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6WE3
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Human PARP14 (ARTD8), catalytic fragment in complex with compound 3
分子名称: 1,2-ETHANEDIOL, 2-{[(trans-4-hydroxycyclohexyl)sulfanyl]methyl}-8-methylquinazolin-4(3H)-one, DI(HYDROXYETHYL)ETHER, ...
著者Swinger, K.S, Schenkel, L.B, Kuntz, K.W.
登録日2020-04-01
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A potent and selective PARP14 inhibitor decreases protumor macrophage gene expression and elicits inflammatory responses in tumor explants.
Cell Chem Biol, 28, 2021
7UVM
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Crystal structure of human ClpP protease in complex with TR-27
分子名称: (10R)-4-[(4-chlorophenyl)methyl]-7-[(3-ethynylphenyl)methyl]-2,4,6,7,8,9-hexahydroimidazo[1,2-a]pyrido[3,4-e]pyrimidin-5(1H)-one, ATP-dependent Clp protease proteolytic subunit, mitochondrial
著者Mabanglo, M.F, Houry, W.A.
登録日2022-05-02
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Potent ClpP agonists with anticancer properties bind with improved structural complementarity and alter the mitochondrial N-terminome.
Structure, 31, 2023
6WE2
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Human PARP14 (ARTD8), catalytic fragment in complex with RBN012759
分子名称: 1,2-ETHANEDIOL, 7-(cyclopropylmethoxy)-5-fluoro-2-{[(trans-4-hydroxycyclohexyl)sulfanyl]methyl}quinazolin-4(3H)-one, Isoform 1 of Protein mono-ADP-ribosyltransferase PARP14
著者Swinger, K.K, Schenkel, L.B, Kuntz, K.W.
登録日2020-04-01
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献A potent and selective PARP14 inhibitor decreases protumor macrophage gene expression and elicits inflammatory responses in tumor explants.
Cell Chem Biol, 28, 2021
7UVN
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BU of 7uvn by Molmil
Crystal structure of human ClpP protease in complex with TR-57
分子名称: 3-({3-[(4-chlorophenyl)methyl]-1-methyl-2,4-dioxo-1,3,4,5,7,8-hexahydropyrido[4,3-d]pyrimidin-6(2H)-yl}methyl)benzonitrile, ATP-dependent Clp protease proteolytic subunit, mitochondrial
著者Mabanglo, M.F, Houry, W.A.
登録日2022-05-02
公開日2023-01-11
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.11 Å)
主引用文献Potent ClpP agonists with anticancer properties bind with improved structural complementarity and alter the mitochondrial N-terminome.
Structure, 31, 2023
6WLA
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BU of 6wla by Molmil
Antigen binding fragment of ch128.1
分子名称: Fab ch128.1 heavy chain, Fab ch128.1 light chain, GLYCEROL
著者Helguera, G, Rodriguez, J.A, Sawaya, M, Cascio, D, Zink, S, Ziegenbein, J, Short, C.
登録日2020-04-18
公開日2021-03-24
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Host receptor-targeted therapeutic approach to counter pathogenic New World mammarenavirus infections.
Nat Commun, 13, 2022
6WE4
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BU of 6we4 by Molmil
Human PARP14 (ARTD8), catalytic fragment in complex with compound 2
分子名称: 1,2-ETHANEDIOL, 2-methyl-3,5,6,7-tetrahydro-4H-cyclopenta[4,5]thieno[2,3-d]pyrimidin-4-one, 8-methyl-2-{[(pyridin-4-yl)sulfanyl]methyl}quinazolin-4(3H)-one, ...
著者Swinger, K.S, Schenkel, L.B, Kuntz, K.W.
登録日2020-04-01
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A potent and selective PARP14 inhibitor decreases protumor macrophage gene expression and elicits inflammatory responses in tumor explants.
Cell Chem Biol, 28, 2021
6X2L
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hEAAT3-IFS-Na
分子名称: Excitatory amino acid transporter 3
著者Qiu, B, Matthies, D, Boudker, O.
登録日2020-05-20
公開日2021-03-17
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Cryo-EM structures of excitatory amino acid transporter 3 visualize coupled substrate, sodium, and proton binding and transport.
Sci Adv, 7, 2021
6X2Z
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hEAAT3-OFS-Asp
分子名称: ASPARTIC ACID, Excitatory amino acid transporter 3, SODIUM ION
著者Qiu, B, Matthies, D, Boudker, O.
登録日2020-05-21
公開日2021-03-17
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Cryo-EM structures of excitatory amino acid transporter 3 visualize coupled substrate, sodium, and proton binding and transport.
Sci Adv, 7, 2021
5E6B
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BU of 5e6b by Molmil
Glucocorticoid receptor DNA binding domain - RELB NF-kB response element complex
分子名称: DNA (5'-D(*CP*CP*GP*GP*GP*GP*AP*AP*TP*TP*CP*CP*GP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*CP*GP*GP*AP*AP*TP*TP*CP*CP*CP*CP*GP*G)-3'), Glucocorticoid receptor, ...
