3B08

Crystal structure of the mouse HOIL1-L-NZF in complex with linear di-ubiquitin

Summary for 3B08

Related3B0A
DescriptorPolyubiquitin-C, RanBP-type and C3HC4-type zinc finger-containing protein 1, ZINC ION, ... (5 entities in total)
Functional Keywordsprotein complex, signaling protein-metal binding protein complex, signaling protein/metal binding protein
Biological sourceHomo sapiens (human)
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Cellular locationUbiquitin: Cytoplasm (By similarity) P0CG48
Total number of polymer chains8
Total molecular weight98597.46
Authors
Sato, Y.,Fujita, H.,Yoshikawa, A.,Yamashita, M.,Yamagata, A.,Kaiser, S.E.,Iwai, K.,Fukai, S. (deposition date: 2011-06-07, release date: 2011-12-14, Last modification date: 2013-06-19)
Primary citation
Sato, Y.,Fujita, H.,Yoshikawa, A.,Yamashita, M.,Yamagata, A.,Kaiser, S.E.,Iwai, K.,Fukai, S.
Specific recognition of linear ubiquitin chains by the Npl4 zinc finger (NZF) domain of the HOIL-1L subunit of the linear ubiquitin chain assembly complex
Proc.Natl.Acad.Sci.USA, 108:20520-20525, 2011
PubMed: 22139374 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.1109088108
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.701 Å)
NMR Information
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers0.211602.6%1.4%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation report