PDB: 114 件ウェブページステータス検索Chemie searchBIRD

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1SMW	Crystal Structure of Cp Rd L41A mutant in reduced state 2 (soaked) 分子名称: FE (II) ION, Rubredoxin 著者 Park, I.Y, Youn, B, Harley, J.L, Eidsness, M.K, Smith, E, Ichiye, T, Kang, C. 登録日 2004-03-09 公開日 2004-03-16 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 The unique hydrogen bonded water in the reduced form of Clostridium pasteurianum rubredoxin and its possible role in electron transfer J.BIOL.INORG.CHEM., 9, 2004
1BE7	CLOSTRIDIUM PASTEURIANUM RUBREDOXIN C42S MUTANT 分子名称: FE (III) ION, RUBREDOXIN 著者 Maher, M, Guss, J.M, Wilce, M, Wedd, A.G. 登録日 1998-05-20 公開日 1998-09-23 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 The Rubredoxin from Clostridium Pasteurianum: Mutation of the Iron Cysteinyl Ligands to Serine. Crystal and Molecular Structures of the Oxidised and Dithionite-Treated Forms of the Cys42Ser Mutant J.Am.Chem.Soc., 120, 1998
1T9Q	Crystal Structure of V44L Cp Rubredoxin 分子名称: FE (III) ION, Rubredoxin 著者 Park, I.Y, Eidsness, M.K, Lin, I.J, Gebel, E.B, Youn, B, Harley, J.L, Machonkin, T.E, Frederick, R.O, Markley, J.L, Smith, E.T, Ichiye, T, Kang, C. 登録日 2004-05-18 公開日 2004-10-05 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: Effects of side-chain size on reduction potential. Proteins, 57, 2004
1E8J	SOLUTION STRUCTURE OF DESULFOVIBRIO GIGAS ZINC RUBREDOXIN, NMR, 20 STRUCTURES 分子名称: RUBREDOXIN 著者 Lamosa, P, Brennan, L, Vis, H, Turner, D.L, Santos, H. 登録日 2000-09-21 公開日 2001-10-18 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 NMR structure of Desulfovibrio gigas rubredoxin: a model for studying protein stabilization by compatible solutes. Extremophiles, 5, 2001
6BD4	Crystal structure of human apo-Frizzled4 receptor 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Frizzled-4/Rubredoxin chimeric protein, OLEIC ACID, ... 著者 Yang, S, Wu, Y, Pu, M, Chen, Y, Dong, S, Guo, Y, Han, G.Y, Stevens, R.C, Zhao, S, Xu, F. 登録日 2017-10-21 公開日 2018-08-22 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal structure of the Frizzled 4 receptor in a ligand-free state. Nature, 560, 2018
7WSX	Class III hybrid cluster protein (HCP) C67Y variant from Methanothermobacter marburgensis 分子名称: FE-S-O HYBRID CLUSTER, Hydroxylamine reductase 著者 Fujishiro, T. 登録日 2022-02-02 公開日 2023-02-08 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Class III hybrid cluster protein homodimeric architecture shows evolutionary relationship with Ni, Fe-carbon monoxide dehydrogenases. Nat Commun, 14, 2023
8F6T	Cryo-EM structure of alkane 1-monooxygenase AlkB-AlkG complex from Fontimonas thermophila 分子名称: Alkane 1-monooxygenase, DODECANE, FE (III) ION 著者 Chai, J, Guo, G, McSweeney, S, Shanklin, J, Liu, Q. 登録日 2022-11-17 公開日 2023-04-05 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.76 Å) 主引用文献 Structural basis for enzymatic terminal C-H bond functionalization of alkanes. Nat.Struct.Mol.Biol., 30, 2023
7E0L	Class III hybrid cluster protein (HCP) from Methanothermobacter marburgensis 分子名称: FE (III) ION, FE-S-O HYBRID CLUSTER, Hydroxylamine reductase, ... 著者 Fujishiro, T. 登録日 2021-01-28 公開日 2022-02-02 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.82 Å) 主引用文献 Class III hybrid cluster protein homodimeric architecture shows evolutionary relationship with Ni, Fe-carbon monoxide dehydrogenases Nat Commun, 2023
2V3B	Crystal structure of the electron transfer complex rubredoxin - rubredoxin reductase from Pseudomonas aeruginosa. 分子名称: FE (III) ION, FLAVIN-ADENINE DINUCLEOTIDE, RUBREDOXIN 2, ... 著者 Hagelueken, G, Wiehlmann, L, Adams, T.M, Kolmar, H, Heinz, D.W, Tuemmler, B, Schubert, W.-D. 登録日 2007-06-14 公開日 2007-08-14 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 Crystal Structure of the Electron Transfer Complex Rubredoxin - Rubredoxin Reductase from Pseudomonas Aeruginosa. Proc.Natl.Acad.Sci.USA, 104, 2007
