PDB: 1507 件ウェブページステータス検索Chemie searchBIRD

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3TIX	Crystal structure of the Chp1-Tas3 complex core 分子名称: CHLORIDE ION, Chromo domain-containing protein 1, POTASSIUM ION, ... 著者 Schalch, T, Joshua-Tor, L. 登録日 2011-08-22 公開日 2011-11-16 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.9001 Å) 主引用文献 The Chp1-Tas3 core is a multifunctional platform critical for gene silencing by RITS. Nat.Struct.Mol.Biol., 18, 2011
3TBL	Structure of Mono-ubiquitinated PCNA: Implications for DNA Polymerase Switching and Okazaki Fragment Maturation 分子名称: Proliferating cell nuclear antigen, Ubiquitin 著者 Zhang, Z, Lee, M, Lee, E, Zhang, S. 登録日 2011-08-07 公開日 2012-05-23 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.903 Å) 主引用文献 Structure of monoubiquitinated PCNA: Implications for DNA polymerase switching and Okazaki fragment maturation. Cell Cycle, 11, 2012
2LGD	The high resolution structure of ubiquitin like domain of UBLCP1 分子名称: Ubiquitin-like domain-containing CTD phosphatase 1 著者 Lee, W, Ko, S. 登録日 2011-07-25 公開日 2012-08-29 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 The High Resolution Structure of Ubiquitin Like Dom Ublcp1 To be Published
3ZUN	pVHL54-213-EloB-EloC complex_(2S,4R)-4-hydroxy-1-(2-(3-methylisoxazol- 5-yl)acetyl)-N-(4-nitrobenzyl)pyrrolidine-2-carboxamide bound 分子名称: (4R)-N-[4-(DIHYDROXYAMINO)BENZYL]-4-HYDROXY-1-[(3-METHYLISOXAZOL-5-YL)ACETYL]-L-PROLINAMIDE, GLYCEROL, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, ... 著者 Van Molle, I, Buckley, D, Crews, C.M, Ciulli, A. 登録日 2011-07-19 公開日 2012-07-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Elongin-B, Elongin-C, Von Hippel-Lindau Disease Tumor Suppressor Complex To be Published
3ZTD	pVHL54-213-EloB-EloC complex _ methyl 4-(((2S,4R)-4-hydroxy-1-(2-(3- methylisoxazol-5-yl)acetyl)pyrrolidine-2-carboxamido)methyl)benzoate 分子名称: METHYL 4-[({(4R)-4-HYDROXY-1-[(3-METHYLISOXAZOL-5-YL)ACETYL]-L-PROLYL}AMINO)METHYL]BENZOATE, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2, ... 著者 VanMolle, I, Buckley, D.L, Crews, C.M, Ciulli, A. 登録日 2011-07-07 公開日 2012-07-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.79 Å) 主引用文献 Dissecting Fragment-Based Lead Discovery at the Von Hippel-Lindau Protein:Hypoxia Inducible Factor 1Alpha Protein-Protein Interface. Chem.Biol., 19, 2012
3ZTC	pVHL54-213-EloB-EloC complex _ (2S,4R)-N-((1,1'-biphenyl)-4-ylmethyl)- 4-hydroxy-1-(2-(3-methylisoxazol-5-yl)acetyl)pyrrolidine-2- carboxamide 分子名称: (4R)-N-(BIPHENYL-4-YLMETHYL)-4-HYDROXY-1-[(3-METHYLISOXAZOL-5-YL)ACETYL]-L-PROLINAMIDE, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2, ... 著者 Van Molle, I, Buckley, D.L, Crews, C.M, Ciulli, A. 登録日 2011-07-06 公開日 2012-07-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Dissecting Fragment-Based Lead Discovery at the Von Hippel-Lindau Protein:Hypoxia Inducible Factor 1Alpha Protein-Protein Interface. Chem.Biol., 19, 2012
3B1L	Crystal Structure of parkin ubiquitin-like domain R33Q mutant 分子名称: E3 ubiquitin-protein ligase parkin 著者 Tomoo, K, Ikemiya, A, Amami, Y, In, Y, Ishida, T. 登録日 2011-07-04 公開日 2012-07-04 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal Structure of parkin ubiquitin-like domain R33Q mutant to be published
3SHQ	Crystal Structure of UBLCP1 分子名称: MAGNESIUM ION, UBLCP1 著者 Xiao, J, Engel, J.L. 登録日 2011-06-16 公開日 2011-10-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.96 Å) 主引用文献 UBLCP1 is a 26S proteasome phosphatase that regulates nuclear proteasome activity. Proc.Natl.Acad.Sci.USA, 108, 2011
