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2ZPX
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TNF Receptor Subtype One-selective TNF Mutant with Antagonistic Activity; R1antTNF-T8
分子名称: Tumor necrosis factor
著者Mukai, Y, Nakamura, T, Yamagata, Y, Tsutsumi, Y.
登録日2008-07-29
公開日2009-03-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Fast binding kinetics and conserved 3D structure underlie the antagonistic activity of mutant TNF: useful information for designing artificial proteo-antagonists
J.Biochem., 146, 2009
2ZJC
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BU of 2zjc by Molmil
TNFR1 selectve TNF mutant; R1-6
分子名称: GLYCEROL, Tumor necrosis factor
著者Mukai, Y, Yamagata, Y, Tsutsumi, Y.
登録日2008-03-05
公開日2009-01-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure-Function Relationship of Tumor Necrosis Factor (TNF) and Its Receptor Interaction Based on 3D Structural Analysis of a Fully Active TNFR1-Selective TNF Mutant
J.Mol.Biol., 385, 2009
1D2Q
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BU of 1d2q by Molmil
CRYSTAL STRUCTURE OF HUMAN TRAIL
分子名称: TNF-RELATED APOPTOSIS INDUCING LIGAND
著者Cha, S.-S.
登録日1999-09-27
公開日2000-02-11
最終更新日2018-01-31
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献2.8 A resolution crystal structure of human TRAIL, a cytokine with selective antitumor activity.
Immunity, 11, 1999
3B9I
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BU of 3b9i by Molmil
Crystal Structure of mouse GITRL at 2.5 A.
分子名称: GITR ligand
著者Chattopadhyay, K, Ramagopal, U.A, Nathenson, S.G, Almo, S.C.
登録日2007-11-05
公開日2008-01-01
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献Evolution of GITRL immune function: murine GITRL exhibits unique structural and biochemical properties within the TNF superfamily.
Proc.Natl.Acad.Sci.Usa, 105, 2008
6X81
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Crystal Structure of TNFalpha with isoquinoline compound 2
分子名称: Tumor necrosis factor, [4-(isoquinolin-8-yl)phenyl]acetonitrile
著者Longenecker, K.L, Stoll, V.S.
登録日2020-06-01
公開日2021-01-13
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Development of Orally Efficacious Allosteric Inhibitors of TNF alpha via Fragment-Based Drug Design.
J.Med.Chem., 64, 2021
6X85
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Crystal Structure of TNFalpha with indolinone compound 9
分子名称: 1-{[2-(difluoromethoxy)phenyl]methyl}-2,2-dimethyl-1,2-dihydro-3H-indol-3-one, Tumor necrosis factor
著者Longenecker, K.L, Stoll, V.S.
登録日2020-06-01
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Development of Orally Efficacious Allosteric Inhibitors of TNF alpha via Fragment-Based Drug Design.
J.Med.Chem., 64, 2021
4HT1
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Human TWEAK in complex with the Fab fragment of a neutralizing antibody
分子名称: Tumor necrosis factor ligand superfamily member 12, chimeric antibody Fab
著者Lammens, A.
登録日2012-10-31
公開日2013-06-12
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2.498 Å)
主引用文献Crystal Structure of Human TWEAK in Complex with the Fab Fragment of a Neutralizing Antibody Reveals Insights into Receptor Binding.
Plos One, 8, 2013
6X82
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Crystal Structure of TNFalpha with isoquinoline compound 4
分子名称: 8-[4-(2-{5-[(4-methylpiperazin-1-yl)methyl]-2-(1H-pyrrolo[3,2-c]pyridin-3-yl)phenoxy}ethyl)phenyl]isoquinoline, Tumor necrosis factor
著者Longenecker, K.L, Stoll, V.S.
登録日2020-06-01
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Development of Orally Efficacious Allosteric Inhibitors of TNF alpha via Fragment-Based Drug Design.
J.Med.Chem., 64, 2021
6X86
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Crystal Structure of TNFalpha with indolinone compound 11
分子名称: 3-[(6-{2-[(3R)-4-(hydroxyacetyl)-3-methylpiperazin-1-yl]pyrimidin-5-yl}-2,2-dimethyl-3-oxo-2,3-dihydro-1H-indol-1-yl)methyl]pyridine-2-carbonitrile, Tumor necrosis factor
著者Longenecker, K.L, Stoll, V.S.
