PDB: 17012 件ウェブページステータス検索Chemie searchBIRD

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4HP3	Crystal structure of Tet3 in complex with a CpG dsDNA 分子名称: DNA (5'-D(*GP*CP*CP*AP*AP*CP*GP*TP*TP*GP*GP*C)-3'), LOC100036628 protein, UNKNOWN ATOM OR ION, ... 著者 Chao, X, Tempel, W, Bian, C, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC) 登録日 2012-10-23 公開日 2012-12-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Tet3 CXXC Domain and Dioxygenase Activity Cooperatively Regulate Key Genes for Xenopus Eye and Neural Development. Cell(Cambridge,Mass.), 151, 2012
5L9U	Model of human Anaphase-promoting complex/Cyclosome (APC/C-CDH1) with a cross linked Ubiquitin variant-substrate-UBE2C (UBCH10) complex representing key features of multiubiquitination 分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ... 著者 Brown, N.G, VanderLinden, R, Dube, P, Haselbach, D, Peters, J.M, Stark, H, Schulman, B.A. 登録日 2016-06-11 公開日 2016-09-14 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (6.4 Å) 主引用文献 Dual RING E3 Architectures Regulate Multiubiquitination and Ubiquitin Chain Elongation by APC/C. Cell, 165, 2016
2Z13	Crystal structure of the N-terminal DUF1126 in human EF-hand domain 分子名称: EF-hand domain-containing family member C2 著者 Saito, K, Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-05-07 公開日 2007-11-13 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Crystal structure of the N-terminal DUF1126 in human EF-hand domain To be Published
4LUT	alanine racemase [Clostridium difficile 630] complex with cycloserine 分子名称: Alanine racemase, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE 著者 Asojo, O.A. 登録日 2013-07-25 公開日 2014-06-04 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Structural and biochemical analyses of alanine racemase from the multidrug-resistant Clostridium difficile strain 630. Acta Crystallogr.,Sect.D, 70, 2014
4LQ3	Crystal structure of human norovirus RNA-dependent RNA-polymerase bound to the inhibitor PPNDS 分子名称: 3-[(E)-{4-formyl-5-hydroxy-6-methyl-3-[(phosphonooxy)methyl]pyridin-2-yl}diazenyl]-7-nitronaphthalene-1,5-disulfonic acid, 5'-R(P*GP*G)-3', MAGNESIUM ION, ... 著者 Milani, M, Tarantino, D, Mastrangelo, E, Croci, R. 登録日 2013-07-17 公開日 2014-02-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Naphthalene-sulfonate inhibitors of human norovirus RNA-dependent RNA-polymerase. Antiviral Res., 102, 2014
4LUY	Crystal structure of CdALR mutant K 271 T 分子名称: Alanine racemase 著者 Asojo, O.A. 登録日 2013-07-25 公開日 2014-06-04 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structural and biochemical analyses of alanine racemase from the multidrug-resistant Clostridium difficile strain 630. Acta Crystallogr.,Sect.D, 70, 2014
4HLT	Crystal structure of ferric E32V Pirin 分子名称: FE (II) ION, Pirin 著者 Liu, F, Rehmani, I, Esaki, S, Fu, R, Chen, L, Serrano, V, Liu, A. 登録日 2012-10-17 公開日 2013-05-29 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Pirin is an iron-dependent redox regulator of NF-kappa B. Proc.Natl.Acad.Sci.USA, 110, 2013
4HNO	High resolution crystal structure of DNA Apurinic/apyrimidinic (AP) endonuclease IV Nfo from Thermatoga maritima 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, ... 著者 Shin, D.S, Hosfield, D.J, Arvai, A.S, Tsutakawa, S.E, Tainer, J.A. 登録日 2012-10-20 公開日 2013-01-23 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (0.9194 Å) 主引用文献 Conserved Structural Chemistry for Incision Activity in Structurally Non-homologous Apurinic/Apyrimidinic Endonuclease APE1 and Endonuclease IV DNA Repair Enzymes. J.Biol.Chem., 288, 2013
