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6KN0
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caspase-1 P20/P10 C285A in complex with human GSDMD-C domain
分子名称: Caspase-1, Gasdermin-D
著者Ding, J, Sun, Q.
登録日2019-08-02
公開日2020-03-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.793 Å)
主引用文献Structural Mechanism for GSDMD Targeting by Autoprocessed Caspases in Pyroptosis.
Cell, 180, 2020
6U1D
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BU of 6u1d by Molmil
Thermus thermophilus D-alanine-D-alanine ligase in complex with ATP, D-alanine-D-alanine, Mg2+ and Rb+
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase, ...
著者Pederick, J.L, Bruning, J.B.
登録日2019-08-15
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations.
J.Biol.Chem., 295, 2020
8PV5
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BU of 8pv5 by Molmil
Chaetomium thermophilum pre-60S State 8 - pre-5S rotation without Foot - composite structure
分子名称: 26S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Thoms, M, Cheng, J, Denk, T, Berninghausen, O, Beckmann, R.
登録日2023-07-17
公開日2023-11-15
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (2.86 Å)
主引用文献Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Embo Rep., 24, 2023
6KL5
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BU of 6kl5 by Molmil
Structure of The N-terminal domain of Middle East respiratory syndrome coronavirus Nucleocapsid Protein complexed with Benzyl 2-(Hydroxymethyl)-1-Indolinecarboxylate
分子名称: (phenylmethyl) (2S)-2-(hydroxymethyl)-2,3-dihydroindole-1-carboxylate, Nucleoprotein
著者Hou, M.H, Lin, S.M, Hsu, J.N, Wang, Y.S.
登録日2019-07-29
公開日2020-03-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Structure-Based Stabilization of Non-native Protein-Protein Interactions of Coronavirus Nucleocapsid Proteins in Antiviral Drug Design.
J.Med.Chem., 63, 2020
6U1C
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BU of 6u1c by Molmil
Apo form of Thermus thermophilus D-alanine-D-alanine ligase
分子名称: D-alanine--D-alanine ligase
著者Pederick, J.L, Bruning, J.B.
登録日2019-08-15
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations.
J.Biol.Chem., 295, 2020
6U3D
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BU of 6u3d by Molmil
1.75 Angstrom crystal structure of the N53I Ca-CaM:CaV1.2 IQ domain complex
分子名称: CALCIUM ION, Calmodulin-1, Voltage-dependent L-type calcium channel subunit alpha-1C
著者Wang, K, Van Petegem, F.
登録日2019-08-21
公開日2020-02-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Arrhythmia mutations in calmodulin can disrupt cooperativity of Ca2+binding and cause misfolding.
J. Physiol. (Lond.), 598, 2020
6KN1
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BU of 6kn1 by Molmil
P20/P12 of caspase-11 mutant C254A
分子名称: Caspase-4
著者Ding, J, Sun, Q.
登録日2019-08-02
公開日2020-03-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Mechanism for GSDMD Targeting by Autoprocessed Caspases in Pyroptosis.
Cell, 180, 2020
6UMX
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BU of 6umx by Molmil
Structural basis for specific inhibition of extracellular activation of pro/latent myostatin by SRK-015
分子名称: GL29H4-16 Fab Heavy Chain,GL29H4-16 Fab Heavy Chain, GL29H4-16 Fab Light Chain,GL29H4-16 Fab Light Chain, GLYCEROL, ...
著者Dagbay, K.B, Treece, E, Streich Jr, F.C, Jackson, J.W, Faucette, R.R, Nikiforov, A, Lin, S.C, Bostion, C.J, Nicholls, S.B, Capili, A.D, Carven, G.J.
登録日2019-10-10
公開日2020-02-26
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Structural basis of specific inhibition of extracellular activation of pro- or latent myostatin by the monoclonal antibody SRK-015.
J.Biol.Chem., 295, 2020
8PVK
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BU of 8pvk by Molmil
Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structure
分子名称: 26S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Thoms, M, Cheng, J, Denk, T, Berninghausen, O, Beckmann, R.
