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3H4C
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BU of 3h4c by Molmil
Structure of the C-terminal Domain of Transcription Factor IIB from Trypanosoma brucei
分子名称: 1,2-ETHANEDIOL, Transcription factor TFIIB-like
著者Syed Ibrahim, B, Kanneganti, N, Rieckhof, G.E, Das, A, Laurents, D.V, Palenchar, J.B, Bellofatto, V, Wah, D.A.
登録日2009-04-18
公開日2009-08-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the C-terminal domain of transcription factor IIB from Trypanosoma brucei.
Proc.Natl.Acad.Sci.USA, 106, 2009
8CG9
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BU of 8cg9 by Molmil
Crystal structure of human DNA cross-link repair 1A in complex with a cyclic N-hydroxyurea inhibitor
分子名称: 1-[(2S)-2,3-dihydro-1,4-benzodioxin-2-ylmethyl]-3-hydroxythieno[3,2-d]pyrimidine-2,4(1H,3H)-dione, 1-[[(3~{R})-2,3-dihydro-1,4-benzodioxin-3-yl]methyl]-3-oxidanyl-thieno[3,2-d]pyrimidine-2,4-dione, DNA cross-link repair 1A protein, ...
著者Newman, J.A, Yosaatmadja, Y, Baddock, H.T, Bielinski, M, von Delft, F, Bountra, C, McHugh, P.J, Schofield, C.J, Gileadi, O.
登録日2023-02-03
公開日2024-02-21
最終更新日2024-09-11
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Cell-active small molecule inhibitors validate the SNM1A DNA repair nuclease as a cancer target.
Chem Sci, 15, 2024
4EPZ
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BU of 4epz by Molmil
Crystal structure of a transcription anti-terminator antagonist UpxZ (BACUNI_04315) from Bacteroides uniformis ATCC 8492 at 1.68 A resolution
分子名称: CALCIUM ION, transcription anti-terminator antagonist UpxZ
著者Joint Center for Structural Genomics (JCSG)
登録日2012-04-17
公開日2012-07-11
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Crystal structure of a transcription anti-terminator antagonist UpxZ (BACUNI_04315) from Bacteroides uniformis ATCC 8492 at 1.68 A resolution
To be published
4NEO
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BU of 4neo by Molmil
Structure of BlmI, a type-II acyl-carrier-protein from Streptomyces verticillus involved in bleomycin biosynthesis
分子名称: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, Peptide synthetase NRPS type II-PCP
著者Cuff, M.E, Bigelow, L, Bearden, J, Babnigg, G, Bruno, C.J.P, Bingman, C.A, Yennamalli, R, Lohman, J, Ma, M, Shen, B, Phillips Jr, G.N, Joachimiak, A, Enzyme Discovery for Natural Product Biosynthesis (NatPro), Midwest Center for Structural Genomics (MCSG)
登録日2013-10-29
公開日2014-01-29
最終更新日2023-03-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The crystal structure of BlmI as a model for nonribosomal peptide synthetase peptidyl carrier proteins.
Proteins, 82, 2014
5BN3
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BU of 5bn3 by Molmil
Structure of a unique ATP synthase NeqA-NeqB in complex with ADP from Nanoarcheaum equitans
分子名称: 1,4-DIETHYLENE DIOXIDE, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
著者Mohanty, S, Jobichen, C, Chichili, V.P.R, Sivaraman, J.
登録日2015-05-25
公開日2015-09-16
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for a Unique ATP Synthase Core Complex from Nanoarcheaum equitans
J.Biol.Chem., 290, 2015
7WAR
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BU of 7war by Molmil
SbSOMT in complex with pinostilbene and nicotinamide adenine dinucleotide(NAD+)
分子名称: 1,2-ETHANEDIOL, 3-[(E)-2-(4-hydroxyphenyl)ethenyl]-5-methoxy-phenol, ACETATE ION, ...
著者Pow, K.C, Hao, Q.
登録日2021-12-14
公開日2022-12-21
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Regioselective stilbene O-methylations in Saccharinae grasses.
Nat Commun, 14, 2023
6FO5
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BU of 6fo5 by Molmil
FIRST DOMAIN OF HUMAN BROMODOMAIN BRD4 IN COMPLEX WITH INHIBITOR #17
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ~{N}-[[4-[[7-ethyl-2,6-bis(oxidanylidene)purin-3-yl]methyl]phenyl]methyl]-2-oxidanylidene-1,3,4,5-tetrahydro-1-benzazepine-7-sulfonamide
著者Raux, B, Betzi, S.
登録日2018-02-06
公開日2018-06-20
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Integrated Strategy for Lead Optimization Based on Fragment Growing: The Diversity-Oriented-Target-Focused-Synthesis Approach.
J. Med. Chem., 61, 2018
8QWL
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BU of 8qwl by Molmil
Structure of p53 cancer mutant Y163C
分子名称: 1,2-ETHANEDIOL, Cellular tumor antigen p53, MALONATE ION, ...