登録日2020-06-01
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Development of Orally Efficacious Allosteric Inhibitors of TNF alpha via Fragment-Based Drug Design.
J.Med.Chem., 64, 2021
6D3N
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Crystal structure of h4-1BB ligand
分子名称: GLYCEROL, Tumor necrosis factor ligand superfamily member 9
著者Aruna, B, Zajonc, D.M, Doukov, T.
登録日2018-04-16
公開日2018-05-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structures of the human 4-1BB receptor bound to its ligand 4-1BBL reveal covalent receptor dimerization as a potential signaling amplifier.
J. Biol. Chem., 293, 2018
6X83
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Crystal Structure of TNFalpha with fragment compound 6
分子名称: 1-benzyl-1H-benzimidazole, Tumor necrosis factor
著者Longenecker, K.L, Stoll, V.S.
登録日2020-06-01
公開日2021-01-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Development of Orally Efficacious Allosteric Inhibitors of TNF alpha via Fragment-Based Drug Design.
J.Med.Chem., 64, 2021
4KG8
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Crystal structure of light mutant
分子名称: Tumor necrosis factor ligand superfamily member 14
著者Liu, W, Zhan, C, Kumar, P.R, Bonanno, J.B, Nathenson, S.G, Almo, S.C, New York Structural Genomics Research Consortium (NYSGRC), Atoms-to-Animals: The Immune Function Network (IFN)
登録日2013-04-28
公開日2013-08-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Mechanistic basis for functional promiscuity in the TNF and TNF receptor superfamilies: structure of the LIGHT:DcR3 assembly.
Structure, 22, 2014
2RJK
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BU of 2rjk by Molmil
Crystal Structure of Human TL1A Extracellular Domain C95S Mutant
分子名称: TNF superfamily ligand TL1A
著者Zhan, C, Yan, Q, Patskovsky, Y, Shi, W, Ramagopal, U.A, Toro, R, Bonanno, J, Nathenson, S.G, Almo, S.C.
登録日2007-10-15
公開日2008-08-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Biochemical and structural characterization of the human TL1A ectodomain.
Biochemistry, 48, 2009
1IQA
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BU of 1iqa by Molmil
CRYSTAL STRUCTURE OF THE EXTRACELLULAR DOMAIN OF MOUSE RANK LIGAND
分子名称: RECEPTOR ACTIVATOR OF NUCLEAR FACTOR KAPPA B LIGAND
著者Ito, S, Wakabayashi, K, Ubukata, O, Hayashi, S, Okada, F, Hata, T.
登録日2001-07-11
公開日2002-03-13
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of the extracellular domain of mouse RANK ligand at 2.2-A resolution.
J.Biol.Chem., 277, 2002
2TNF
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BU of 2tnf by Molmil
1.4 A RESOLUTION STRUCTURE OF MOUSE TUMOR NECROSIS FACTOR, TOWARDS MODULATION OF ITS SELECTIVITY AND TRIMERISATION
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ISOPROPYL ALCOHOL, PROTEIN (TUMOR NECROSIS FACTOR ALPHA)
著者Baeyens, K.J, De Bondt, H.L, Raeymaekers, A, Fiers, W, De Ranter, C.J.
登録日1998-10-12
公開日1999-10-12
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The structure of mouse tumour-necrosis factor at 1.4 A resolution: towards modulation of its selectivity and trimerization.
Acta Crystallogr.,Sect.D, 55, 1999
2RE9
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Crystal structure of TL1A at 2.1 A
分子名称: GLYCEROL, MAGNESIUM ION, TNF superfamily ligand TL1A
著者Jin, T.C, Guo, F, Kim, S, Howard, A.J, Zhang, Y.Z.
登録日2007-09-25
公開日2007-10-09
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray crystal structure of TNF ligand family member TL1A at 2.1 A.
Biochem.Biophys.Res.Commun., 364, 2007
2RJL
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Crystal structure of human TL1A extracellular domain C95S/C135S mutant
分子名称: TNF superfamily ligand TL1A
著者Zhan, C, Patskovsky, Y, Yan, Q, Shi, W, Toro, R, Bonanno, J, Nathenson, S.G, Almo, S.C.