著者Hudson, W.H, Rye, E.A, Herbst, A.G, Ortlund, E.A.
登録日2015-10-09
公開日2017-02-08
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Cryptic glucocorticoid receptor-binding sites pervade genomic NF-kappa B response elements.
Nat Commun, 9, 2018
4GSV
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BU of 4gsv by Molmil
Crystal Structure of the Ni2+2-Human Arginase I-ABH complex
分子名称: 2(S)-AMINO-6-BORONOHEXANOIC ACID, Arginase-1, NICKEL (II) ION
著者D'Antonio, E.L, Hai, Y, Christianson, D.W.
登録日2012-08-28
公開日2012-09-26
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structure and function of non-native metal clusters in human arginase I.
Biochemistry, 51, 2012
6X3E
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BU of 6x3e by Molmil
hEAAT3-Asymmetric-1o2i
分子名称: ASPARTIC ACID, Excitatory amino acid transporter 3, SODIUM ION
著者Qiu, B, Matthies, D, Boudker, O.
登録日2020-05-21
公開日2021-03-17
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.42 Å)
主引用文献Cryo-EM structures of excitatory amino acid transporter 3 visualize coupled substrate, sodium, and proton binding and transport.
Sci Adv, 7, 2021
6X3F
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BU of 6x3f by Molmil
hEAAT3-IFS-Apo
分子名称: CHOLINE ION, Excitatory amino acid transporter 3
著者Qiu, B, Matthies, D, Boudker, O.
登録日2020-05-21
公開日2021-03-17
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献Cryo-EM structures of excitatory amino acid transporter 3 visualize coupled substrate, sodium, and proton binding and transport.
Sci Adv, 7, 2021
5E7R
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BU of 5e7r by Molmil
Crystal structure of TL10-81 bound to TAK1-TAB1
分子名称: 2-chloro-N-{2-[(5-chloro-2-{[4-(4-methylpiperazin-1-yl)phenyl]amino}pyrimidin-4-yl)oxy]phenyl}acetamide, TAK1 kinase - TAB1 chimera fusion protein
著者Gurbani, D, Hunter, J.C, Tan, L, Chen, Z, Westover, K.D.
登録日2015-10-13
公開日2016-09-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Structure-guided development of covalent TAK1 inhibitors.
Bioorg. Med. Chem., 25, 2017
7B88
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BU of 7b88 by Molmil
Crystal structure of Retinoic Acid Receptor alpha (RXRA) in complexed with S99 inhibitor
分子名称: 3-[5-[3,5-bis(chloranyl)phenyl]-4-phenyl-1,3-oxazol-2-yl]propanoic acid, Nuclear receptor coactivator 2, Retinoic acid receptor RXR-alpha
著者Chaikuad, A, Schierle, S, Merk, D, Knapp, S, Structural Genomics Consortium (SGC)
登録日2020-12-12
公開日2021-01-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Oxaprozin Analogues as Selective RXR Agonists with Superior Properties and Pharmacokinetics.
J.Med.Chem., 64, 2021
7UI0
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BU of 7ui0 by Molmil
Post-fusion ectodomain of HSV-1 gB in complex with HSV010-13 Fab
分子名称: Envelope glycoprotein B, HSV10-13 Fab Heavy chain, HSV10-13 Light chain
著者Windsor, I.W, Kong, S.L, Garforth, S.J, Almo, S.C, Harrison, S.C.
登録日2022-03-28
公開日2023-02-08
最終更新日2023-02-15
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献A non-neutralizing glycoprotein B monoclonal antibody protects against herpes simplex virus disease in mice.
J.Clin.Invest., 133, 2023
7CAC
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BU of 7cac by Molmil
SARS-CoV-2 S trimer with one RBD in the open state and complexed with one H014 Fab.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of H014 Fab, ...
著者Zhe, L, Cao, L, Deng, Y, Sun, Y, Wang, N, Xie, L, Wang, Y, Rao, Z, Qin, C, Wang, X.
登録日2020-06-08
公開日2021-02-24
実験手法ELECTRON MICROSCOPY (3.55 Å)
主引用文献Structural basis for neutralization of SARS-CoV-2 and SARS-CoV by a potent therapeutic antibody.
Science, 369, 2020
5V62
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BU of 5v62 by Molmil
Phospho-ERK2 bound to bivalent inhibitor SBP3
分子名称: 5-(2-PHENYLPYRAZOLO[1,5-A]PYRIDIN-3-YL)-1H-PYRAZOLO[3,4-C]PYRIDAZIN-3-AMINE, GLYCEROL, Mitogen-activated protein kinase 1, ...
著者Lechtenberg, B.C, Riedl, S.J.
