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6GCD
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DNA binding domain of restriction endonuclease McrBC in complex with 5-hydroxymethylcytosine DNA
分子名称: 5-methylcytosine-specific restriction enzyme B, DNA (5'-D(*GP*AP*GP*AP*(5HC)P*CP*GP*GP*TP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*AP*(5HC)P*CP*GP*GP*TP*CP*TP*C)-3')
著者Sasnauskas, G, Manakova, E.
登録日2018-04-17
公開日2018-09-19
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Recognition of modified cytosine variants by the DNA-binding domain of methyl-directed endonuclease McrBC.
FEBS Lett., 592, 2018
4DGG
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c-SRC kinase domain in complex with RM-1-176
分子名称: 3-{6-[(3-chlorobenzyl)oxy]naphthalen-2-yl}-1-(propan-2-yl)-1H-pyrazolo[3,4-d]pyrimidin-4-amine, Proto-oncogene tyrosine-protein kinase Src
著者Merritt, E.A, Larson, E.T.
登録日2012-01-25
公開日2012-10-10
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Active site profiling reveals coupling between domains in SRC-family kinases.
Nat.Chem.Biol., 9, 2013
5FTG
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Human choline kinase a1 in complex with compound 1-[[4-[2-[4-[[4-(dimethylamino)pyridin-1- yl]methyl]phenoxy]ethoxy]phenyl]methyl]-N,N- dimethyl-pyridin-4-amine (compound 10a)
分子名称: 1,2-ETHANEDIOL, 1-[[4-[2-[4-[[4-(dimethylamino)pyridin-1-yl]methyl]phenoxy]ethoxy]phenyl]methyl]-N,N-dimethyl-pyridin-4-amine, CHOLINE KINASE ALPHA
著者Schiaffino-Ortega, S, Baglioni, E, Mariotto, E, Bortolozzi, R, Serran-Aguilera, L, Rios-Marco, P, Carrasco-Jimenez, M.P, Gallo, M.A, Hurtado-Guerrero, R, Marco, C, Basso, G, Viola, G, Entrena, A, Lopez-Cara, L.C.
登録日2016-01-13
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Design, Synthesis, Crystallization and Biological Evaluation of New Symmetrical Biscationic Compounds as Selective Inhibitors of Human Choline Kinase Alpha1 (Chokalpha1)
Sci.Rep., 6, 2016
6CHI
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BU of 6chi by Molmil
Human Cytochrome P450 17A1 in complex with inhibitor: abiraterone C6 amide
分子名称: 3-hydroxy-17-(3-pyridyl)-androst-5,16-dien-6-amide, PROTOPORPHYRIN IX CONTAINING FE, Steroid 17-alpha-hydroxylase/17,20 lyase
著者Scott, E.E.
登録日2018-02-22
公開日2018-06-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.698 Å)
主引用文献Structure-Based Design of Inhibitors with Improved Selectivity for Steroidogenic Cytochrome P450 17A1 over Cytochrome P450 21A2.
J. Med. Chem., 61, 2018
1HCX
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BU of 1hcx by Molmil
Choline binding domain of the major autolysin (C-LytA) from Streptococcus pneumoniae
分子名称: 2,2':6',2''-TERPYRIDINE PLATINUM(II) Chloride, CHOLINE ION, DECYLAMINE-N,N-DIMETHYL-N-OXIDE, ...
著者Fernandez-Tornero, C, Lopez, R, Garcia, E, Gimenez-Gallego, G, Romero, A.
登録日2001-05-10
公開日2001-11-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Novel Solenoid Fold in the Cell Wall Anchoring Domain of the Pneumococcal Virulence Factor Lyta
Nat.Struct.Biol., 8, 2001
1H7G
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The structure of CMP:2-keto-3-deoxy-manno-octonic acid synthetase and of its complexes with substrates and substrate analogues, CTP MG2+ complex
分子名称: 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE, CYTIDINE-5'-TRIPHOSPHATE, MAGNESIUM ION
著者Jelakovic, S, Schulz, G.E.
登録日2001-07-06
公開日2001-09-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.13 Å)
主引用文献The Structure of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid Synthetase and of its Complexes with Substrates and Substrate Analogs
J.Mol.Biol., 312, 2001
3NOD
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BU of 3nod by Molmil
MURINE INDUCIBLE NITRIC OXIDE SYNTHASE OXYGENASE DIMER (DELTA 65) WITH TETRAHYDROBIOPTERIN AND PRODUCT ANALOGUE L-THIOCITRULLINE
分子名称: 5,6,7,8-TETRAHYDROBIOPTERIN, L-THIOCITRULLINE, NITRIC OXIDE SYNTHASE, ...
著者Crane, B.R, Arvai, A.S, Getzoff, E.D, Stuehr, D.J, Tainer, J.A.
登録日1998-03-06
公開日1999-03-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structure of nitric oxide synthase oxygenase dimer with pterin and substrate.