登録日2023-07-17
公開日2023-12-06
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (2.55 Å)
主引用文献Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Embo Rep., 24, 2023
8PVL
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BU of 8pvl by Molmil
Chaetomium thermophilum pre-60S State 7 - pre-5S rotation lacking Utp30/ITS2 - composite structure
分子名称: 26S rRNA, 5.8S rRNA, 5S rRNA, ...
著者Thoms, M, Cheng, J, Denk, T, Berninghausen, O, Beckmann, R.
登録日2023-07-17
公開日2023-12-06
最終更新日2023-12-20
実験手法ELECTRON MICROSCOPY (2.19 Å)
主引用文献Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Embo Rep., 24, 2023
6GCT
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BU of 6gct by Molmil
cryo-EM structure of the human neutral amino acid transporter ASCT2
分子名称: GLUTAMINE, Neutral amino acid transporter B(0)
著者Garaeva, A.A, Oostergetel, G.T, Gati, C, Guskov, A, Paulino, C, Slotboom, D.J.
登録日2018-04-19
公開日2018-06-13
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.85 Å)
主引用文献Cryo-EM structure of the human neutral amino acid transporter ASCT2.
Nat. Struct. Mol. Biol., 25, 2018
6KL6
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BU of 6kl6 by Molmil
Crystal structure of MERS-CoV N-NTD complexed with 5-Benzyloxygramine
分子名称: N,N-dimethyl-1-(5-phenylmethoxy-1H-indol-3-yl)methanamine, Nucleoprotein
著者Hou, M.H, Lin, S.M, Wang, Y.S, Hsu, J.N.
登録日2019-07-29
公開日2020-03-25
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.77 Å)
主引用文献Structure-Based Stabilization of Non-native Protein-Protein Interactions of Coronavirus Nucleocapsid Proteins in Antiviral Drug Design.
J.Med.Chem., 63, 2020
6IER
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BU of 6ier by Molmil
Apo structure of a beta-glucosidase 1317
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, beta-glucosidase 1317
著者Xie, W, Liu, X.
登録日2018-09-16
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.246 Å)
主引用文献Improving the cellobiose-hydrolysis activity and glucose-tolerance of a thermostable beta-glucosidase through rational design.
Int.J.Biol.Macromol., 136, 2019
6IF3
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BU of 6if3 by Molmil
Complex structure of Rab35 and its effector ACAP2
分子名称: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Lin, L, Zhu, J, Zhang, R.
登録日2018-09-18
公開日2019-04-03
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Rab35/ACAP2 and Rab35/RUSC2 Complex Structures Reveal Molecular Basis for Effector Recognition by Rab35 GTPase.
Structure, 27, 2019
6FP6
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BU of 6fp6 by Molmil
Complex of human Cu,Zn SOD1 with the human copper chaperone for SOD1 in a compact conformation
分子名称: Copper chaperone for superoxide dismutase, GLYCEROL, PROPANOIC ACID, ...
著者Sala, F.A, Wright, G.S.A, Antonyuk, S.V, Garratt, R.C, Hasnain, S.S.
登録日2018-02-09
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Molecular recognition and maturation of SOD1 by its evolutionarily destabilised cognate chaperone hCCS.
Plos Biol., 17, 2019
5EIL
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BU of 5eil by Molmil
Computational design of a high-affinity metalloprotein homotrimer containing a metal chelating non-canonical amino acid
分子名称: FE (III) ION, TRI-05
著者Sankaran, B, Zwart, P.H, Mills, J.H, Pereira, J.H, Baker, D.
登録日2015-10-30
公開日2016-11-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Computational design of a homotrimeric metalloprotein with a trisbipyridyl core.
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5EPP
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BU of 5epp by Molmil
Structural Insights into the Interaction of p97 N-terminus Domain and VBM Motif in Rhomboid Protease, RHBDL4
分子名称: Rhomboid-related protein 4, Transitional endoplasmic reticulum ATPase
著者Lim, J.J, Lee, Y, Ly, T.T, Kang, J.Y, Lee, J.-G, An, J.Y, Youn, H.-S, Park, K.R, Kim, T.G, Yang, J.K, Jun, Y, Eom, S.H.
