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PDB: 35 results

4UAI
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Crystal structure of CXCL12 in complex with inhibitor
Descriptor: 1-phenyl-3-[4-(1H-tetrazol-5-yl)phenyl]urea, SULFATE ION, Stromal cell-derived factor 1
Authors:Smith, E.W, Chen, Y.
Deposit date:2014-08-09
Release date:2014-11-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Analysis of a Novel Small Molecule Ligand Bound to the CXCL12 Chemokine.
J.Med.Chem., 57, 2014
7UZX
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BU of 7uzx by Molmil
Staphylococcus epidermidis RP62a CRISPR effector subcomplex with non-self target RNA bound
Descriptor: CRISPR non-self RNA target, CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm4, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2022-08-17
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZW
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BU of 7uzw by Molmil
Staphylococcus epidermidis RP62a CRISPR effector subcomplex
Descriptor: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm4, CRISPR system single-strand-specific deoxyribonuclease Cas10/Csm1 (subtype III-A), ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2022-08-17
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7V00
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Staphylococcus epidermidis RP62a CRISPR tall effector complex with bound ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2022-08-17
Method:ELECTRON MICROSCOPY (3.87 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZZ
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BU of 7uzz by Molmil
Staphylococcus epidermidis RP62a CRISPR tall effector complex
Descriptor: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2022-08-17
Method:ELECTRON MICROSCOPY (4.45 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7UZY
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BU of 7uzy by Molmil
Staphylococcus epidermidis RP62A CRISPR effector complex with non-self target RNA 2
Descriptor: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2022-08-17
Method:ELECTRON MICROSCOPY (4.05 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7V02
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BU of 7v02 by Molmil
Staphylococcus epidermidis RP62A CRISPR short effector complex
Descriptor: CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, CRISPR system Cms protein Csm4, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2022-08-17
Method:ELECTRON MICROSCOPY (4.97 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
7V01
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BU of 7v01 by Molmil
Staphylococcus epidermidis RP62a CRISPR short effector complex with self RNA target and ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CRISPR system Cms endoribonuclease Csm3, CRISPR system Cms protein Csm2, ...
Authors:Smith, E.M, Ferrell, S.H, Tokars, V.L, Mondragon, A.
Deposit date:2022-05-09
Release date:2022-07-06
Last modified:2022-08-17
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Structures of an active type III-A CRISPR effector complex.
Structure, 30, 2022
5DEP
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BU of 5dep by Molmil
Structure of Pseudomonas aeruginosa LpxA in complex with UDP-GlcNAc
Descriptor: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, PHOSPHATE ION, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
Authors:Smith, E.W, Chen, Y.
Deposit date:2015-08-25
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structures of Pseudomonas aeruginosa LpxA Reveal the Basis for Its Substrate Selectivity.
Biochemistry, 54, 2015
5DG3
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BU of 5dg3 by Molmil
Structure of Pseudomonas aeruginosa LpxA in complex with UDP-3-O-(R-3-hydroxydecanoyl)-GlcNAc
Descriptor: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, PHOSPHATE ION, uridine-5'-diphosphate-3-O-(R-3-hydroxydecanoyl)-N-acetyl-D-glucosamine
Authors:Smith, E.W, Chen, Y.
Deposit date:2015-08-27
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of Pseudomonas aeruginosa LpxA Reveal the Basis for Its Substrate Selectivity.
Biochemistry, 54, 2015
5DEM
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BU of 5dem by Molmil
Structure of Pseudomonas aeruginosa LpxA
Descriptor: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, PHOSPHATE ION
Authors:Smith, E.W, Chen, Y.
Deposit date:2015-08-25
Release date:2015-09-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structures of Pseudomonas aeruginosa LpxA Reveal the Basis for Its Substrate Selectivity.
Biochemistry, 54, 2015
8FE5
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BU of 8fe5 by Molmil
Structure of J-PKAc chimera complexed with Aplithianine B
Descriptor: 6-[(6P)-6-(1-methyl-1H-imidazol-5-yl)-2,3-dihydro-4H-1,4-thiazin-4-yl]-7,9-dihydro-8H-purin-8-one, DnaJ homolog subfamily B member 1,cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
Authors:Du, L, Wilson, B.A.P, Li, N, Martinez Fiesco, J.A, Dalilian, M, Wang, D, Smith, E.A, Wamiru, A, Goncharova, E.I, Zhang, P, O'Keefe, B.R.