登録日2007-10-15
公開日2008-08-26
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Biochemical and structural characterization of the human TL1A ectodomain.
Biochemistry, 48, 2009
2TUN
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BU of 2tun by Molmil
CONFORMATIONAL CHANGES IN THE (ALA-84-VAL) MUTANT OF TUMOR NECROSIS FACTOR
分子名称: TUMOR NECROSIS FACTOR-ALPHA
著者Saludjian, P, Prange, T.
登録日1993-10-06
公開日1994-01-31
最終更新日2013-06-19
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Conformational Changes in the (Ala-84-Val) Mutant of Tumor Necrosis Factor
To be Published
1I9R
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BU of 1i9r by Molmil
STRUCTURE OF CD40L IN COMPLEX WITH THE FAB FRAGMENT OF HUMANIZED 5C8 ANTIBODY
分子名称: CD40 LIGAND, IMMUNOGLOBULIN H, IMMUNOGLOBULIN L, ...
著者Karpusas, M, Lucci, J, Ferrant, J, Benjamin, C, Hsu, Y.-M.
登録日2001-03-20
公開日2002-03-20
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structure of CD40 ligand in complex with the Fab fragment of a neutralizing humanized antibody.
Structure, 9, 2001
1JH5
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BU of 1jh5 by Molmil
Crystal Structure of sTALL-1 of TNF family ligand
分子名称: TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 13B
著者Liu, Y, Xu, L, Opalka, N, Shu, H.-B, Zhang, G.
登録日2001-06-27
公開日2002-02-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of sTALL-1 reveals a virus-like assembly of TNF family ligands.
Cell(Cambridge,Mass.), 108, 2002
1KXG
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BU of 1kxg by Molmil
The 2.0 Ang Resolution Structure of BLyS, B Lymphocyte Stimulator.
分子名称: 1,4-DIETHYLENE DIOXIDE, B lymphocyte stimulator, CITRIC ACID, ...
著者Oren, D.A, Li, Y, Volovik, Y, Morris, T.S, Dharia, C, Das, K, Galperina, O, Gentz, R, Arnold, E.
登録日2002-01-31
公開日2002-03-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of BLyS receptor recognition.
Nat.Struct.Biol., 9, 2002
2X29
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Crystal structure of human4-1BB ligand ectodomain
分子名称: TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 9
著者Won, E.Y, Cho, H.S.
登録日2010-01-12
公開日2010-03-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The Structure of the Trimer of Human 4-1Bb Ligand is Unique Among Members of the Tumor Necrosis Factor Superfamily.
J.Biol.Chem., 285, 2010
1KD7
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Crystal structure of an extracellular domain fragment of human BAFF
分子名称: TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 13B
著者Karpusas, M, Cachero, T.G, Qian, F, Boriack-Sjodin, A, Mullen, C, Strauch, K, Hsu, Y.-M, Kalled, S.L.
登録日2001-11-12
公開日2002-11-12
最終更新日2017-02-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structure of Extracellular Human BAFF, a TNF Family Member that Stimulates B Lymphocytes
J.Mol.Biol., 315, 2002
1JTZ
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CRYSTAL STRUCTURE OF TRANCE/RANKL CYTOKINE.
分子名称: TUMOR NECROSIS FACTOR LIGAND SUPERFAMILY MEMBER 11
著者Nelson, C.A, Fremont, D.H.
登録日2001-08-23
公開日2001-09-12
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structure of the TRANCE/RANKL cytokine reveals determinants of receptor-ligand specificity
J.Clin.Invest., 108, 2001
1S55
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Mouse RANKL Structure at 1.9A Resolution
分子名称: CHLORIDE ION, Tumor necrosis factor ligand superfamily member 11
著者Teale, M.J, Feug, X, Chen, L, Bice, T, Meehan, E.J.
登録日2004-01-19
公開日2005-07-05
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Murine RANKL Extra Cellular Domain Homotrimer Structure In Space Groups P212121 And H3 At 1.9 And 2.6 Respectively
To be Published

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