4M00	Crystal structure of the ligand binding region of staphylococcal adhesion SraP 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, Serine-rich adhesin for platelets, ... 著者 Yang, Y.H, Jiang, Y.L, Zhang, J, Wang, L, Chen, Y, Zhou, C.Z. 登録日 2013-08-01 公開日 2014-06-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural Insights into SraP-Mediated Staphylococcus aureus Adhesion to Host Cells Plos Pathog., 10, 2014
2YRQ	Solution structure of the tandem HMG box domain from Human High mobility group protein B1 分子名称: High mobility group protein B1 著者 Tomizawa, T, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-02 公開日 2008-02-12 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution structure of the tandem HMG box domain from Human High mobility group protein B1 To be Published
5LCW	Cryo-EM structure of the Anaphase-promoting complex/Cyclosome, in complex with the Mitotic checkpoint complex (APC/C-MCC) at 4.2 angstrom resolution 分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ... 著者 Alfieri, C, Chang, L, Zhang, Z, Yang, J, Maslen, S, Skehel, M, Barford, D. 登録日 2016-06-22 公開日 2016-08-10 最終更新日 2019-10-23 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Molecular basis of APC/C regulation by the spindle assembly checkpoint. Nature, 536, 2016
2YY2	Crystal structure of the human Phosphodiesterase 9A catalytic domain complexed with IBMX 分子名称: 3-ISOBUTYL-1-METHYLXANTHINE, High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, MAGNESIUM ION, ... 著者 Handa, N, Shirouzu, M, Terada, T, Omori, K, Kotera, J, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-04-27 公開日 2007-10-30 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystal structure of the human Phosphodiesterase 9A catalytic domain To be Published
3E5C	Crystal Structure of the SMK box (SAM-III) Riboswitch with SAM 分子名称: S-ADENOSYLMETHIONINE, SMK box (SAM-III) Riboswitch, STRONTIUM ION 著者 Lu, C. 登録日 2008-08-13 公開日 2008-10-07 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Crystal structures of the SAM-III/S(MK) riboswitch reveal the SAM-dependent translation inhibition mechanism. Nat.Struct.Mol.Biol., 15, 2008
7NA8	Structures of human ghrelin receptor-Gi complexes with ghrelin and a synthetic agonist 分子名称: 1-(methanesulfonyl)-1'-(2-methyl-L-alanyl-O-benzyl-D-seryl)-1,2-dihydrospiro[indole-3,4'-piperidine], Antibody fragment, CHOLESTEROL, ... 著者 Liu, H, Sun, D, Sun, J, Zhang, C. 登録日 2021-06-20 公開日 2021-12-15 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structural basis of human ghrelin receptor signaling by ghrelin and the synthetic agonist ibutamoren Nat Commun, 12, 2021
7NA7	Structures of human ghrelin receptor-Gi complexes with ghrelin and a synthetic agonist 分子名称: Antibody fragment, CHOLESTEROL, Ghrelin-27, ... 著者 Liu, H, Sun, D, Sun, J, Zhang, C. 登録日 2021-06-20 公開日 2021-12-15 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structural basis of human ghrelin receptor signaling by ghrelin and the synthetic agonist ibutamoren Nat Commun, 12, 2021
8JCC	Human histone H2B variant H2BFWT Cryo-EM structure with 601 DNA sequence 分子名称: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type W-T, ... 著者 Ding, D.B, Ishibashi, T. 登録日 2023-05-10 公開日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.42 Å) 主引用文献 Human histone H2B variant H2BFWT Cryo-EM structure with 601 DNA sequence To Be Published
