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8VAT
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BU of 8vat by Molmil
Structure of the E. coli clamp loader bound to the beta clamp in a Open-RNAp/t conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ...
著者Landeck, J.T, Kelch, B.A.
登録日2023-12-11
公開日2024-03-27
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication.
J.Biol.Chem., 300, 2024
8VAM
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BU of 8vam by Molmil
Structure of the E. coli clamp loader bound to the beta clamp in a Semi-Open conformation
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, Beta sliding clamp, ...
著者Landeck, J.T, Kelch, B.A.
登録日2023-12-11
公開日2024-03-27
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Differences between bacteria and eukaryotes in clamp loader mechanism, a conserved process underlying DNA replication.
J.Biol.Chem., 300, 2024
8VRK
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BU of 8vrk by Molmil
Rigid body fitted model for refined density map of gamma tubulin ring complex capped microtubule
分子名称: Actin, cytoplasmic 1, Gamma-tubulin complex component 3, ...
著者Aher, A, Urnavicius, L, Kapoor, T.M.
登録日2024-01-22
公開日2024-03-27
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (8.5 Å)
主引用文献Structure of the gamma-tubulin ring complex-capped microtubule.
Nat.Struct.Mol.Biol., 2024
8VRJ
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BU of 8vrj by Molmil
Rigid body fitted model for gamma tubulin ring complex capped microtubule
分子名称: Actin, cytoplasmic 1, Gamma-tubulin complex component 3, ...
著者Aher, A, Urnavicius, L, Kapoor, T.M.
登録日2024-01-22
公開日2024-03-27
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Structure of the gamma-tubulin ring complex-capped microtubule.
Nat.Struct.Mol.Biol., 2024
8X15
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BU of 8x15 by Molmil
Structure of nucleosome-bound SRCAP-C in the apo state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Actin, ...
著者Yu, J, Wang, Q, Yu, Z, Li, W, Wang, L, Xu, Y.
登録日2023-11-06
公開日2024-03-06
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural insights into histone exchange by human SRCAP complex.
Cell Discov, 10, 2024
1U4H
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BU of 1u4h by Molmil
Crystal structure of an oxygen binding H-NOX domain related to soluble guanylate cyclases (oxygen complex)
分子名称: GLYCEROL, Heme-based Methyl-accepting Chemotaxis Protein, OXYGEN MOLECULE, ...
著者Pellicena, P, Karow, D.S, Boon, E.M, Marletta, M.A, Kuriyan, J.
登録日2004-07-25
公開日2004-08-31
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal structure of an oxygen-binding heme domain related to soluble guanylate cyclases.
Proc.Natl.Acad.Sci.Usa, 101, 2004
5IRC
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BU of 5irc by Molmil
p190A GAP domain complex with RhoA
分子名称: CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Derewenda, U, Derewenda, Z.
登録日2016-03-12
公開日2016-08-17
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献Deciphering the Molecular and Functional Basis of RHOGAP Family Proteins: A SYSTEMATIC APPROACH TOWARD SELECTIVE INACTIVATION OF RHO FAMILY PROTEINS.
J.Biol.Chem., 291, 2016
5WOU
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BU of 5wou by Molmil
Crystal Structure of drosophila melanogaster Scribble PDZ1 domain in complex with Guk-Holder
分子名称: 1,2-ETHANEDIOL, GUK-holder, isoform A, ...
著者Caria, S, Kvansakul, M.
登録日2017-08-03
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Drosophila melanogasterGuk-holder interacts with the Scribbled PDZ1 domain and regulates epithelial development with Scribbled and Discs Large.
J. Biol. Chem., 293, 2018
6E21
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BU of 6e21 by Molmil
Joint X-ray/neutron structure of PKAc with products Sr2-ADP and phosphorylated peptide SP20
分子名称: ADENOSINE-5'-DIPHOSPHATE, STRONTIUM ION, cAMP-dependent protein kinase catalytic subunit alpha, ...
著者Kovalevsky, A, Gerlits, O.O, Taylor, S.
登録日2018-07-10
公開日2019-04-03
最終更新日2023-10-25
実験手法NEUTRON DIFFRACTION (2 Å), X-RAY DIFFRACTION
主引用文献Zooming in on protons: Neutron structure of protein kinase A trapped in a product complex.