登録日2017-03-15
公開日2017-07-26
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure-Guided Strategy for the Development of Potent Bivalent ERK Inhibitors.
ACS Med Chem Lett, 8, 2017
7UHZ
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BU of 7uhz by Molmil
Post-fusion ectodomain of HSV-1 gB in complex with BMPC-23 Fab
分子名称: BMPC-23 Fab Heavy chain, BMPC-23 Fab Light chain, Envelope glycoprotein B
著者Windsor, I.W, Kong, S.L, Garforth, S.J, Almo, S.C, Harrison, S.C.
登録日2022-03-28
公開日2023-02-08
最終更新日2023-02-15
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献A non-neutralizing glycoprotein B monoclonal antibody protects against herpes simplex virus disease in mice.
J.Clin.Invest., 133, 2023
5EAF
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BU of 5eaf by Molmil
Saccharomyces cerevisiae CYP51 complexed with the plant pathogen inhibitor Fluquinconazole
分子名称: 3-(2,4-dichlorophenyl)-6-fluoranyl-2-(1,2,4-triazol-1-yl)quinazolin-4-one, Lanosterol 14-alpha demethylase, PROTOPORPHYRIN IX CONTAINING FE
著者Tyndall, J.D.A, Sabherwal, M, Sagatova, A.A, Keniya, M.V, Wilson, R.K, Woods, M.V, Monk, B.C.
登録日2015-10-16
公開日2016-02-10
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural and Functional Elucidation of Yeast Lanosterol 14 alpha-Demethylase in Complex with Agrochemical Antifungals.
PLoS ONE, 11, 2016
5WDF
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BU of 5wdf by Molmil
Crystal structure of 10E8v4-5R+100cF Fab in complex with HIV-1 gp41 peptide
分子名称: 10E8v4-5R+100cF Fab heavy chain, FA10E8v4-5R+100cF FAB light chain, HIV-1 gp41 peptide
著者Kwon, Y.D, Kwong, P.D.
登録日2017-07-05
公開日2018-03-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Surface-Matrix Screening Identifies Semi-specific Interactions that Improve Potency of a Near Pan-reactive HIV-1-Neutralizing Antibody.
Cell Rep, 22, 2018
5VB5
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BU of 5vb5 by Molmil
X-ray co-structure of nuclear receptor ROR-gammat Ligand Binding Domain with an inverse agonist and SRC2 peptide
分子名称: N-[(2R)-3-(4-{[3-(4-chlorophenyl)propanoyl]amino}phenyl)-1-(4-methylpiperidin-1-yl)-1-oxopropan-2-yl]-4-methylpentanamide, Nuclear receptor ROR-gamma, SRC2 chimera, ...
著者Li, X.
登録日2017-03-28
公開日2017-06-07
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.226 Å)
主引用文献Structural studies unravel the active conformation of apo ROR gamma t nuclear receptor and a common inverse agonism of two diverse classes of ROR gamma t inhibitors.
J. Biol. Chem., 292, 2017
4GZ2
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BU of 4gz2 by Molmil
Mus Musculus Tdp2 excluded ssDNA complex
分子名称: DNA (5'-D(*CP*AP*TP*CP*CP*GP*AP*AP*TP*TP*CP*G)-3'), FORMIC ACID, MAGNESIUM ION, ...
著者Schellenberg, M.J, Williams, R.S.
登録日2012-09-05
公開日2012-10-31
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanism of repair of 5'-topoisomerase II-DNA adducts by mammalian tyrosyl-DNA phosphodiesterase 2.
Nat.Struct.Mol.Biol., 19, 2012
4H2I
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Human ecto-5'-nucleotidase (CD73): crystal form III (closed) in complex with AMPCP
分子名称: 5'-nucleotidase, CALCIUM ION, CHLORIDE ION, ...
著者Straeter, N, Knapp, K.M, Zebisch, M, Pippel, J.
登録日2012-09-12
公開日2012-11-28
最終更新日2018-06-27
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of the Human Ecto-5'-Nucleotidase (CD73): Insights into the Regulation of Purinergic Signaling.
Structure, 20, 2012
4GZF
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Multi-drug resistant HIV-1 protease 769 variant with reduced LrF peptide
分子名称: LrF peptide, Protease
著者Dewdney, T.G, Wang, Y, Kovari, I.A, Brunzelle, J.S, Reiter, S.J, Kovari, L.C.
登録日2012-09-06
公開日2013-10-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Ligand modifications to reduce the relative resistance of multi-drug resistant HIV-1 protease.
Bioorg.Med.Chem., 21, 2013
5WGI
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BU of 5wgi by Molmil
Ultrahigh resolution crystal structure of Danio rerio histone deacetylase 6 catalytic domain 2 in complex with TSA
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Porter, N.J, Christianson, D.W.
登録日2017-07-14
公開日2017-12-06
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Unusual zinc-binding mode of HDAC6-selective hydroxamate inhibitors.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017

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