著者Balourdas, D.I, Markl, A.M, Kraemer, A, Knapp, S, Joerger, A.C, Structural Genomics Consortium (SGC)
登録日2023-10-19
公開日2024-06-19
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural basis of p53 inactivation by cavity-creating cancer mutations and its implications for the development of mutant p53 reactivators.
Cell Death Dis, 15, 2024
6DRR
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BU of 6drr by Molmil
Crystal structure of Cj0485 dehydrogenase
分子名称: 1,2-ETHANEDIOL, Short-chain dehydrogenase
著者Pluvinage, B, Boraston, A.B.
登録日2018-06-12
公開日2019-07-10
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.599 Å)
主引用文献The gastrointestinal pathogen Campylobacter jejuni metabolizes sugars with potential help from commensal Bacteroides vulgatus.
Commun Biol, 3, 2020
5J1U
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BU of 5j1u by Molmil
Structure of Transcriptional Regulatory Repressor Protein - EthR from Mycobacterium Tuberculosis in complex with N-(furan-3-ylmethyl)pyrrolidine-1-carboxamide at 1.80A resolution
分子名称: EthR, N-[(furan-3-yl)methyl]pyrrolidine-1-carboxamide
著者Blaszczyk, M, Surade, S, Nikiforov, P.O, Abell, C, Blundell, T.L.
登録日2016-03-29
公開日2017-04-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fragment-Sized EthR Inhibitors Exhibit Exceptionally Strong Ethionamide Boosting Effect in Whole-Cell Mycobacterium tuberculosis Assays.
ACS Chem. Biol., 12, 2017
8VOJ
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BU of 8voj by Molmil
The Cryo-EM structure of LSD1-CoREST-HDAC1 in complex with KBTBD4 enhanced by UM171 and IP6
分子名称: (1r,4r)-N~1~-[(7P)-2-benzyl-7-(2-methyl-2H-tetrazol-5-yl)-9H-pyrimido[4,5-b]indol-4-yl]cyclohexane-1,4-diamine, Histone deacetylase 1, INOSITOL HEXAKISPHOSPHATE, ...
著者Xie, X, Mao, H, Liau, B, Zheng, N.
登録日2024-01-15
公開日2024-12-04
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献UM171 glues asymmetric CRL3-HDAC1/2 assembly to degrade CoREST corepressors.
Nature, 639, 2025
6JNT
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BU of 6jnt by Molmil
Catalase structure determined by eEFD (dataset 1)
分子名称: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
著者Yonekura, K, Maki-Yonekura, S.
登録日2019-03-18
公開日2019-04-24
最終更新日2024-03-27
実験手法ELECTRON CRYSTALLOGRAPHY (3 Å)
主引用文献A new cryo-EM system for electron 3D crystallography by eEFD.
J.Struct.Biol., 206, 2019
7WIK
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BU of 7wik by Molmil
Crystal structure of oligoribonuclease of Mycobacterium smegmatis mc2 155
分子名称: ACETATE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Badhwar, P, Taneja, B.
登録日2022-01-03
公開日2022-12-21
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Three-dimensional structure of a mycobacterial oligoribonuclease reveals a unique C-terminal tail that stabilizes the homodimer.
J.Biol.Chem., 298, 2022
6G54
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BU of 6g54 by Molmil
Crystal structure of ERK2 covalently bound to SM1-71
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Mitogen-activated protein kinase 1, ...
著者Chaikuad, A, Suman, R, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Gray, N.S, Knapp, S, Structural Genomics Consortium (SGC)
登録日2018-03-29
公開日2019-02-27
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Leveraging Compound Promiscuity to Identify Targetable Cysteines within the Kinome.
Cell Chem Biol, 26, 2019
7TH2
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BU of 7th2 by Molmil
Single-domain VHH intrabodies neutralize ricin toxin
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
著者Rudolph, M.J, Mantis, N.
登録日2022-01-10
公開日2022-10-12
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.838 Å)
主引用文献Single-domain antibodies neutralize ricin toxin intracellularly by blocking access to ribosomal P-stalk proteins.
J.Biol.Chem., 298, 2022
7WCP
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BU of 7wcp by Molmil
CryoEM structure of the SARS-CoV-2 S6P(B.1.617.2) in complex with SWC11 Fab
分子名称: SWC11H, SWC11L, Surface glycoprotein
著者Du, S, Xiao, J.Y.
登録日2021-12-20
公開日2022-12-28
最終更新日2025-06-25
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献CryoEM structure of the SARS-CoV-2 S6P(B.1.617.2) in complex with SWC11 Fab
To Be Published
6JQ7
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BU of 6jq7 by Molmil
The ligand-free structure of human PPARgamma LBD in the presence of the SRC-1 coactivator peptide
分子名称: 16-mer peptide from Nuclear receptor coactivator 1, Peroxisome proliferator-activated receptor gamma
著者Jang, J.Y, Han, B.W.