Sci Adv, 5, 2019
6EDE
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BU of 6ede by Molmil
tRNA 2'-phosphotransferase
分子名称: Probable RNA 2'-phosphotransferase, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate
著者Shuman, S, Goldgur, Y, Banerjee, A.
登録日2018-08-09
公開日2019-03-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.553 Å)
主引用文献Structure of tRNA splicing enzyme Tpt1 illuminates the mechanism of RNA 2'-PO4recognition and ADP-ribosylation.
Nat Commun, 10, 2019
6E3A
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BU of 6e3a by Molmil
tRNA 2'-phosphotransferase
分子名称: COENZYME A, Probable RNA 2'-phosphotransferase, [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-3,4-bis(oxidanyl)-5-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate
著者Shuman, S, Goldgur, Y, Banerjee, A.
登録日2018-07-13
公開日2019-03-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structure of tRNA splicing enzyme Tpt1 illuminates the mechanism of RNA 2'-PO4recognition and ADP-ribosylation.
Nat Commun, 10, 2019
5JLH
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BU of 5jlh by Molmil
Cryo-EM structure of a human cytoplasmic actomyosin complex at near-atomic resolution
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 2, ...
著者von der Ecken, J, Heissler, S.M, Pathan-Chhatbar, S, Manstein, D.J, Raunser, S.
登録日2016-04-27
公開日2016-06-15
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Cryo-EM structure of a human cytoplasmic actomyosin complex at near-atomic resolution.
Nature, 534, 2016
6EH0
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BU of 6eh0 by Molmil
Apo crystal structure of the Protein-Kinase A catalytic subunit from Criteculus
分子名称: cAMP-dependent protein kinase catalytic subunit alpha
著者Mueller, J.M, Heine, A, Klebe, G.
登録日2017-09-12
公開日2018-10-10
最終更新日2019-05-15
実験手法X-RAY DIFFRACTION (1.49 Å)
主引用文献Conceptional Design of Self-Assembling Bisubstrate-like Inhibitors of Protein Kinase A Resulting in a Boronic Acid Glutamate Linkage
Acs Omega, 2019
5M70
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BU of 5m70 by Molmil
Crystal Structure of human RhoGAP mutated in its arginin finger (R85A) in complex with RhoA.GDP.AlF4- human
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Rho GTPase-activating protein 1, ...
著者Pellegrini, E, Bowler, M.W.
登録日2016-10-26
公開日2017-05-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Assessing the Influence of Mutation on GTPase Transition States by Using X-ray Crystallography, (19) F NMR, and DFT Approaches.
Angew. Chem. Int. Ed. Engl., 56, 2017
6EHR
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BU of 6ehr by Molmil
The crystal structure of the human LAMTOR-RagA CTD-RagC CTD complex
分子名称: Ragulator complex protein LAMTOR1, Ragulator complex protein LAMTOR2, Ragulator complex protein LAMTOR3, ...
著者Scheffzek, K, Naschberger, A.
登録日2017-09-14
公開日2017-10-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.898 Å)
主引用文献Crystal structure of the human lysosomal mTORC1 scaffold complex and its impact on signaling.
Science, 358, 2017
1U55
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BU of 1u55 by Molmil
Crystal structure of an oxygen binding H-NOX domain related to soluble guanylate cyclases (oxygen complex)
分子名称: CHLORIDE ION, Heme-based Methyl-accepting Chemotaxis Protein, OXYGEN MOLECULE, ...
著者Pellicena, P, Karow, D.S, Boon, E.M, Marletta, M.A, Kuriyan, J.
登録日2004-07-27
公開日2004-08-31
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Crystal structure of an oxygen-binding heme domain related to soluble guanylate cyclases.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1S1C
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BU of 1s1c by Molmil
Crystal structure of the complex between the human RhoA and Rho-binding domain of human ROCKI
分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, Rho-associated, ...
著者Dvorsky, R, Blumenstein, L, Vetter, I.R, Ahmadian, M.R.
登録日2004-01-06
公開日2004-02-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural Insights into the Interaction of ROCKI with the Switch Regions of RhoA.
