PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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6L8J	Crystal structure of CYP97A3 mutant S290D/W300L/S304V in complex with retinal 分子名称: PROTOPORPHYRIN IX CONTAINING FE, Protein LUTEIN DEFICIENT 5, chloroplastic, ... 著者 Niu, G, Guo, Q, Liu, L. 登録日 2019-11-06 公開日 2020-06-10 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.399 Å) 主引用文献 Structural basis for plant lutein biosynthesis from alpha-carotene. Proc.Natl.Acad.Sci.USA, 117, 2020
7SA4	Damaged 70S ribosome with PrfH bound 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Tian, Y, Zeng, F, Raybarman, A, Carruthers, A, Li, Q, Fatma, S, Huang, R.H. 登録日 2021-09-22 公開日 2022-08-03 最終更新日 2025-03-19 実験手法 ELECTRON MICROSCOPY (2.55 Å) 主引用文献 Sequential rescue and repair of stalled and damaged ribosome by bacterial PrfH and RtcB. Proc.Natl.Acad.Sci.USA, 119, 2022
5XOT	Crystal structure of pHLA-B35 in complex with TU55 T cell receptor 分子名称: An HIV reverse transcriptase epitope, Beta-2-microglobulin, GLYCEROL, ... 著者 Shi, Y, Qi, J, Gao, G.F. 登録日 2017-05-31 公開日 2017-06-14 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.787 Å) 主引用文献 Conserved V delta 1 Binding Geometry in a Setting of Locus-Disparate pHLA Recognition by delta / alpha beta T Cell Receptors (TCRs): Insight into Recognition of HIV Peptides by TCRs. J. Virol., 91, 2017
5XOS	Crystal structure of HLA-B35 in complex with a pepetide antigen 分子名称: An HIV reverse transcriptase epitope, Beta-2-microglobulin, HLA class I histocompatibility antigen, ... 著者 Shi, Y, Qi, J, Gao, G.F. 登録日 2017-05-31 公開日 2017-06-14 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.697 Å) 主引用文献 Conserved V delta 1 Binding Geometry in a Setting of Locus-Disparate pHLA Recognition by delta / alpha beta T Cell Receptors (TCRs): Insight into Recognition of HIV Peptides by TCRs. J. Virol., 91, 2017
5O3Y	SOD1 bound to Ebsulfur 分子名称: SULFATE ION, Superoxide dismutase [Cu-Zn], ZINC ION, ... 著者 Capper, M.J, Wright, G.S.A, Antonyuk, S.V, Hasnain, S.S. 登録日 2017-05-25 公開日 2018-06-13 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 The cysteine-reactive small molecule ebselen facilitates effective SOD1 maturation. Nat Commun, 9, 2018
6ZG0	SARM1 SAM1-2 domains 分子名称: 1,2-ETHANEDIOL, BETA-MERCAPTOETHANOL, DI(HYDROXYETHYL)ETHER, ... 著者 Sporny, M, Guez-Haddad, J, Khazma, T, Yaron, A, Dessau, M, Mim, C, Isupov, M.N, Zalk, R, Hons, M, Opatowsky, Y. 登録日 2020-06-18 公開日 2020-11-11 最終更新日 2025-04-09 実験手法 ELECTRON MICROSCOPY (7.7 Å) 主引用文献 Structural basis for SARM1 inhibition and activation under energetic stress. Elife, 9, 2020
5XTW	Crystal structure of the CysR-CTLD2 fragment of human MR at acidic pH 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Macrophage mannose receptor 1 著者 He, Y, Hu, Z. 登録日 2017-06-21 公開日 2017-12-27 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural Insights into the pH-Dependent Conformational Change and Collagen Recognition of the Human Mannose Receptor Structure, 26, 2018
5XI9	Solution structure for human HSP70 substrate binding domain 分子名称: Heat shock 70 kDa protein 1A 著者 Hoshikawa, M, Tochio, N, Tate, S. 登録日 2017-04-26 公開日 2018-05-16 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Substrate Binding Switches the Conformation at the Lynchpin Site in the Substrate-Binding Domain of Human Hsp70 to Enable Allosteric Interdomain Communication. Molecules, 23, 2018