Science, 279, 1998
1CY1
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BU of 1cy1 by Molmil
COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'PTPTPT
分子名称: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-3',5'-DIPHOSPHATE, ...
著者Feinberg, H, Changela, A, Mondragon, A.
登録日1999-08-31
公開日2000-03-03
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Protein-nucleotide interactions in E. coli DNA topoisomerase I.
Nat.Struct.Biol., 6, 1999
6FSZ
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Structure of the nuclear RNA exosome
分子名称: ATP-dependent RNA helicase DOB1, Exosome complex component CSL4, Exosome complex component MTR3, ...
著者Schuller, J.M, Falk, S, Conti, E.
登録日2018-02-20
公開日2018-03-21
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structure of the nuclear exosome captured on a maturing preribosome.
Science, 360, 2018
6FUG
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Complement factor D in complex with the inhibitor 3-((3-((3-(aminomethyl)phenyl)amino)-1H-pyrazolo[3,4-d]pyrimidin-4-yl)amino)phenol
分子名称: 3-[[3-[[3-(aminomethyl)phenyl]amino]-1~{H}-pyrazolo[3,4-d]pyrimidin-4-yl]amino]phenol, Complement factor D
著者Mac Sweeney, A, Ostermann, N, Vulpetti, A, Maibaum, J, Erbel, P, Lorthiois, E, Yoon, T, Randl, S, Ruedisser, S.
登録日2018-02-27
公開日2018-06-06
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献Discovery and Design of First Benzylamine-Based Ligands Binding to an Unlocked Conformation of the Complement Factor D.
ACS Med Chem Lett, 9, 2018
1H7H
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BU of 1h7h by Molmil
The structure of CMP:2-keto-3-deoxy-manno-octonic acid synthetase and of its complexes with substrates and substrate analogues, CDP complex
分子名称: 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE, CYTIDINE-5'-DIPHOSPHATE
著者Jelakovic, S, Schulz, G.E.
登録日2001-07-06
公開日2001-09-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Structure of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid Synthetase and of its Complexes with Substrates and Substrate Analogs
J.Mol.Biol., 312, 2001
5A7E
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BU of 5a7e by Molmil
Crystallographic Structural Determination of a Trigonal Laccase from Coriolopsis Gallica (CgL) to 1.5 A resolution
分子名称: ACETATE ION, COPPER (II) ION, CORIOLOPSIS GALLICA LACCASE, ...
著者Ruiz-Arellano, R.R, Diaz, A, Ayala, M, De la Mora, E, Rudino-Pinera, E.
登録日2015-07-03
公開日2016-05-25
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Metal Site Delocalization Observed in a Model Multicopper Oxidase: An Insight Into Water Release Mechanism
To be Published
1H7F
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BU of 1h7f by Molmil
The structure of CMP:2-keto-3-deoxy-manno-octonic acid synthetase and of its complexes with substrates and substrate analogues, CMP complex
分子名称: 3-DEOXY-MANNO-OCTULOSONATE CYTIDYLYLTRANSFERASE, CYTIDINE-5'-MONOPHOSPHATE
著者Jelakovic, S, Schulz, G.E.
登録日2001-07-06
公開日2001-09-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.12 Å)
主引用文献The Structure of Cmp:2-Keto-3-Deoxy-Manno-Octonic Acid Synthetase and of its Complexes with Substrates and Substrate Analogs
J.Mol.Biol., 312, 2001
5UJ7
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BU of 5uj7 by Molmil
Structure of the active form of human Origin Recognition Complex ATPase motor module, complex subunitS 1, 4, 5
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Origin recognition complex subunit 1, ...
著者Tocilj, A, Elkayam, E, On, K.F, Joshua-Tor, L.
登録日2017-01-17
公開日2017-02-08
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.394 Å)
主引用文献Structure of the active form of human Origin Recognition Complex and its ATPase motor module.
Elife, 6, 2017
6VZ3
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BU of 6vz3 by Molmil
Escherichia coli transcription-translation complex D2 (TTC-D2) containing mRNA with a 27 nt long spacer
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-02-27
公開日2020-09-02
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (8.9 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
3IWD
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BU of 3iwd by Molmil
T. maritima AdoMetDC complex with 5'-Deoxy-5'-dimethyl thioadenosine
分子名称: 5'-deoxy-5'-(dimethyl-lambda~4~-sulfanyl)adenosine, S-adenosylmethionine decarboxylase
著者Bale, S, Kavita, B, Ealick, S.E.
登録日2009-09-02
公開日2010-02-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Complexes of Thermotoga maritimaS-adenosylmethionine decarboxylase provide insights into substrate specificity.
Acta Crystallogr.,Sect.D, 66, 2010
1HHS
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BU of 1hhs by Molmil
RNA dependent RNA polymerase from dsRNA bacteriophage phi6
分子名称: MANGANESE (II) ION, RNA-DIRECTED RNA POLYMERASE
著者Grimes, J.M, Butcher, S.J, Makeyev, E.V, Bamford, D.H, Stuart, D.I.