6LI2	Crystal structure of GPR52 ligand free form with rubredoxin fusion 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Chimera of G-protein coupled receptor 52 and Rubredoxin, DI(HYDROXYETHYL)ETHER, ... 著者 Luo, Z.P, Lin, X, Xu, F, Han, G.W. 登録日 2019-12-10 公開日 2020-02-26 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural basis of ligand recognition and self-activation of orphan GPR52. Nature, 579, 2020
4D02	The crystallographic structure of Flavorubredoxin from Escherichia coli 分子名称: ANAEROBIC NITRIC OXIDE REDUCTASE FLAVORUBREDOXIN, CHLORIDE ION, FE (III) ION, ... 著者 Romao, C.V, Vicente, J.B, Bandeiras, T, Carrondo, M.A, Teixeira, M, Frazao, C. 登録日 2014-04-23 公開日 2014-09-03 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.755 Å) 主引用文献 Structure of Escherichia Coli Flavodiiron Nitric Oxide Reductase. J.Mol.Biol., 428, 2016
4XNW	The human P2Y1 receptor in complex with MRS2500 分子名称: P2Y purinoceptor 1,Rubredoxin,P2Y purinoceptor 1, ZINC ION, [(1R,2S,4S,5S)-4-[2-iodo-6-(methylamino)-9H-purin-9-yl]-2-(phosphonooxy)bicyclo[3.1.0]hex-1-yl]methyl dihydrogen phosphate 著者 Zhang, D, Gao, Z, Jacobson, K, Han, G.W, Stevens, R, Zhao, Q, Wu, B, GPCR Network (GPCR) 登録日 2015-01-16 公開日 2015-04-01 最終更新日 2020-02-05 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Two disparate ligand-binding sites in the human P2Y1 receptor Nature, 520, 2015
7SUS	Crystal structure of Apelin receptor in complex with small molecule 分子名称: (1R,2S)-N-[4-(2,6-dimethoxyphenyl)-5-(6-methylpyridin-2-yl)-1,2,4-triazol-3-yl]-1-(5-methylpyrimidin-2-yl)-1-oxidanyl-propane-2-sulfonamide, (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Apelin receptor, ... 著者 Xu, F, Yue, Y, Liu, L.E, Han, G.W, Hanson, M. 登録日 2021-11-18 公開日 2022-07-27 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural insight into apelin receptor-G protein stoichiometry. Nat.Struct.Mol.Biol., 29, 2022
4XNV	The human P2Y1 receptor in complex with BPTU 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 1-[2-(2-tert-butylphenoxy)pyridin-3-yl]-3-[4-(trifluoromethoxy)phenyl]urea, CHOLESTEROL, ... 著者 Zhang, D, Gao, Z, Jacobson, K, Han, G.W, Stevens, R, Zhao, Q, Wu, B, GPCR Network (GPCR) 登録日 2015-01-16 公開日 2015-04-01 最終更新日 2020-02-05 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Two disparate ligand-binding sites in the human P2Y1 receptor Nature, 520, 2015
5UIW	Crystal Structure of CC Chemokine Receptor 5 (CCR5) in complex with high potency HIV entry inhibitor 5P7-CCL5 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, C-C chemokine receptor type 5,Rubredoxin chimera, C-C motif chemokine 5, ... 著者 Zheng, Y, Qin, L, Han, G.W, Gustavsson, M, Kawamura, T, Stevens, R.C, Cherezov, V, Kufareva, I, Handel, T.M. 登録日 2017-01-15 公開日 2017-06-28 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.204 Å) 主引用文献 Structure of CC Chemokine Receptor 5 with a Potent Chemokine Antagonist Reveals Mechanisms of Chemokine Recognition and Molecular Mimicry by HIV. Immunity, 46, 2017
5VBL	Structure of apelin receptor in complex with agonist peptide 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Apelin receptor,Rubredoxin,Apelin receptor Chimera, ZINC ION, ... 著者 Ma, Y, Yue, Y, Ma, Y, Zhang, Q, Zhou, Q, Song, Y, Shen, Y, Li, X, Ma, X, Li, C, Hanson, M.A, Han, G.W, Sickmier, E.A, Swaminath, G, Zhao, S, Stevems, R.C, Hu, L.A, Zhong, W, Zhang, M, Xu, F. 登録日 2017-03-29 公開日 2017-05-31 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural Basis for Apelin Control of the Human Apelin Receptor Structure, 25, 2017
5LMC	Oxidized flavodiiron core of Escherichia coli flavorubredoxin, including the Fe-4SG atoms from its rubredoxin domain 分子名称: ACETIC ACID, Anaerobic nitric oxide reductase flavorubredoxin, CACODYLATE ION, ... 著者 Romao, C.V, Borges, P.T, Vicente, J.B, Carrondo, M.A, Teixeira, M, Frazao, C. 登録日 2016-07-29 公開日 2016-10-19 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of Escherichia coli Flavodiiron Nitric Oxide Reductase. J.Mol.Biol., 428, 2016
7F1T	Crystal structure of the human chemokine receptor CCR5 in complex with MIP-1a 分子名称: C-C motif chemokine 3,C-C chemokine receptor type 5,Rubredoxin,C-C chemokine receptor type 5, ZINC ION 著者 Zhang, H, Chen, K, Tan, Q, Han, S, Zhu, Y, Zhao, Q, Wu, B. 登録日 2021-06-09 公開日 2021-07-14 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis for chemokine recognition and receptor activation of chemokine receptor CCR5. Nat Commun, 12, 2021