J.Biol.Chem., 279, 2004
1TX4
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BU of 1tx4 by Molmil
RHO/RHOGAP/GDP(DOT)ALF4 COMPLEX
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, P50-RHOGAP, ...
著者Rittinger, K, Walker, P.A, Smerdon, S.J, Gamblin, S.J.
登録日1997-07-29
公開日1998-09-16
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structure at 1.65 A of RhoA and its GTPase-activating protein in complex with a transition-state analogue.
Nature, 389, 1997
5JHG
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BU of 5jhg by Molmil
Crystal structure of the complex between the human RhoA and the DH/PH domain of human ARHGEF11
分子名称: GLYCEROL, Rho guanine nucleotide exchange factor 11, Transforming protein RhoA
著者Wang, R, Chen, Q, Zhang, H, Yan, Z, Li, J, Miao, L, Wang, F.
登録日2016-04-21
公開日2017-04-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystallization and preliminary X-ray crystallographic analysis of a small GTPase RhoA bound with its inhibitor and ARHGEF11
To Be Published
5JHH
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BU of 5jhh by Molmil
Crystal structure of the ternary complex between the human RhoA, its inhibitor and the DH/PH domain of human ARHGEF11
分子名称: 3-{3-[ethyl(quinolin-2-yl)amino]phenyl}propanoic acid, GLYCEROL, Rho guanine nucleotide exchange factor 11, ...
著者Lv, Z, Wang, R, Ma, L, Miao, Q, Wu, J, Yan, Z, Li, J, Miao, L, Wang, F.
登録日2016-04-21
公開日2017-04-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystallization and preliminary X-ray crystallographic analysis of a small GTPase RhoA bound with its inhibitor and PDZRhoGEF
To Be Published
5M6X
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BU of 5m6x by Molmil
Crystal Structure of human RhoGAP mutated in its arginine finger (R85A) in complex with RhoA.GDP.MgF3- human
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Rho GTPase-activating protein 1, ...
著者Pellegrini, E, Bowler, M.W.
登録日2016-10-26
公開日2017-05-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Assessing the Influence of Mutation on GTPase Transition States by Using X-ray Crystallography, (19) F NMR, and DFT Approaches.
Angew. Chem. Int. Ed. Engl., 56, 2017
5JCP
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BU of 5jcp by Molmil
RhoGAP domain of ARAP3 in complex with RhoA in the transition state
分子名称: Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3,Linker,Transforming protein RhoA, GUANOSINE-5'-DIPHOSPHATE, ...
著者Bao, H, Li, F, Wang, C, Wang, N, Jiang, Y, Tang, Y, Wu, J, Shi, Y.
登録日2016-04-15
公開日2016-06-22
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis for the Specific Recognition of RhoA by the Dual GTPase-activating Protein ARAP3
J.Biol.Chem., 291, 2016
3C1Y
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BU of 3c1y by Molmil
Structure of bacterial DNA damage sensor protein with co-purified and co-crystallized ligand
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, DNA integrity scanning protein disA
著者Witte, G, Hartung, S, Buttner, K, Hopfner, K.P.
登録日2008-01-24
公開日2008-05-06
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Biochemistry of a Bacterial Checkpoint Protein Reveals Diadenylate Cyclase Activity Regulated by DNA Recombination Intermediates
Mol.Cell, 30, 2008
3C21
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BU of 3c21 by Molmil
Structure of a bacterial DNA damage sensor protein with reaction product
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, DNA integrity scanning protein disA
著者Witte, G, Hartung, S, Buttner, K, Hopfner, K.P.
登録日2008-01-24
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural Biochemistry of a Bacterial Checkpoint Protein Reveals Diadenylate Cyclase Activity Regulated by DNA Recombination Intermediates
Mol.Cell, 30, 2008
3C23
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BU of 3c23 by Molmil
Structure of a bacterial DNA damage sensor protein with non-reactive Ligand
分子名称: 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE, DNA integrity scanning protein disA
著者Witte, G, Hartung, S, Buttner, K, Hopfner, K.P.
登録日2008-01-24
公開日2008-05-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural Biochemistry of a Bacterial Checkpoint Protein Reveals Diadenylate Cyclase Activity Regulated by DNA Recombination Intermediates
Mol.Cell, 30, 2008

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件を2024-07-17に公開中

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