3ZRF	pVHL54-213-EloB-EloC complex_apo 分子名称: TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2, VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR, 著者 Van Molle, I, Buckley, D.L, Crews, C.M, Ciulli, A. 登録日 2011-06-16 公開日 2012-03-07 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Targeting the Von Hippel-Lindau E3 Ubiquitin Ligase Using Small Molecules to Disrupt the Vhl/Hif-1Alpha Interaction J.Am.Chem.Soc., 134, 2012
3ZRC	pVHL54-213-EloB-EloC complex (4R)-4-HYDROXY-1-[(3-METHYLISOXAZOL-5-YL)ACETYL]-N-[4-(1,3-OXAZOL-5-YL)BENZYL]-L-PROLINAMIDE bound 分子名称: (4R)-4-HYDROXY-1-[(3-METHYLISOXAZOL-5-YL)ACETYL]-N-[4-(1,3-OXAZOL-5-YL)BENZYL]-L-PROLINAMIDE, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 1, TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2, ... 著者 Van Molle, I, Buckley, D.L, Crews, C.M, Ciulli, A. 登録日 2011-06-15 公開日 2012-03-07 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Targeting the Von Hippel-Lindau E3 Ubiquitin Ligase Using Small Molecules to Disrupt the Vhl/Hif-1Alpha Interaction J.Am.Chem.Soc., 134, 2012
3SDL	Crystal structure of human ISG15 in complex with NS1 N-terminal region from influenza B virus, Northeast Structural Genomics Consortium Target IDs HX6481, HR2873, and OR2 分子名称: Non-structural protein 1, Ubiquitin-like protein ISG15 著者 Guan, R, Ma, L.-C, Krug, R.M, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2011-06-09 公開日 2011-07-20 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Structural basis for the sequence-specific recognition of human ISG15 by the NS1 protein of influenza B virus. Proc.Natl.Acad.Sci.USA, 108, 2011
3B08	Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin 分子名称: Polyubiquitin-C, RanBP-type and C3HC4-type zinc finger-containing protein 1, ZINC ION, ... 著者 Sato, Y, Fujita, H, Yoshikawa, A, Yamashita, M, Yamagata, A, Kaiser, S.E, Iwai, K, Fukai, S. 登録日 2011-06-07 公開日 2011-12-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.701 Å) 主引用文献 Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex Proc.Natl.Acad.Sci.USA, 108, 2011
3B0A	Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin 分子名称: Polyubiquitin-C, RanBP-type and C3HC4-type zinc finger-containing protein 1, TRIS(HYDROXYETHYL)AMINOMETHANE, ... 著者 Sato, Y, Fujita, H, Yoshikawa, A, Yamashita, M, Yamagata, A, Kaiser, S.E, Iwai, K, Fukai, S. 登録日 2011-06-07 公開日 2011-12-14 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex Proc.Natl.Acad.Sci.USA, 108, 2011
2LD9	Backbone Structure of Ubiquitin determined using Backbone amide NOEs and Backbone N-H and N-C RDCs 分子名称: Ubiquitin 著者 Kumar, D, Hosur, R. 登録日 2011-05-18 公開日 2011-06-08 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 AUTOBA: Automation of Backbone Assignment from HN(C)N Suite of Experiments To be Published
3RUL	New strategy to analyze structures of glycopeptide-target complexes 分子名称: 10-METHYLUNDECANOIC ACID, 2-amino-2-deoxy-beta-D-glucopyranuronic acid, CHLORIDE ION, ... 著者 Economou, N.J, Nahoum, V, Weeks, S.D, Grasty, K.C, Loll, P.J. 登録日 2011-05-05 公開日 2012-06-06 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 A carrier protein strategy yields the structure of dalbavancin. J.Am.Chem.Soc., 134, 2012
3RT3	Complex of influenza virus protein with host anti-viral factor 分子名称: Non-structural protein 1, SUCCINIC ACID, Ubiquitin-like protein ISG15 著者 Wang, X.Q, Li, L. 登録日 2011-05-03 公開日 2011-07-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.006 Å) 主引用文献 Crystal structure of human ISG15 in complex with influenza B virus NS1B To be Published
3AXC	Crystal structure of linear diubiquitin 分子名称: GLYCEROL, Ubiquitin 著者 Rohaim, A, Kawasaki, M, Kato, R, Dikic, I, Wakatsuki, S. 登録日 2011-04-01 公開日 2012-01-25 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Structure of a compact conformation of linear diubiquitin Acta Crystallogr.,Sect.D, 68, 2012
