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6WHE
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BU of 6whe by Molmil
Structure of phosphomimetic Rab8a GTPase (T72E) in the GTP-bound state
分子名称: GLYCEROL, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Waschbusch, D, Khan, A.R.
登録日2020-04-08
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Dual arginine recognition of LRRK2 phosphorylated Rab GTPases.
Biophys.J., 120, 2021
6WE3
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BU of 6we3 by Molmil
Human PARP14 (ARTD8), catalytic fragment in complex with compound 3
分子名称: 1,2-ETHANEDIOL, 2-{[(trans-4-hydroxycyclohexyl)sulfanyl]methyl}-8-methylquinazolin-4(3H)-one, DI(HYDROXYETHYL)ETHER, ...
著者Swinger, K.S, Schenkel, L.B, Kuntz, K.W.
登録日2020-04-01
公開日2021-03-24
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献A potent and selective PARP14 inhibitor decreases protumor macrophage gene expression and elicits inflammatory responses in tumor explants.
Cell Chem Biol, 28, 2021
7SAX
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BU of 7sax by Molmil
Structure of GldLM, the proton-powered motor that drives Type IX protein secretion and gliding motility in Sphingobacterium wenxiniae
分子名称: GldL, GldM
著者Hennell James, R, Deme, J.C, Lea, S.M.
登録日2021-09-23
公開日2022-03-23
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structures of the Type IX Secretion/Gliding Motility Motor from across the Phylum Bacteroidetes.
Mbio, 13, 2022
8IMK
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BU of 8imk by Molmil
D3-D4, D1-D2, D'3-D'4, D'1-D'2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster C)
分子名称: ApcA1, ApcA2, ApcB1, ...
著者Wang, C.H, Yang, C.H, Wu, H.Y, Jiang, H.W, Ho, M.C, Ho, M.Y.
登録日2023-03-07
公開日2023-10-25
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (2.48 Å)
主引用文献A structure of the relict phycobilisome from a thylakoid-free cyanobacterium.
Nat Commun, 14, 2023
7ROC
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BU of 7roc by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 7
分子名称: major capsid protein
著者Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
登録日2021-07-30
公開日2022-03-30
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
5KHG
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BU of 5khg by Molmil
HCN2 CNBD in complex with cytidine-3', 5'-cyclic monophosphate (cCMP)
分子名称: 4-amino-1-[(2S,4aR,6R,7R,7aS)-2,7-dihydroxy-2-oxidotetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinin-6-yl]pyrimidin-2(1H)-one, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
著者Ng, L.C.T, Putrenko, I, Baronas, V, Van Petegem, F, Accili, E.A.
登録日2016-06-14
公開日2016-09-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.241 Å)
主引用文献Cyclic Purine and Pyrimidine Nucleotides Bind to the HCN2 Ion Channel and Variably Promote C-Terminal Domain Interactions and Opening.
Structure, 24, 2016
6WE2
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BU of 6we2 by Molmil
Human PARP14 (ARTD8), catalytic fragment in complex with RBN012759
分子名称: 1,2-ETHANEDIOL, 7-(cyclopropylmethoxy)-5-fluoro-2-{[(trans-4-hydroxycyclohexyl)sulfanyl]methyl}quinazolin-4(3H)-one, Isoform 1 of Protein mono-ADP-ribosyltransferase PARP14
著者Swinger, K.K, Schenkel, L.B, Kuntz, K.W.
登録日2020-04-01
公開日2021-03-24
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献A potent and selective PARP14 inhibitor decreases protumor macrophage gene expression and elicits inflammatory responses in tumor explants.
Cell Chem Biol, 28, 2021
6WCU
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BU of 6wcu by Molmil
Crystal structure of coiled coil region of human septin 5
分子名称: Septin-5
著者Cabrejos, D.A.L, Cavini, I, Sala, F.A, Valadares, N.F, Pereira, H.M, Brandao-Neto, J, Nascimento, A.F.Z, Uson, I, Araujo, A.P.U, Garratt, R.C.
登録日2020-03-31
公開日2021-03-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Orientational Ambiguity in Septin Coiled Coils and its Structural Basis.
J.Mol.Biol., 433, 2021
7ROI
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BU of 7roi by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 12
分子名称: major capsid protein
著者Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
登録日2021-07-30
公開日2022-03-30
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
9BFR
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BU of 9bfr by Molmil
Cryo-EM structure of Bride of Sevenless extracellular domain (dimer, Sevenless-bound form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Protein bride of sevenless
著者Cerutti, G, Shapiro, L.