Deposit date:2022-12-05
Release date:2023-10-18
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Discovery and Synthesis of a Naturally Derived Protein Kinase Inhibitor that Selectively Inhibits Distinct Classes of Serine/Threonine Kinases.
J.Nat.Prod., 86, 2023
5N0G
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BU of 5n0g by Molmil
Crystal Structure of CobH T85A (precorrin-8x methyl mutase) complexed with C5 allyl-HBA
Descriptor: 3-[(1~{R},2~{S},3~{S},4~{Z},7~{S},8~{S},9~{Z},15~{R},17~{R},18~{R},19~{R})-2,7,18-tris(2-hydroxy-2-oxoethyl)-3,13,17-tris(3-hydroxy-3-oxopropyl)-1,2,7,12,12,15,17-heptamethyl-5-prop-2-enyl-3,8,15,18,19,21-hexahydrocorrin-8-yl]propanoic acid, GLYCEROL, Precorrin-8X methylmutase
Authors:Nemoto-Smith, E.H, Lawrence, A.D, Brown, D.G, Warren, M.J.
Deposit date:2017-02-02
Release date:2018-02-14
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Novel cobalamin analogues and their application in the trafficking of cobalamin in bacteria, worms and plants
To Be Published
5I2X
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BU of 5i2x by Molmil
Crystal Structure of TPP1 K170del
Descriptor: Adrenocortical dysplasia protein homolog
Authors:Nandakumar, J, Smith, E.
Deposit date:2016-02-09
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional consequences of a disease mutation in the telomere protein TPP1.
Proc.Natl.Acad.Sci.USA, 113, 2016
8FEC
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BU of 8fec by Molmil
Structure of J-PKAc chimera complexed with Aplithianine derivative
Descriptor: 6-[(6P)-6-(4-bromo-1-methyl-1H-imidazol-5-yl)-2,3-dihydro-4H-1,4-thiazin-4-yl]-7H-purine, DnaJ homolog subfamily B member 1,cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase inhibitor alpha
Authors:Du, L, Wilson, B.A.P, Li, N, Martinez Fiesco, J.A, Dalilian, M, Wang, D, Smith, E.A, Wamiru, A, Goncharova, E.I, Zhang, P, O'Keefe, B.R.
Deposit date:2022-12-06
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structures of J-PKAc chimera complexed with Aplithianine and derivatives
To Be Published
8FE2
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BU of 8fe2 by Molmil
Structure of J-PKAc chimera complexed with Aplithianine A
Descriptor: 6-[(6M)-6-(1-methyl-1H-imidazol-5-yl)-2,3-dihydro-4H-1,4-thiazin-4-yl]-9H-purine, DnaJ homolog subfamily B member 1, cAMP-dependent protein kinase catalytic subunit alpha, ...
Authors:Du, L, Wilson, B.A.P, Li, N, Dalilian, M, Wang, D, Martinez Fiesco, J.A, Smith, E.A, Wamiru, A, Goncharova, E.I, Zhang, P, O'Keefe, B.R.
Deposit date:2022-12-05
Release date:2023-10-18
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structures of J-PKAc chimera complexed with Aplithianine and derivatives
To Be Published
7UUW
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BU of 7uuw by Molmil
Cryogenic electron microscopy 3D map of F-actin bound by the Actin Binding Domain of alpha-catenin ortholog, HMP1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Rangarajan, E.S, Smith, E.W, Izard, T.
Deposit date:2022-04-29
Release date:2023-01-18
Last modified:2023-01-25
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:The nematode alpha-catenin ortholog, HMP1, has an extended alpha-helix when bound to actin filaments.
J.Biol.Chem., 299, 2022
7UTJ
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BU of 7utj by Molmil
Cryogenic electron microscopy 3D map of F-actin bound by human dimeric alpha-catenin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Rangarajan, E.S, Smith, E.W, Izard, T.