5LLD	Flavodiiron core of Escherichia coli flavorubredoxin in the reduced form. 分子名称: Anaerobic nitric oxide reductase flavorubredoxin, FE (III) ION, FLAVIN MONONUCLEOTIDE, ... 著者 Romao, C.V, Borges, P.T, Vicente, J.B, Carrondo, M.A, Teixeira, M, Frazao, C. 登録日 2016-07-27 公開日 2016-10-19 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.651 Å) 主引用文献 Structure of Escherichia coli Flavodiiron Nitric Oxide Reductase. J.Mol.Biol., 428, 2016
6GPS	CRYSTAL STRUCTURE OF CCR2A IN COMPLEX WITH MK-0812 分子名称: C-C chemokine receptor type 2,Rubredoxin,C-C chemokine receptor type 2, ZINC ION, [(3~{S},4~{S})-3-methoxyoxan-4-yl]-[(1~{R},3~{S})-3-propan-2-yl-3-[[3-(trifluoromethyl)-7,8-dihydro-5~{H}-1,6-naphthyridin-6-yl]carbonyl]cyclopentyl]azanium 著者 Pautsch, A, Schnapp, G. 登録日 2018-06-07 公開日 2019-01-02 最終更新日 2019-03-13 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Crystal Structure of CC Chemokine Receptor 2A in Complex with an Orthosteric Antagonist Provides Insights for the Design of Selective Antagonists. Structure, 27, 2019
6AKY	The Crystal structure of Human Chemokine Receptor CCR5 in complex with compound 34 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4,4-difluoro-N-[(1S)-3-{(3-exo)-3-[3-methyl-5-(propan-2-yl)-4H-1,2,4-triazol-4-yl]-8-azabicyclo[3.2.1]octan-8-yl}-1-(thiophen-3-yl)propyl]cyclohexane-1-carboxamide, C-C chemokine receptor type 5,Rubredoxin,C-C chemokine receptor type 5, ... 著者 Zhu, Y, Zhao, Q, Wu, B. 登録日 2018-09-04 公開日 2018-10-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure-Based Design of 1-Heteroaryl-1,3-propanediamine Derivatives as a Novel Series of CC-Chemokine Receptor 5 Antagonists. J. Med. Chem., 61, 2018
6GPX	CRYSTAL STRUCTURE OF CCR2A IN COMPLEX WITH MK-0812 分子名称: C-C chemokine receptor type 2,Rubredoxin,C-C chemokine receptor type 2, OLEIC ACID, ZINC ION, ... 著者 Pautsch, A, Schnapp, G, Cheng, R, Apel, A. 登録日 2018-06-07 公開日 2019-01-02 最終更新日 2019-03-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structure of CC Chemokine Receptor 2A in Complex with an Orthosteric Antagonist Provides Insights for the Design of Selective Antagonists. Structure, 27, 2019
6AKX	The Crystal structure of Human Chemokine Receptor CCR5 in complex with compound 21 分子名称: C-C chemokine receptor type 5,Rubredoxin,C-C chemokine receptor type 5, N-[(1S)-3-{(3-exo)-3-[3-methyl-5-(propan-2-yl)-4H-1,2,4-triazol-4-yl]-8-azabicyclo[3.2.1]octan-8-yl}-1-(thiophen-2-yl)propyl]cyclopentanecarboxamide, NITRATE ION, ... 著者 Zhu, Y, Zhao, Q, Wu, B. 登録日 2018-09-04 公開日 2018-10-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure-Based Design of 1-Heteroaryl-1,3-propanediamine Derivatives as a Novel Series of CC-Chemokine Receptor 5 Antagonists. J. Med. Chem., 61, 2018
4MBS	Crystal Structure of the CCR5 Chemokine Receptor 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4,4-difluoro-N-[(1S)-3-{(3-exo)-3-[3-methyl-5-(propan-2-yl)-4H-1,2,4-triazol-4-yl]-8-azabicyclo[3.2.1]oct-8-yl}-1-phenylpropyl]cyclohexanecarboxamide, Chimera protein of C-C chemokine receptor type 5 and Rubredoxin, ... 著者 Tan, Q, Zhu, Y, Han, G.W, Li, J, Fenalti, G, Liu, H, Cherezov, V, Stevens, R.C, GPCR Network (GPCR), Zhao, Q, Wu, B. 登録日 2013-08-19 公開日 2013-09-11 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 Structure of the CCR5 chemokine receptor-HIV entry inhibitor maraviroc complex. Science, 341, 2013
6IIU	Crystal structure of the human thromboxane A2 receptor bound to ramatroban 分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3-[(3R)-3-[(4-fluorophenyl)sulfonylamino]-1,2,3,4-tetrahydrocarbazol-9-yl]propanoic acid, CHOLESTEROL, ... 著者 Fan, H, Zhao, Q, Wu, B. 登録日 2018-10-07 公開日 2018-12-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for ligand recognition of the human thromboxane A2receptor. Nat. Chem. Biol., 15, 2019

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