登録日2024-04-18
公開日2025-01-29
最終更新日2025-05-14
実験手法ELECTRON MICROSCOPY (3.19 Å)
主引用文献Structures and pH-dependent dimerization of the sevenless receptor tyrosine kinase.
Mol.Cell, 84, 2024
8IT0
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BU of 8it0 by Molmil
Cryo-EM structure of Crt-SPARTA-gRNA-tDNA dimer (conformation-2)
分子名称: DNA (45-mer), Piwi domain-containing protein, RNA (5'-R(P*UP*GP*AP*GP*GP*UP*AP*GP*UP*AP*GP*GP*UP*UP*GP*UP*AP*UP*AP*GP*U)-3'), ...
著者Gao, X, Shang, K, Zhu, K, Wang, L, Mu, Z, Fu, X, Yu, X, Qin, B, Zhu, H, Ding, W, Cui, S.
登録日2023-03-21
公開日2023-10-18
最終更新日2024-02-07
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Nucleic-acid-triggered NADase activation of a short prokaryotic Argonaute.
Nature, 625, 2024
8ITM
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BU of 8itm by Molmil
Cryo-EM structure of GIPR splice variant 2 (SV2) in complex with Gs protein
分子名称: Gastric inhibitory polypeptide receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Zhao, F.H, Hang, K.N, Zhou, Q.T, Shao, L.J, Li, H, Li, W.Z, Lin, S, Dai, A.T, Cai, X.Q, Liu, Y.Y, Xu, Y.N, Feng, W.B, Yang, D.H, Wang, M.W.
登録日2023-03-22
公開日2023-10-18
最終更新日2025-07-23
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Molecular basis of signal transduction mediated by the human GIPR splice variants.
Proc.Natl.Acad.Sci.USA, 120, 2023
6WZS
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BU of 6wzs by Molmil
Fusibacterium ulcerans ZTP riboswitch bound to m-1-pyridinyl AICA
分子名称: 5-amino-1-(pyridin-3-yl)-1H-imidazole-4-carboxamide, Fusibacterium ulcerans ZTP riboswitch, MAGNESIUM ION, ...
著者Pichling, P, Jones, C.P, Ferre-D'Amare, A.R, Tran, B.
登録日2020-05-14
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.23 Å)
主引用文献Parallel Discovery Strategies Provide a Basis for Riboswitch Ligand Design.
Cell Chem Biol, 27, 2020
7S4L
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BU of 7s4l by Molmil
CryoEM structure of Methylotuvimicrobium alcaliphilum 20Z pMMO in a POPC nanodisc at 2.46 Angstrom resolution
分子名称: (S)-2,3-bis(hexanoyloxy)propyl(2-(trimethylammonio)ethyl)phosphate, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, COPPER (II) ION, ...
著者Koo, C.W, Rosenzweig, A.C.
登録日2021-09-09
公開日2022-03-30
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (2.46 Å)
主引用文献Recovery of particulate methane monooxygenase structure and activity in a lipid bilayer.
Science, 375, 2022
8IVU
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BU of 8ivu by Molmil
Crystal Structure of Human NAMPT in complex with A4276
分子名称: N-[[4-(6-methyl-1,3-benzoxazol-2-yl)phenyl]methyl]pyridine-3-carboxamide, Nicotinamide phosphoribosyltransferase, PHOSPHATE ION
著者Kang, B.G, Cha, S.S.
登録日2023-03-28
公開日2023-10-11
実験手法X-RAY DIFFRACTION (2.09000921 Å)
主引用文献Discovery of a novel NAMPT inhibitor that selectively targets NAPRT-deficient EMT-subtype cancer cells and alleviates chemotherapy-induced peripheral neuropathy.
Theranostics, 13, 2023
8J83
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BU of 8j83 by Molmil
Crystal structure of formate dehydrogenase from Methylorubrum extorquens AM1
分子名称: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, DI(HYDROXYETHYL)ETHER, FE2/S2 (INORGANIC) CLUSTER, ...
著者Kobayashi, A, Taketa, M, Sowa, K, Kano, K, Higuchi, Y, Ogata, H.
登録日2023-04-29
公開日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and function relationship of formate dehydrogenases: an overview of recent progress.