5XIR	Solution structure for human HSP70 substrate binding domain L542Y mutant 分子名称: Heat shock 70 kDa protein 1A 著者 Hoshikawa, M, Tochio, N, Tate, S. 登録日 2017-04-27 公開日 2018-05-16 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Substrate Binding Switches the Conformation at the Lynchpin Site in the Substrate-Binding Domain of Human Hsp70 to Enable Allosteric Interdomain Communication. Molecules, 23, 2018
5Y50	Crystal structure of eukaryotic MATE transporter AtDTX14 分子名称: Protein DETOXIFICATION 14 著者 Miyauchi, H, Kusakizako, T, Nishizawa, T, Ishitani, R, Nureki, O. 登録日 2017-08-06 公開日 2017-12-06 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural basis for xenobiotic extrusion by eukaryotic MATE transporter Nat Commun, 8, 2017
6ZJD	Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, GTP:AMP phosphotransferase AK3, ... 著者 Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E. 登録日 2020-06-28 公開日 2020-09-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structural Basis for GTP versus ATP Selectivity in the NMP Kinase AK3. Biochemistry, 59, 2020
6L7Z	Solution NMR structure of the N-terminal immunoglobulin variable domain of BTNL2 分子名称: Butyrophilin-like protein 2 著者 Basak, A.J, Lee, W, Samanta, D, De, S. 登録日 2019-11-03 公開日 2020-10-14 最終更新日 2024-11-06 実験手法 SOLUTION NMR 主引用文献 Structural Insights into N-terminal IgV Domain of BTNL2, a T Cell Inhibitory Molecule, Suggests a Non-canonical Binding Interface for Its Putative Receptors. J.Mol.Biol., 432, 2020
6ZJB	Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor Gp5A 分子名称: GTP:AMP phosphotransferase AK3, mitochondrial, MAGNESIUM ION, ... 著者 Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E. 登録日 2020-06-28 公開日 2020-09-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.822 Å) 主引用文献 Structural Basis for GTP versus ATP Selectivity in the NMP Kinase AK3. Biochemistry, 59, 2020
6LOG	Crystal structure of human CCL5-12AAA14 mutant 分子名称: C-C motif chemokine 5 著者 Chen, Y.C, Li, J.Y, Huang, C.H, Sue, S.C. 登録日 2020-01-05 公開日 2020-03-18 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 N-terminal Backbone Pairing Shifts in CCL5- 12 AAA 14 Dimer Interface: Structural Significance of the FAY Sequence. Int J Mol Sci, 21, 2020
5NBM	Crystal structure of the Arp4-N-actin(ATP-state) heterodimer bound by a nanobody 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, Actin-related protein 4, ... 著者 Knoll, K.R, Eustermann, S, Hopfner, K.P. 登録日 2017-03-02 公開日 2018-08-22 最終更新日 2025-04-09 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 The nuclear actin-containing Arp8 module is a linker DNA sensor driving INO80 chromatin remodeling. Nat. Struct. Mol. Biol., 25, 2018
6ME0	Structure of a group II intron retroelement prior to DNA integration 分子名称: MAGNESIUM ION, Maturase reverse transcriptase, SODIUM ION, ... 著者 Haack, D, Yan, X, Zhang, C, Hingey, J, Lyumkis, D, Baker, T.S, Toor, N. 登録日 2018-09-05 公開日 2019-08-14 最終更新日 2024-03-13 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Cryo-EM Structures of a Group II Intron Reverse Splicing into DNA. Cell, 178, 2019
