2JF5

crystal structure of Lys63-linked di-ubiquitin

Summary for 2JF5

Related1C3T 1D3Z 1F9J 1FXT 1G6J 1GJZ 1NBF 1OGW 1Q5W 1S1Q 1SIF 1TBE 1UBI 1UBQ 1XD3 1XQQ 1YX5 1YX6 1ZGU 2AYO 2BGF 2FCM 2FCN 2FCQ 2FCS 2FUH 2G45 2GBK 2GBM 2GBN 2J7Q
DescriptorUBIQUITIN, CADMIUM ION, MAGNESIUM ION, ... (6 entities in total)
Functional Keywordslys6, lys63, nf-kb, ubiquitin, nuclear protein, signal transduction, signaling protein
Biological sourceHOMO SAPIENS (HUMAN)
Total number of polymer chains2
Total molecular weight17556.11
Authors
Komander, D.,Odenwaelder, P.,Barford, D. (deposition date: 2007-01-26, release date: 2008-02-05, Last modification date: 2011-07-13)
Primary citation
Komander, D.,Reyes-Turcu, F.,Licchesi, J.D.F.,Odenwaelder, P.,Wilkinson, K.D.,Barford, D.
Molecular Discrimination of Structurally Equivalent Lys 63-Linked and Linear Polyubiquitin Chains.
Embo Rep., 10:466-, 2009
PubMed: 19373254 (PDB entries with the same primary citation)
DOI: 10.1038/EMBOR.2009.55
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.95 Å)
NMR Information
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliers0.253805.9%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 2jf5
no rotation
Molmil generated image of 2jf5
rotated about x axis by 90°
Molmil generated image of 2jf5
rotated about y axis by 90°