PDB: 71589 件ウェブページステータス検索Chemie searchBIRD

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6WH3	Capsid structure of Penaeus monodon metallodensovirus at pH 8.2 分子名称: CALCIUM ION, Penaeus monodon metallodensovirus major capsid protein 著者 Penzes, J.J, Pham, H.T, Chipman, P, Bhattacharya, N, McKenna, R, Agbandje-McKenna, M, Tijssen, P. 登録日 2020-04-07 公開日 2020-04-22 最終更新日 2024-03-06 実験手法 ELECTRON MICROSCOPY (2.96 Å) 主引用文献 Molecular biology and structure of a novel penaeid shrimp densovirus elucidate convergent parvoviral host capsid evolution. Proc.Natl.Acad.Sci.USA, 117, 2020
1SYI	X-RAY STRUCTURE OF THE Y702F MUTANT OF THE GLUR2 LIGAND-BINDING CORE (S1S2J) IN COMPLEX WITH (S)-CPW399 AT 2.1 A RESOLUTION. 分子名称: (S)-2-AMINO-3-(1,3,5,7-PENTAHYDRO-2,4-DIOXO-CYCLOPENTA[E]PYRIMIDIN-1-YL) PROIONIC ACID, Glutamate receptor 2 著者 Frandsen, A, Pickering, D.S, Vestergaard, B, Kasper, C, Nielsen, B.B, Greenwood, J.R, Campiani, G, Gajhede, M, Schousboe, A, Kastrup, J.S. 登録日 2004-04-01 公開日 2005-03-22 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Tyr702 Is an Important Determinant of Agonist Binding and Domain Closure of the Ligand-Binding Core of GluR2. Mol.Pharmacol., 67, 2005
6TLB	Plasmodium falciparum lipocalin (PF3D7_0925900) 分子名称: GLYCEROL, SODIUM ION, Serine/threonine protein kinase 著者 Burda, P.C, Crosskey, T.D, Lauk, K, Wilmanns, M, Gilberger, T.W. 登録日 2019-12-02 公開日 2020-06-24 最終更新日 2024-01-24 実験手法 SOLUTION SCATTERING (2.85 Å), X-RAY DIFFRACTION 主引用文献 Structure-Based Identification and Functional Characterization of a Lipocalin in the Malaria Parasite Plasmodium falciparum. Cell Rep, 31, 2020
8DDH	Racemic mixture of FYF peptide reveals rippled beta-sheet 分子名称: PHE-TYR-PHE 著者 Sawaya, M.R, Hazari, A, Eisenberg, D.E. 登録日 2022-06-18 公開日 2022-09-28 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey. Chem Sci, 13, 2022
8DDF	Quasi-racemic mixture of L-FWF and D-FYF peptide reveals rippled beta-sheet 分子名称: 1,1,1,3,3,3-hexafluoropropan-2-ol, DPN-DTY-DPN, PHE-TRP-PHE 著者 Sawaya, M.R, Hazari, A, Eisenberg, D.E. 登録日 2022-06-18 公開日 2022-09-28 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 The rippled beta-sheet layer configuration-a novel supramolecular architecture based on predictions by Pauling and Corey. Chem Sci, 13, 2022
6QPB	Cryo-EM structure of calcium-free mTMEM16F lipid scramblase in digitonin 分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Anoctamin-6 著者 Alvadia, C, Lim, N.K, Clerico Mosina, V, Oostergetel, G.T, Dutzler, R, Paulino, C. 登録日 2019-02-13 公開日 2019-03-06 最終更新日 2019-03-20 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Cryo-EM structures and functional characterization of the murine lipid scramblase TMEM16F. Elife, 8, 2019
6QNO	Rhodopsin-Gi protein complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab antibody fragment heavy chain, Fab antibody fragment light chain, ... 著者 Tsai, C.-J, Marino, J, Adaixo, R.J, Pamula, F, Muehle, J, Maeda, S, Flock, T, Taylor, N.M.I, Mohammed, I, Matile, H, Dawson, R.J.P, Deupi, X, Stahlberg, H, Schertler, G.F.X. 登録日 2019-02-11 公開日 2019-07-10 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (4.38 Å) 主引用文献 Cryo-EM structure of the rhodopsin-G alpha i-beta gamma complex reveals binding of the rhodopsin C-terminal tail to the G beta subunit. Elife, 8, 2019
6QM8	Leishmania tarentolae proteasome 20S subunit apo structure 分子名称: Proteasome alpha1 chain, Proteasome alpha2 chain, Proteasome alpha3 chain, ... 著者 Rowland, P, Goswami, P. 登録日 2019-02-01 公開日 2019-04-17 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Preclinical candidate for the treatment of visceral leishmaniasis that acts through proteasome inhibition. Proc.Natl.Acad.Sci.USA, 116, 2019