Deposit date:2022-04-27
Release date:2023-03-08
Last modified:2023-03-29
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Distinct inter-domain interactions of dimeric versus monomeric alpha-catenin link cell junctions to filaments.
Commun Biol, 6, 2023
7UXF
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BU of 7uxf by Molmil
Cryogenic electron microscopy 3D map of F-actin
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
Authors:Rangarajan, E.S, Smith, E.W, Izard, T.
Deposit date:2022-05-05
Release date:2023-03-08
Last modified:2023-03-29
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Distinct inter-domain interactions of dimeric versus monomeric alpha-catenin link cell junctions to filaments.
Commun Biol, 6, 2023
5I2Y
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BU of 5i2y by Molmil
Crystal Structure of TPP1 K170A
Descriptor: Adrenocortical dysplasia protein homolog
Authors:Nandakumar, J, Smith, E.M.
Deposit date:2016-02-09
Release date:2016-11-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural and functional consequences of a disease mutation in the telomere protein TPP1.
Proc.Natl.Acad.Sci.USA, 113, 2016
1T9P
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BU of 1t9p by Molmil
Crystal Structure of V44A, G45P Cp Rubredoxin
Descriptor: FE (III) ION, Rubredoxin
Authors:Park, I.Y, Eidsness, M.K, Lin, I.J, Gebel, E.B, Youn, B, Harley, J.L, Machonkin, T.E, Frederick, R.O, Markley, J.L, Smith, E.T, Ichiye, T, Kang, C.
Deposit date:2004-05-18
Release date:2004-10-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: Effects of side-chain size on reduction potential.
Proteins, 57, 2004
1T9O
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BU of 1t9o by Molmil
Crystal Structure of V44G Cp Rubredoxin
Descriptor: FE (III) ION, Rubredoxin
Authors:Park, I.Y, Eidsness, M.K, Lin, I.J, Gebel, E.B, Youn, B, Harley, J.L, Machonkin, T.E, Frederick, R.O, Markley, J.L, Smith, E.T, Ichiye, T, Kang, C.
Deposit date:2004-05-18
Release date:2004-10-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: Effects of side-chain size on reduction potential.
Proteins, 57, 2004
1T9Q
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BU of 1t9q by Molmil
Crystal Structure of V44L Cp Rubredoxin
Descriptor: FE (III) ION, Rubredoxin
Authors:Park, I.Y, Eidsness, M.K, Lin, I.J, Gebel, E.B, Youn, B, Harley, J.L, Machonkin, T.E, Frederick, R.O, Markley, J.L, Smith, E.T, Ichiye, T, Kang, C.
Deposit date:2004-05-18
Release date:2004-10-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic studies of V44 mutants of Clostridium pasteurianum rubredoxin: Effects of side-chain size on reduction potential.
Proteins, 57, 2004
5EKI
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BU of 5eki by Molmil
Crystal Structure of Truncated CCL21
Descriptor: C-C motif chemokine 21, SULFATE ION
Authors:Lewandowski, E.M, Smith, E.W, Chen, Y.
Deposit date:2015-11-03
Release date:2016-10-05
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic Structure of Truncated CCL21 and the Putative Sulfotyrosine-Binding Site.
Biochemistry, 55, 2016
3UUO
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BU of 3uuo by Molmil
The discovery of potent, selectivity, and orally bioavailable pyrozoloquinolines as PDE10 inhibitors for the treatment of Schizophrenia
Descriptor: 6-methoxy-3,8-dimethyl-4-(piperazin-1-yl)-1H-pyrazolo[3,4-b]quinoline, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Ho, G.D, Yang, S, Smotryski, J, Bercovici, A, Nechuta, T, Smith, E.M, McElroy, W, Tan, Z, Tulshian, D, Mckittrick, B, Greenlee, W.J, Hruza, A, Xiao, L, Rindgen, D, Guzzi, M, Zhang, X, Bleickardt, C, Mullins, D, Hodgson, R.
Deposit date:2011-11-28
Release date:2012-01-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:The discovery of potent, selective, and orally active pyrazoloquinolines as PDE10A inhibitors for the treatment of Schizophrenia.
Bioorg.Med.Chem.Lett., 22, 2012

 

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