PDB: 1507 件ウェブページステータス検索Chemie searchBIRD

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2K39	Recognition dynamics up to microseconds revealed from RDC derived ubiquitin ensemble in solution 分子名称: Ubiquitin 著者 Lange, O.F, Lakomek, N.A, Fares, C, Schroder, G, Walter, K, Becker, S, Meiler, J, Grubmuller, H, Griesinger, C, de Groot, B.L. 登録日 2008-04-25 公開日 2008-06-24 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution. Science, 320, 2008
2K25	Automated NMR Structure of the UBB by FAPSY 分子名称: UBB 著者 Lee, W, Jung, J, Lee, W. 登録日 2008-03-24 公開日 2008-09-30 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 The Automated Suite for Protein Structure by NMR Spectroscopy To be Published
3CMM	Crystal Structure of the Uba1-Ubiquitin Complex 分子名称: PROLINE, Ubiquitin, Ubiquitin-activating enzyme E1 1 著者 Lee, I, Schindelin, H. 登録日 2008-03-23 公開日 2008-08-05 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural insights into E1-catalyzed ubiquitin activation and transfer to conjugating enzymes. Cell(Cambridge,Mass.), 134, 2008
2JZZ	Solid-State NMR Structure of Microcrystalline Ubiquitin 分子名称: Ubiquitin 著者 Manolikas, T, Herrmann, T, Meier, B.H. 登録日 2008-01-22 公開日 2008-03-25 最終更新日 2024-05-08 実験手法 SOLID-STATE NMR 主引用文献 Protein structure determination from 13C spin-diffusion solid-state NMR spectroscopy. J.Am.Chem.Soc., 130, 2008
3C0R	Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin 分子名称: 3-AMINOPROPANE, Ubiquitin, Ubiquitin thioesterase OTU1 著者 Messick, T.E, Marmorstein, R. 登録日 2008-01-21 公開日 2008-02-19 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.315 Å) 主引用文献 Structural basis for ubiquitin recognition by the Otu1 ovarian tumor domain protein J.Biol.Chem., 283, 2008
3BY4	Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin 分子名称: 3-AMINOPROPANE, Ubiquitin, Ubiquitin thioesterase OTU1 著者 Messick, T.E, Marmorstein, R. 登録日 2008-01-15 公開日 2008-02-19 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural basis for ubiquitin recognition by the Otu1 ovarian tumor domain protein J.Biol.Chem., 283, 2008
2JZ3	SOCS box elonginBC ternary complex 分子名称: Suppressor of cytokine signaling 3, Transcription elongation factor B polypeptide 1, Transcription elongation factor B polypeptide 2 著者 Babon, J.J, Sabo, J, Soetopo, A, Yao, S, Bailey, M.F, Zhang, J, Nicola, N.A, Norton, R.S. 登録日 2007-12-27 公開日 2008-09-23 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The SOCS box domain of SOCS3: structure and interaction with the elonginBC-cullin5 ubiquitin ligase J.Mol.Biol., 381, 2008
2ZEQ	Crystal structure of ubiquitin-like domain of murine Parkin 分子名称: E3 ubiquitin-protein ligase parkin 著者 Tomoo, K. 登録日 2007-12-14 公開日 2008-08-19 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal structure and molecular dynamics simulation of ubiquitin-like domain of murine parkin Biochim.Biophys.Acta, 1784, 2008
2JY6	Solution structure of the complex of ubiquitin and ubiquilin 1 UBA domain 分子名称: Ubiquilin-1, Ubiquitin protein 著者 Zhang, D, Raasi, S, Fushman, D. 登録日 2007-12-06 公開日 2008-03-18 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Affinity makes the difference: nonselective interaction of the UBA domain of Ubiquilin-1 with monomeric ubiquitin and polyubiquitin chains J.Mol.Biol., 377, 2008
2ZCB	Crystal Structure of ubiquitin P37A/P38A 分子名称: Ubiquitin, ZINC ION 著者 Kitahara, R, Tanaka, T, Sakata, E, Yamaguchi, Y, Kato, K, Yokoyama, S. 登録日 2007-11-08 公開日 2007-11-20 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal Structure of ubiquitin P37A/P38A To be published
2ZCC	Ubiquitin crystallized under high pressure 分子名称: Ubiquitin, ZINC ION 著者 Kitahara, R, Tanaka, T, Yamashita, M, Araya, K, Yokoyama, S, Akasaka, K, Taniguchi, Y, Kato, M. 登録日 2007-11-08 公開日 2007-11-20 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structure of Ubiquitin crystallized under high pressure to be published
2JWZ	Mutations in the hydrophobic core of ubiquitin differentially affect its recognition by receptor proteins 分子名称: Ubiquitin 著者 Haririnia, A, Verma, R, Purohit, N, Twarog, M, Deshaies, R, Bolon, D, Fushman, D. 登録日 2007-10-31 公開日 2008-01-08 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Mutations in the hydrophobic core of ubiquitin differentially affect its recognition by receptor proteins. J.Mol.Biol., 375, 2008
2JT4	Solution Structure of the Sla1 SH3-3-Ubiquitin Complex 分子名称: Cytoskeleton assembly control protein SLA1, Ubiquitin 著者 He, Y, Radhakrishnan, I. 登録日 2007-07-18 公開日 2007-09-25 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Structural Basis for Ubiquitin Recognition by SH3 Domains J.Mol.Biol., 373, 2007