6QTY	Non-phosphorylated human CLK1 in complex with an indole inhibitor to 1.65 Ang 分子名称: Dual specificity protein kinase CLK1, ethyl 3-[(E)-2-amino-1-cyanoethenyl]-6,7-dichloro-1-methyl-1H-indole-2-carboxylate 著者 Livnah, O, Domovich, Y. 登録日 2019-02-26 公開日 2020-03-18 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Expression, purification and crystallization of CLK1 kinase - A potential target for antiviral therapy. Protein Expr.Purif., 176, 2020
6QM7	Leishmania tarentolae proteasome 20S subunit complexed with GSK3494245 分子名称: Proteasome alpha1 chain, Proteasome alpha2 chain, Proteasome alpha3 chain, ... 著者 Rowland, P, Goswami, P. 登録日 2019-02-01 公開日 2019-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 Preclinical candidate for the treatment of visceral leishmaniasis that acts through proteasome inhibition. Proc.Natl.Acad.Sci.USA, 116, 2019
8TLN	STRUCTURAL COMPARISON SUGGESTS THAT THERMOLYSIN AND RELATED NEUTRAL PROTEASES UNDERGO HINGE-BENDING MOTION DURING CATALYSIS 分子名称: CALCIUM ION, DIMETHYL SULFOXIDE, LYSINE, ... 著者 Tronrud, D, Matthews, B.W. 登録日 1993-09-01 公開日 1994-04-30 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural comparison suggests that thermolysin and related neutral proteases undergo hinge-bending motion during catalysis. Biochemistry, 31, 1992
6QP6	Cryo-EM structure of calcium-bound mTMEM16F lipid scramblase in digitonin 分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Anoctamin-6, CALCIUM ION 著者 Alvadia, C, Lim, N.K, Clerico Mosina, V, Oostergetel, G.T, Dutzler, R, Paulino, C. 登録日 2019-02-13 公開日 2019-03-06 最終更新日 2019-04-03 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structures and functional characterization of the murine lipid scramblase TMEM16F. Elife, 8, 2019
6QPI	Cryo-EM structure of calcium-free mTMEM16F lipid scramblase in nanodisc 分子名称: Anoctamin-6 著者 Alvadia, C, Lim, N.K, Clerico Mosina, V, Oostergetel, G.T, Dutzler, R, Paulino, C. 登録日 2019-02-14 公開日 2019-03-06 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Cryo-EM structures and functional characterization of the murine lipid scramblase TMEM16F. Elife, 8, 2019
3ZHX	Structure of Mycobacterium tuberculosis DXR in complex with a fosmidomycin analogue 分子名称: 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE, MANGANESE (II) ION, [(1S)-1-(3,4-dichlorophenyl)-3-[oxidanyl(phenylcarbonyl)amino]propyl]phosphonic acid 著者 Bjorkelid, C, Jansson, A.M, Bergfors, T, Unge, T, Mowbray, S.L, Jones, T.A. 登録日 2012-12-30 公開日 2013-10-09 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Dxr Inhibition by Potent Mono- and Disubstituted Fosmidomycin Analogues. J.Med.Chem., 56, 2013
6GV5	Characterization of extracellular matrix binding protein- (Embp)-mediated Staphylococcus epidermidis adherence to fibronectin 分子名称: Hyperosmolarity resistance protein Emb 著者 Buettner, H, Rohde, H, Perbandt, M. 登録日 2018-06-20 公開日 2019-07-03 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 A Giant Extracellular Matrix Binding Protein of Staphylococcus epidermidis Binds Surface-Immobilized Fibronectin via a Novel Mechanism. Mbio, 11, 2020
6QPC	Cryo-EM structure of calcium-bound mTMEM16F lipid scramblase in nanodisc 分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Anoctamin-6, CALCIUM ION 著者 Alvadia, C, Lim, N.K, Clerico Mosina, V, Oostergetel, G.T, Dutzler, R, Paulino, C. 登録日 2019-02-13 公開日 2019-03-06 最終更新日 2019-04-03 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 Cryo-EM structures and functional characterization of the murine lipid scramblase TMEM16F. Elife, 8, 2019
7UOC	Crystal structure of Orobanche minor KAI2d4 分子名称: CHLORIDE ION, KAI2d4 著者 Burger, M, Chory, J. 登録日 2022-04-12 公開日 2023-04-19 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 A Divergent Clade KAI2 Protein in the Root Parasitic Plant Orobanche minor Is a Highly Sensitive Strigolactone Receptor and Is Involved in the Perception of Sesquiterpene Lactones. Plant Cell.Physiol., 64, 2023