4HP1	Crystal structure of Tet3 in complex with a non-CpG dsDNA 分子名称: DNA (5'-D(*GP*CP*CP*AP*CP*(5CM)P*GP*GP*TP*GP*GP*C)-3'), LOC100036628 protein, ZINC ION 著者 Chao, X, Tempel, W, Bian, C, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC) 登録日 2012-10-23 公開日 2012-12-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Tet3 CXXC Domain and Dioxygenase Activity Cooperatively Regulate Key Genes for Xenopus Eye and Neural Development. Cell(Cambridge,Mass.), 151, 2012
4MKH	Crystal structure of a stable adenylate kinase variant AKv18 分子名称: 1,2-ETHANEDIOL, Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ... 著者 Moon, S, Bae, E. 登録日 2013-09-05 公開日 2014-03-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 An integrated approach for thermal stabilization of a mesophilic adenylate kinase. Proteins, 82, 2014
4MLE	Human Glucokinase in Complex with Novel Amino Thiazole Activator 分子名称: 3-(benzyloxy)-N-(4-methyl-1,3-thiazol-2-yl)pyridin-2-amine, Glucokinase, alpha-D-glucopyranose 著者 Voegtli, W.C. 登録日 2013-09-06 公開日 2013-09-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Identification of a New Class of Glucokinase Activators through Structure-Based Design. J.Med.Chem., 56, 2013
4MLH	Human Glucokinase in Complex with a Novel Amino Thiazole Allosteric Activator 分子名称: 3-(benzyloxy)-5-methyl-N-(4-methyl-1,3-thiazol-2-yl)pyridin-2-amine, Glucokinase, alpha-D-glucopyranose 著者 Voegtli, W.C. 登録日 2013-09-06 公開日 2013-09-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Identification of a New Class of Glucokinase Activators through Structure-Based Design. J.Med.Chem., 56, 2013
4MKF	Crystal structure of a stable adenylate kinase variant AKv3 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CALCIUM ION, ... 著者 Moon, S, Jung, D, Bae, E. 登録日 2013-09-05 公開日 2014-03-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 An integrated approach for thermal stabilization of a mesophilic adenylate kinase. Proteins, 82, 2014
4HV7	Structure of ricin A chain bound with N-(N-(pterin-7-yl)carbonylglycyl)glycine 分子名称: 2-[2-[(2-azanyl-4-oxidanylidene-1H-pteridin-7-yl)carbonylamino]ethanoylamino]ethanoic acid, MALONIC ACID, Ricin, ... 著者 Jasheway, K.R, Monzingo, A.F, Saito, R, Pruet, J.M, Manzano, L.A, Wiget, P.A, Anslyn, E.V, Robertus, J.D. 登録日 2012-11-05 公開日 2012-12-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.869 Å) 主引用文献 Peptide-conjugated pterins as inhibitors of ricin toxin A. J.Med.Chem., 56, 2013
4MKG	Crystal structure of a stable adenylate kinase variant AKv8 分子名称: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ... 著者 Moon, S, Jung, D, Bae, E. 登録日 2013-09-05 公開日 2014-03-26 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 An integrated approach for thermal stabilization of a mesophilic adenylate kinase. Proteins, 82, 2014
4I01	Structure of the mutant Catabolite gen activator protein V140L 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, Catabolite gene activator 著者 Pohl, E, Townsend, P.D, Rodgers, T, Burnell, D, McLeish, T.C.B, Wilson, M.R, Cann, M.J. 登録日 2012-11-16 公開日 2013-10-30 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Modulation of global low-frequency motions underlies allosteric regulation: demonstration in CRP/FNR family transcription factors. Plos Biol., 11, 2013
2Z14	Crystal structure of the N-terminal DUF1126 in human ef-hand domain containing 2 protein 分子名称: EF-hand domain-containing family member C2 著者 Saito, K, Olsen, S, Kishishita, S, Nishino, A, Murayama, K, Terada, T, Shirouzu, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-05-08 公開日 2007-11-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Crystal structure of the N-terminal DUF1126 in human ef-hand domain containing 2 protein To be Published

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