2QHO	Crystal structure of the UBA domain from EDD ubiquitin ligase in complex with ubiquitin 分子名称: E3 ubiquitin-protein ligase EDD1, Ubiquitin 著者 Kozlov, G, Gehring, K. 登録日 2007-07-02 公開日 2007-09-25 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural basis of ubiquitin recognition by the ubiquitin-associated (UBA) domain of the ubiquitin ligase EDD. J.Biol.Chem., 282, 2007
2Z59	Complex Structures of Mouse Rpn13 (22-130aa) and ubiquitin 分子名称: Protein ADRM1, Ubiquitin 著者 Chen, X, Schreiner, P, Groll, M, Walters, K.J. 登録日 2007-07-01 公開日 2008-05-20 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction. Nature, 453, 2008
2JRI	Solution structure of the Josephin domain of Ataxin-3 in complex with ubiquitin molecule. 分子名称: Ataxin-3, UBC protein 著者 Nicastro, G, Masino, L, Esposito, V, Menon, R, Pastore, A. 登録日 2007-06-27 公開日 2008-07-01 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Understanding the plasticity of the ubiquitin-protein recognition code: the josephin domain of ataxin-3 is a diubiquitin binding motif To be Published
2PEA	NMR Based Structure of the Closed Conformation of LYS48-Linked Di-Ubiquitin Using Experimental Global Rotational Diffusion Tensor from NMR Relaxation Measurements 分子名称: Ubiquitin 著者 Ryabov, Y, Fushman, D. 登録日 2007-04-02 公開日 2007-07-10 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural assembly of multidomain proteins and protein complexes guided by the overall rotational diffusion tensor. J.Am.Chem.Soc., 129, 2007
2PE9	NMR Based Structure of the Open Conformation of LYS48-Linked Di-UBiquitin Using Experimental Global Rotational Diffusion Tensor from NMR Relaxation Measurements 分子名称: Ubiquitin 著者 Ryabov, Y, Fushman, D. 登録日 2007-04-02 公開日 2007-07-10 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural assembly of multidomain proteins and protein complexes guided by the overall rotational diffusion tensor. J.Am.Chem.Soc., 129, 2007
2EKE	Structure of a SUMO-binding-motif mimic bound to Smt3p-Ubc9p: conservation of a noncovalent Ubiquitin-like protein-E2 complex as a platform for selective interactions within a SUMO pathway 分子名称: SUMO-conjugating enzyme UBC9, Ubiquitin-like protein SMT3 著者 Duda, D.M, Schulman, B.A. 登録日 2007-03-23 公開日 2007-05-29 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of a SUMO-binding-motif Mimic Bound to Smt3p-Ubc9p: Conservation of a Non-covalent Ubiquitin-like Protein-E2 Complex as a Platform for Selective Interactions within a SUMO Pathway J.Mol.Biol., 369, 2007
2JF5	crystal structure of Lys63-linked di-ubiquitin 分子名称: CADMIUM ION, CHLORIDE ION, COBALT (II) ION, ... 著者 Komander, D, Odenwaelder, P, Barford, D. 登録日 2007-01-26 公開日 2008-02-05 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Molecular Discrimination of Structurally Equivalent Lys 63-Linked and Linear Polyubiquitin Chains. Embo Rep., 10, 2009
2OOB	crystal structure of the UBA domain from Cbl-b ubiquitin ligase in complex with ubiquitin 分子名称: E3 ubiquitin-protein ligase CBL-B, Ubiquitin 著者 Kozlov, G, Gehring, K. 登録日 2007-01-25 公開日 2007-02-06 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural basis for ubiquitin-mediated dimerization and activation of the ubiquitin protein ligase Cbl-b. Mol.Cell, 27, 2007
2OJR	Structure of ubiquitin solved by SAD using the Lanthanide-Binding Tag 分子名称: TERBIUM(III) ION, Ubiquitin 著者 Silvaggi, N.R, Allen, K.N. 登録日 2007-01-13 公開日 2007-06-12 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Double-Lanthanide-Binding Tags for Macromolecular Crystallographic Structure Determination. J.Am.Chem.Soc., 129, 2007
2O6V	Crystal structure and solution NMR studies of Lys48-linked tetraubiquitin at neutral pH 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SULFATE ION, Ubiquitin 著者 Eddins, M.J, Wolberger, C. 登録日 2006-12-08 公開日 2007-02-13 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal Structure and Solution NMR Studies of Lys48-linked Tetraubiquitin at Neutral pH J.Mol.Biol., 367, 2007
2NVU	Structure of APPBP1-UBA3~NEDD8-NEDD8-MgATP-Ubc12(C111A), a trapped ubiquitin-like protein activation complex 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera, ... 著者 Huang, D.T, Hunt, H.W, Zhuang, M, Ohi, M.D, Holton, J.M, Schulman, B.A. 登録日 2006-11-13 公開日 2007-01-30 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Basis for a ubiquitin-like protein thioester switch toggling E1-E2 affinity. Nature, 445, 2007
2NR2	The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native states ensembles of proteins 分子名称: Ubiquitin 著者 Richter, B, Gsponer, J, Varnai, P, Salvatella, X, Vendruscolo, M. 登録日 2006-11-01 公開日 2007-05-08 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 The MUMO (minimal under-restraining minimal over-restraining) method for the determination of native state ensembles of proteins J.Biomol.Nmr, 37, 2007

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