6KU2	The structure of EanB/Y353A complex with ergothioneine covalent linked with persulfide Cys412 分子名称: 1,2-ETHANEDIOL, BROMIDE ION, CHLORIDE ION, ... 著者 Wu, L, Liu, P.H, Zhou, J.H. 登録日 2019-08-30 公開日 2020-08-26 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Single-Step Replacement of an Unreactive C-H Bond by a C-S Bond Using Polysulfide as the Direct Sulfur Source in the Anaerobic Ergothioneine Biosynthesis Acs Catalysis, 10, 2020
6GV8	Characterization of extracellular matrix binding protein- (Embp)-mediated Staphylococcus epidermidis adherence to fibronectin 分子名称: Hyperosmolarity resistance protein Emb 著者 Buettner, H, Rohde, H, Perbandt, M. 登録日 2018-06-20 公開日 2019-07-03 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.394 Å) 主引用文献 A Giant Extracellular Matrix Binding Protein of Staphylococcus epidermidis Binds Surface-Immobilized Fibronectin via a Novel Mechanism. Mbio, 11, 2020
7LM8	Crystal structure of SARS-CoV-2 spike protein receptor-binding domain in complex with two cross-neutralizing antibodies CV38-142 and COVA1-16 Fabs isolated from COVID-19 patients 分子名称: 1,2-ETHANEDIOL, COVA1-16 Fab heavy chain, COVA1-16 Fab light chain, ... 著者 Liu, H, Wilson, I.A. 登録日 2021-02-05 公開日 2021-03-31 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.936 Å) 主引用文献 A combination of cross-neutralizing antibodies synergizes to prevent SARS-CoV-2 and SARS-CoV pseudovirus infection. Cell Host Microbe, 29, 2021
4A2Z	CRYSTAL STRUCTURE OF LEISHMANIA MAJOR N-MYRISTOYLTRANSFERASE (NMT) WITH BOUND MYRISTOYL-COA AND A PYRAZOLE SULPHONAMIDE LIGAND 分子名称: 4-METHOXY-2,3,6-TRIMETHYL-N-(1,3,5-TRIMETHYL-1H-PYRAZOL-4-YL)BENZENESULFONAMIDE, CHLORIDE ION, GLYCEROL, ... 著者 Robinson, D.A, Brand, S, Fairlamb, A.H, Ferguson, M.A.J, Frearson, J.A, Wyatt, P.G. 登録日 2011-09-29 公開日 2011-12-21 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.31 Å) 主引用文献 Discovery of a novel class of orally active trypanocidal N-myristoyltransferase inhibitors. J. Med. Chem., 55, 2012
8FWI	Structure of dodecameric KaiC-RS-S413E/S414E solved by cryo-EM 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein KaiC, ... 著者 Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D. 登録日 2023-01-22 公開日 2023-03-22 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 From primordial clocks to circadian oscillators. Nature, 616, 2023
8FWJ	Structure of dodecameric KaiC-RS-S413E/S414E complexed with KaiB-RS solved by cryo-EM 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Circadian clock protein KaiB, ... 著者 Padua, R.A.P, Grant, T, Pitsawong, W, Hoemberger, M.S, Otten, R, Bradshaw, N, Grigorieff, N, Kern, D. 登録日 2023-01-22 公開日 2023-03-22 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 From primordial clocks to circadian oscillators. Nature, 616, 2023
7M4O	Crystal structure of phosphorylated RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin 分子名称: 2-(2-METHOXYETHOXY)ETHANOL, E3 ubiquitin-protein ligase RNF216, GLYCEROL, ... 著者 Cotton, T.R, Lechtenberg, B.C. 登録日 2021-03-21 公開日 2022-01-05 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216. Mol.Cell, 82, 2022
1TIB	CONFORMATIONAL LABILITY OF LIPASES OBSERVED IN THE ABSENCE OF AN OIL-WATER INTERFACE: CRYSTALLOGRAPHIC STUDIES OF ENZYMES FROM THE FUNGI HUMICOLA LANUGINOSA AND RHIZOPUS DELEMAR 分子名称: LIPASE 著者 Derewenda, U, Swenson, L, Wei, Y, Derewenda, Z.S. 登録日 1993-12-06 公開日 1995-01-26 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Conformational lability of lipases observed in the absence of an oil-water interface: crystallographic studies of enzymes from the fungi Humicola lanuginosa and Rhizopus delemar. J.Lipid Res., 35, 1994

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