登録日2000-12-28
公開日2001-03-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A Mechanism for Initiating RNA-Dependent RNA Polymerization
Nature, 410, 2001
1N49
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BU of 1n49 by Molmil
Viability of a Drug-Resistant HIV-1 Protease Variant: Structural Insights for Better Anti-Viral Therapy
分子名称: Protease, RITONAVIR
著者Prabu-Jeyabalan, M, Nalivaika, E.A, King, N.M, Schiffer, C.A.
登録日2002-10-30
公開日2003-01-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Viability of a Drug-Resistant Human Immunodeficiency Virus Type 1 Protease Variant: Structural Insights for Better Antiviral Therapy
J.VIROL., 77, 2003
6VOM
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Chloroplast ATP synthase (R2, CF1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ATP synthase delta chain, ...
著者Yang, J.-H, Williams, D, Kandiah, E, Fromme, P, Chiu, P.-L.
登録日2020-01-30
公開日2020-09-09
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural basis of redox modulation on chloroplast ATP synthase.
Commun Biol, 3, 2020
1XV9
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BU of 1xv9 by Molmil
crystal structure of CAR/RXR heterodimer bound with SRC1 peptide, fatty acid, and 5b-pregnane-3,20-dione.
分子名称: (5BETA)-PREGNANE-3,20-DIONE, Orphan nuclear receptor NR1I3, PENTADECANOIC ACID, ...
著者Xu, R.X, Lambert, M.H, Wisely, B.B, Warren, E.N, Weinert, E.E, Waitt, G.M, Williams, J.D, Moore, L.B, Willson, T.M, Moore, J.T.
登録日2004-10-27
公開日2004-12-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A Structural Basis for Constitutive Activity in the Human CAR/RXRalpha Heterodimer.
Mol.Cell, 16, 2004
4N0T
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BU of 4n0t by Molmil
Core structure of the U6 small nuclear ribonucleoprotein at 1.7 Angstrom resolution
分子名称: SULFATE ION, U4/U6 snRNA-associated-splicing factor PRP24, U6 snRNA
著者Montemayor, E.J, Curran, E.C, Liao, H, Andrews, K.L, Treba, C.N, Butcher, S.E, Brow, D.A.
登録日2013-10-02
公開日2014-05-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Core structure of the U6 small nuclear ribonucleoprotein at 1.7- angstrom resolution.
Nat.Struct.Mol.Biol., 21, 2014
1H8D
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BU of 1h8d by Molmil
X-ray structure of the human alpha-thrombin complex with a tripeptide phosphonate inhibitor.
分子名称: HIRUDIN I, N-[(benzyloxy)carbonyl]-beta-phenyl-D-phenylalanyl-N-{(1S,3E)-1-[dihydroxy(diphenoxy)-lambda~5~-phosphanyl]-4-methoxybut-3-en-1-yl}-L-prolinamide, THROMBIN
著者Skordalakes, E, Dodson, G.G, Green, D, Deadman, J.
登録日2001-02-01
公開日2001-02-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Inhibition of Human Alpha-Thrombin by a Phosphonate Tripeptide Proceeds Via a Metastable Pentacoordinated Phosphorus Intermediate
J.Mol.Biol., 311, 2001
5HNO
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The structure of the kdo-capped saccharide binding subunit of the O-12 specific ABC transporter, Wzt
分子名称: ABC type transport system putative ATP binding protein, CHLORIDE ION
著者Mallette, E, Mann, E, Whitfield, C, Kimber, M.S.
登録日2016-01-18
公開日2016-03-09
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The Klebsiella pneumoniae O12 ATP-binding Cassette (ABC) Transporter Recognizes the Terminal Residue of Its O-antigen Polysaccharide Substrate.
J.Biol.Chem., 291, 2016
3IWC
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BU of 3iwc by Molmil
T. maritima AdoMetDC complex with S-Adenosylmethionine methyl ester
分子名称: S-ADENOSYLMETHIONINE METHYL ESTER, S-adenosylmethionine decarboxylase
著者Bale, S, Kavita, B, Ealick, S.E.
登録日2009-09-02
公開日2010-02-09
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Complexes of Thermotoga maritimaS-adenosylmethionine decarboxylase provide insights into substrate specificity.
Acta Crystallogr.,Sect.D, 66, 2010
3J0S
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Remodeling of actin filaments by ADF cofilin proteins
分子名称: Actin, cytoplasmic 1, Cofilin-2
著者Galkin, V.E, Orlova, A, Kudryashov, D.S, Solodukhin, A, Reisler, E, Schroeder, G.F, Egelman, E.H.
登録日2011-11-24
公開日2011-12-21
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (9 Å)
主引用文献Remodeling of actin filaments by ADF/cofilin proteins.
Proc.Natl.Acad.Sci.USA, 108, 2011

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