3R66	Crystal structure of human ISG15 in complex with NS1 N-terminal region from influenza virus B, Northeast Structural Genomics Consortium Target IDs HX6481, HR2873, and OR2 分子名称: Non-structural protein 1, Ubiquitin-like protein ISG15 著者 Guan, R, Ma, L.C, Krug, R.M, Montelione, G.T, Northeast Structural Genomics Consortium (NESG) 登録日 2011-03-21 公開日 2011-06-08 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The Structure of the complex of ISG15 and Influenza B virus NS1 Protein: implications for the mechanism of SN1-mediated inhibition of ISG15 conjugation To be Published
3AUL	Crystal structure of wild-type Lys48-linked diubiquitin in an open conformation 分子名称: Polyubiquitin-C 著者 Hirano, T, Olivier, S, Yagi, M, Takemoto, E, Hiromoto, T, Satoh, T, Mizushima, T, Kato, K. 登録日 2011-02-09 公開日 2011-09-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.39 Å) 主引用文献 Conformational dynamics of wild-type Lys48-linked diubiquitin in solution J.Biol.Chem., 286, 2011
3QHT	Crystal Structure of the Monobody ySMB-1 bound to yeast SUMO 分子名称: GLYCEROL, Monobody ySMB-1, Ubiquitin-like protein SMT3 著者 Koide, S, Gilbreth, R.N. 登録日 2011-01-26 公開日 2011-05-11 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Isoform-specific monobody inhibitors of small ubiquitin-related modifiers engineered using structure-guided library design. Proc.Natl.Acad.Sci.USA, 108, 2011
2Y5B	Structure of USP21 in complex with linear diubiquitin-aldehyde 分子名称: SULFATE ION, UBIQUITIN, UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21, ... 著者 Ye, Y, Akutsu, M, Reyes-Turcu, F, Enchev, R.I, Wilkinson, K.D, Komander, D. 登録日 2011-01-12 公開日 2012-01-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Polyubiquitin Binding and Cross-Reactivity in the Usp Domain Deubiquitinase Usp21. Embo Rep., 12, 2011
3Q3F	Engineering Domain-Swapped Binding Interfaces by Mutually Exclusive Folding: Insertion of Ubiquitin into position 103 of Barnase 分子名称: Ribonuclease/Ubiquitin chimeric protein, SULFATE ION 著者 Ha, J.-H, Karchin, J.M, Walker-Kopp, N, Huang, L.-S, Berry, E.A, Loh, S.N. 登録日 2010-12-21 公開日 2012-01-25 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.169 Å) 主引用文献 Engineering domain-swapped binding interfaces by mutually exclusive folding. J.Mol.Biol., 416, 2012
2L7R	Solution NMR structure of N-terminal Ubiquitin-like domain of FUBI, a ribosomal protein S30 precursor from Homo sapiens. NorthEast Structural Genomics consortium (NESG) target HR6166 分子名称: Ubiquitin-like protein FUBI 著者 Lemak, A, Yee, A, Houliston, S, Semesi, A, Doherty, R, Dhe-Paganon, S, Montelione, G.T, Arrowsmith, C, Northeast Structural Genomics Consortium (NESG), Structural Genomics Consortium (SGC) 登録日 2010-12-20 公開日 2011-01-05 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution NMR structure of N-terminal Ubiquitin-like domain of FUBI, a ribosomal protein S30 precursor from Homo sapiens. NorthEast Structural Genomics consortium (NESG) target HR6166 To be Published
3PT2	Structure of a viral OTU domain protease bound to Ubiquitin 分子名称: 1.7.6 3-bromanylpropan-1-amine, ACETATE ION, RNA polymerase, ... 著者 James, T.W, Bacik, J.P, Frias-Staheli, N, Garcia-Sastre, A, Mark, B.L. 登録日 2010-12-02 公開日 2011-01-19 最終更新日 2023-05-31 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for the removal of ubiquitin and interferon-stimulated gene 15 by a viral ovarian tumor domain-containing protease. Proc.Natl.Acad.Sci.USA, 108, 2011
3PTF	X-ray structure of the non-covalent complex between UbcH5A and Ubiquitin 分子名称: Polyubiquitin-B, Ubiquitin-conjugating enzyme E2 D1 著者 Bosanac, I, Hymowitz, S.G. 登録日 2010-12-02 公開日 2011-05-11 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Modulation of K11-Linkage Formation by Variable Loop Residues within UbcH5A. J.Mol.Biol., 408, 2011

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