登録日2019-03-29
公開日2019-10-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis for the inhibitory effects of a novel reversible covalent ligand on PPAR gamma phosphorylation.
Sci Rep, 9, 2019
6SQZ
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BU of 6sqz by Molmil
Mouse dCTPase in complex with dCMPNPP
分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, MAGNESIUM ION, dCTP pyrophosphatase 1
著者Scaletti, E.R, Claesson, M, Helleday, H, Jemth, A.S, Stenmark, P.
登録日2019-09-04
公開日2020-01-29
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The First Structure of an Active Mammalian dCTPase and its Complexes With Substrate Analogs and Products.
J.Mol.Biol., 432, 2020
4YU9
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BU of 4yu9 by Molmil
Crystal Structure of double mutant Y115E Y117E human Glutaminyl Cyclase
分子名称: 1,2-ETHANEDIOL, Glutaminyl-peptide cyclotransferase, SULFATE ION, ...
著者Di Pisa, F, Pozzi, C, Benvenuti, M, Mangani, S.
登録日2015-03-18
公開日2015-08-05
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The soluble Y115E-Y117E variant of human glutaminyl cyclase is a valid target for X-ray and NMR screening of inhibitors against Alzheimer disease.
Acta Crystallogr.,Sect.F, 71, 2015
5J7C
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BU of 5j7c by Molmil
A picomolar affinity FN3 domain in complex with hen egg-white lysozyme
分子名称: FNfn10-anti-lysozyme (DE0.4.1), Lysozyme C
著者Porebski, B.T, Drinkwater, N, McGowan, S, Buckle, A.M.
登録日2016-04-06
公開日2016-08-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.535 Å)
主引用文献Circumventing the stability-function trade-off in an engineered FN3 domain.
Protein Eng.Des.Sel., 2016
7ZQT
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BU of 7zqt by Molmil
Helicobacter pylori adhesin BabA bound to neutralising human antibody.
分子名称: 1,2-ETHANEDIOL, Adhesin binding fucosylated histo-blood group antigen, GLYCEROL, ...
著者Moonens, K, Boren, T.
登録日2022-05-03
公開日2023-05-17
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Helicobacter pylori adhesin BabA bound to neutralising human antibody.
To Be Published
6D8V
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BU of 6d8v by Molmil
Methyl-accepting Chemotaxis protein X
分子名称: 1,1-DIMETHYL-PROLINIUM, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Probable chemoreceptor (Methyl-accepting chemotaxis) transmembrane protein
著者Shrestha, M, Schubot, F.D.
登録日2018-04-27
公開日2019-04-17
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of the sensory domain of McpX fromSinorhizobium meliloti, the first known bacterial chemotactic sensor for quaternary ammonium compounds.
Biochem. J., 475, 2018
5J7Q
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BU of 5j7q by Molmil
Macrophage Migration Inhibitory Factor bound to Inhibitor K664 Derivative
分子名称: 4-(imidazo[1,2-a]pyridin-2-yl)benzene-1,2-diol, GLYCEROL, ISOPROPYL ALCOHOL, ...
著者Robertson, M.J, Jorgensen, W.L.
登録日2016-04-06
公開日2016-05-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Irregularities in enzyme assays: The case of macrophage migration inhibitory factor.
Bioorg.Med.Chem.Lett., 26, 2016
8HNN
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BU of 8hnn by Molmil
Structure of CXCR3 complexed with antagonist SCH546738
分子名称: 3-azanyl-6-chloranyl-5-[(3S)-4-[1-[(4-chlorophenyl)methyl]piperidin-4-yl]-3-ethyl-piperazin-1-yl]pyrazine-2-carboxamide, CHOLESTEROL, Nb6, ...
著者Jiao, H.Z, Hu, H.L.
登録日2022-12-08
公開日2023-11-29
最終更新日2025-07-23
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural insights into the activation and inhibition of CXC chemokine receptor 3.
Nat.Struct.Mol.Biol., 31, 2024
9F2V
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BU of 9f2v by Molmil
Crystal structure of SARS-CoV-2 Mpro in complex with RHTCR02
分子名称: 3C-like proteinase nsp5, ~{tert}-butyl ~{N}-[1-[(2~{S})-1-[[(2~{R},3~{S})-4-azanyl-3-oxidanyl-4-oxidanylidene-1-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]butan-2-yl]amino]-3-cyclopropyl-1-oxidanylidene-propan-2-yl]-5-fluoranyl-2-oxidanylidene-pyridin-3-yl]carbamate
著者El kilani, H, Hilgenfeld, R.
登録日2024-04-24
公開日2025-01-29
最終更新日2025-02-26
実験手法X-RAY DIFFRACTION (2.191 Å)
主引用文献Structure-Based Optimization of Pyridone alpha-Ketoamides as Inhibitors of the SARS-CoV-2 Main Protease.
J.Med.Chem., 68, 2025

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