9H8B	Ex vivo cannulae fiber structure of Pyrodictium abyssi 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CanX 著者 Sleutel, M, Remaut, H. 登録日 2024-10-28 公開日 2024-12-18 最終更新日 2025-01-22 実験手法 ELECTRON MICROSCOPY (2.3 Å) 主引用文献 Donor Strand Complementation and Calcium Ion Coordination Drive the Chaperone-free Polymerization of Archaeal Cannulae. Biorxiv, 2024
8GMB	Crystal structure of the full-length Bruton's tyrosine kinase (PH-TH domain not visible) 分子名称: 2-[3'-(hydroxymethyl)-1-methyl-5-({5-[(2S)-2-methyl-4-(oxetan-3-yl)piperazin-1-yl]pyridin-2-yl}amino)-6-oxo[1,6-dihydro[3,4'-bipyridine]]-2'-yl]-7,7-dimethyl-3,4,7,8-tetrahydro-2H-cyclopenta[4,5]pyrrolo[1,2-a]pyrazin-1(6H)-one, Tyrosine-protein kinase BTK 著者 Lin, D.Y, Andreotti, A.H. 登録日 2023-03-24 公開日 2023-08-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Conformational heterogeneity of the BTK PHTH domain drives multiple regulatory states. Elife, 12, 2024
8Y0X	Dormant ribosome with SERBP1 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Du, M, Zeng, F. 登録日 2024-01-23 公開日 2024-02-07 最終更新日 2024-08-21 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Implication of Stm1 in the protection of eIF5A, eEF2 and tRNA through dormant ribosomes. Front Mol Biosci, 11, 2024
5O40	SOD1 bound to Ebselen 分子名称: N-phenyl-2-selanylbenzamide, SULFATE ION, Superoxide dismutase [Cu-Zn], ... 著者 Capper, M.J, Wright, G.S.A, Antonyuk, S.V, Hasnain, S.S. 登録日 2017-05-25 公開日 2018-06-13 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 The cysteine-reactive small molecule ebselen facilitates effective SOD1 maturation. Nat Commun, 9, 2018
2ZGV	Crystal Structure of human phosphoglycerate kinase bound to D-ADP 分子名称: ADENOSINE-5'-DIPHOSPHATE, Phosphoglycerate kinase 1 著者 Arold, S.T, Gondeau, C, Lionne, C, Chaloin, L. 登録日 2008-01-26 公開日 2008-07-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Molecular basis for the lack of enantioselectivity of human 3-phosphoglycerate kinase Nucleic Acids Res., 36, 2008
5FFO	Integrin alpha V beta 6 in complex with pro-TGF-beta 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Dong, X, Zhao, B, Springer, T.A. 登録日 2015-12-18 公開日 2017-01-25 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (3.49 Å) 主引用文献 Force interacts with macromolecular structure in activation of TGF-beta. Nature, 542, 2017
8UIK	In situ HHT and CHX treated human 80S ribosome with EBP1 (consensus map) 分子名称: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 18S rRNA, 28S rRNA, ... 著者 Wei, Z, Yong, X. 登録日 2023-10-10 公開日 2025-04-30 実験手法 ELECTRON MICROSCOPY (2.96 Å) 主引用文献 In situ HHT and CHX treated human 80S ribosome with EBP1 (consensus map) To Be Published
8UJB	In situ human 80S ribosome with EBP1 (consensus map) 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Wei, Z, Yong, X. 登録日 2023-10-11 公開日 2025-04-30 実験手法 ELECTRON MICROSCOPY (2.67 Å) 主引用文献 In situ human 80S ribosome with EBP1 (Consensus map) To Be Published
8UJJ	In situ HHT and CHX treated A-P state 80S ribosome 分子名称: (3beta)-O~3~-[(2R)-2,6-dihydroxy-2-(2-methoxy-2-oxoethyl)-6-methylheptanoyl]cephalotaxine, 18S rRNA, 28S rRNA, ... 著者 Wei, Z, Yong, X. 登録日 2023-10-11 公開日 2025-04-16 実験手法 ELECTRON MICROSCOPY (3.56 Å) 主引用文献 In situ HHT and CHX treated human A-P state 80S ribosome To Be Published

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