登録日2015-11-12
公開日2016-09-14
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural insights into the interaction of p97 N-terminus domain and VBM in rhomboid protease, RHBDL4.
Biochem.J., 473, 2016
7MU2
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BU of 7mu2 by Molmil
Crystal Structure of WIPI2 in complex with W2IR of ATG16L1
分子名称: Autophagy-related protein 16-1, WD repeat domain phosphoinositide-interacting protein 2
著者Strong, L.M, Flower, T.G, Buffalo, C.Z, Hurley, J.H.
登録日2021-05-14
公開日2021-05-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural basis for membrane recruitment of ATG16L1 by WIPI2 in autophagy.
Elife, 10, 2021
5EFR
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BU of 5efr by Molmil
Crystal Structure of a BamA-BamD fusion
分子名称: BamA-BamD fusion Protein
著者Bergal, H.T, Hopkins, A.H, Metzner, S.I, Sousa, M.C.
登録日2015-10-24
公開日2016-01-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Structure of a BamA-BamD Fusion Illuminates the Architecture of the beta-Barrel Assembly Machine Core.
Structure, 24, 2016
6U1J
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BU of 6u1j by Molmil
Thermus thermophilus D-alanine-D-alanine ligase in complex with ADP, phosphate, D-ala-D-ala, Mg2+ and K+
分子名称: ADENOSINE-5'-DIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase, ...
著者Pederick, J.L, Bruning, J.B, Thompson, A.P.
登録日2019-08-15
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations.
J.Biol.Chem., 295, 2020
5XR3
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BU of 5xr3 by Molmil
SAV0551 with glyoxylate
分子名称: GLYOXYLIC ACID, Protein/nucleic acid deglycase HchA
著者Kim, H.J, Kwon, A.R, Lee, B.J.
登録日2017-06-08
公開日2017-11-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structural and functional studies of SAV0551 fromStaphylococcus aureusas a chaperone and glyoxalase III.
Biosci. Rep., 37, 2017
6FOL
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BU of 6fol by Molmil
Domain II of the human copper chaperone in complex with human Cu,Zn superoxide dismutase
分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, Copper chaperone for superoxide dismutase, GLYCEROL, ...
著者Sala, F.A, Wright, G.S.A, Antonyuk, S.V, Garratt, R.C, Hasnain, S.S.
登録日2018-02-07
公開日2019-01-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Molecular recognition and maturation of SOD1 by its evolutionarily destabilised cognate chaperone hCCS.
Plos Biol., 17, 2019
6FW2
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BU of 6fw2 by Molmil
Crystal Structure of human mARC1
分子名称: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MOLYBDATE ION, Mitochondrial amidoxime-reducing component 1,Endolysin,Mitochondrial amidoxime-reducing component 1, ...
著者Kubitza, C, Scheidig, A.
登録日2018-03-05
公開日2018-10-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Crystal structure of human mARC1 reveals its exceptional position among eukaryotic molybdenum enzymes.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6FWD
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BU of 6fwd by Molmil
Crystal structure of human transthyretin double mutant R34G/T119M at pH 5.5
分子名称: Transthyretin
著者Esperante, S, Ventura, S, Reverter, D, Varejao, N.
登録日2018-03-06
公開日2019-03-20
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.576 Å)
主引用文献Disease-associated mutations impacting BC-loop flexibility trigger long-range transthyretin tetramer destabilization and aggregation.
J.Biol.Chem., 297, 2021
6U1E
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BU of 6u1e by Molmil
Thermus thermophilus D-alanine-D-alanine ligase in complex with ATP, D-alanine-D-alanine, Mg2+ and Rb+
分子名称: ADENOSINE-5'-TRIPHOSPHATE, D-ALANINE, D-alanine--D-alanine ligase, ...
著者Pederick, J.L, Bruning, J.B.
登録日2019-08-15
公開日2020-05-06
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献d-Alanine-d-alanine ligase as a model for the activation of ATP-grasp enzymes by monovalent cations.
J.Biol.Chem., 295, 2020

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