | polymer | 94 | 11204.4 | 1 | UniProt (Q5JE51)
Pfam (PF00935)
In PDB | Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) | |
| 62 | Ag, Ar, As, Ax, Az... | ZINC ION | non-polymer | | 65.4 | 12 | Chemie (ZN) | | |
| 63 | | water | water | | 18.0 | 2129 | Chemie (HOH) | | |