Iucrj, 10, 2023
6WZR
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BU of 6wzr by Molmil
Fusibacterium ulcerans ZTP riboswitch bound to p-1-pyridinyl AICA
分子名称: 5-amino-1-(pyridin-4-yl)-1H-imidazole-4-carboxamide, Fusibacterium ulcerans ZTP riboswitch, MAGNESIUM ION, ...
著者Pichling, P, Jones, C.P, Ferre-D'Amare, A.R, Tran, B.
登録日2020-05-14
公開日2021-03-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Parallel Discovery Strategies Provide a Basis for Riboswitch Ligand Design.
Cell Chem Biol, 27, 2020
7RO5
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BU of 7ro5 by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 4
分子名称: major capsid protein
著者Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
登録日2021-07-30
公開日2022-03-30
最終更新日2025-06-04
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
8IFQ
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BU of 8ifq by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with compound 2
分子名称: (1R,2S,5S)-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-N-{(1Z,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
著者Su, H.X, Zhao, W.F, Xie, H, Nie, T.Q, Li, M.J, Xu, Y.C.
登録日2023-02-19
公開日2023-10-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Structure-based development and preclinical evaluation of the SARS-CoV-2 3C-like protease inhibitor simnotrelvir.
Nat Commun, 14, 2023
7S4I
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BU of 7s4i by Molmil
CryoEM structure of Methylococcus capsulatus (Bath) pMMO in a native lipid nanodisc at 2.26 Angstrom resolution
分子名称: 1,2-DIDECANOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-dihexanoyl-sn-glycero-3-phosphocholine, Ammonia monooxygenase/methane monooxygenase, ...
著者Koo, C.W, Rosenzweig, A.C.
登録日2021-09-09
公開日2022-03-30
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (2.26 Å)
主引用文献Recovery of particulate methane monooxygenase structure and activity in a lipid bilayer.
Science, 375, 2022
7ROD
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BU of 7rod by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 8
分子名称: major capsid protein
著者Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
登録日2021-07-30
公開日2022-03-30
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
8IFS
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BU of 8ifs by Molmil
SARS-CoV-2 3CL protease (3CLpro) in complex with compound 7
分子名称: (8~{S})-7-[(2~{S})-2-(~{tert}-butylcarbamoylamino)-3,3-dimethyl-butanoyl]-~{N}-[(1~{S})-1-cyano-2-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]ethyl]-1,4-dithia-7-azaspiro[4.4]nonane-8-carboxamide, 3C-like proteinase nsp5
著者Su, H.X, Zhao, W.F, Xie, H, Nie, T.Q, Li, M.J, Xu, Y.C.
登録日2023-02-19
公開日2023-10-18
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Structure-based development and preclinical evaluation of the SARS-CoV-2 3C-like protease inhibitor simnotrelvir.
Nat Commun, 14, 2023
6WSM
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BU of 6wsm by Molmil
Crystal structure of coiled coil region of human septin 8
分子名称: SULFATE ION, Septin-8
著者Cabrejos, D.A.L, Cavini, I, Sala, F.A, Valadares, N.F, Pereira, H.M, Brandao-Neto, J, Nascimento, A.F.Z, Uson, I, Araujo, A.P.U, Garratt, R.C.
登録日2020-05-01
公開日2021-03-17
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.451 Å)
主引用文献Orientational Ambiguity in Septin Coiled Coils and its Structural Basis.
J.Mol.Biol., 433, 2021
7RO2
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BU of 7ro2 by Molmil
Cryo-EM reconstruction of Sulfolobus monocaudavirus SMV1, symmetry 1
分子名称: major capsid protein
著者Wang, F, Cvirkaite-Krupovic, V, Krupovic, M, Egelman, E.H.
登録日2021-07-30
公開日2022-03-30
最終更新日2025-05-28
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Spindle-shaped archaeal viruses evolved from rod-shaped ancestors to package a larger genome.
Cell, 185, 2022
8IM2
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BU of 8im2 by Molmil
Crystal structure of human HPPD complexed with NTBC
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-{HYDROXY[2-NITRO-4-(TRIFLUOROMETHYL)PHENYL]METHYLENE}CYCLOHEXANE-1,3-DIONE, 4-hydroxyphenylpyruvate dioxygenase, ...
著者Dong, J, Lin, H.-Y, Yang, G.-F.
登録日2023-03-05
公開日2023-10-18
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.81 Å)
主引用文献Structure-based discovery of pyrazole-benzothiadiazole hybrid as human HPPD inhibitors.
Structure, 31, 2023

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