PDB: 1573 件ウェブページステータス検索Chemie searchBIRD

---

6UYI	hRpn13:hRpn2:K48-diubiquitin 分子名称: 26S proteasome non-ATPase regulatory subunit 1, Proteasomal ubiquitin receptor ADRM1, Ubiquitin 著者 Lu, X, Walters, K.J. 登録日 2019-11-13 公開日 2020-03-11 最終更新日 2022-03-16 実験手法 SOLUTION NMR 主引用文献 An Extended Conformation for K48 Ubiquitin Chains Revealed by the hRpn2:Rpn13:K48-Diubiquitin Structure. Structure, 28, 2020
6VAE	Mono-ubiquitinated Fanconi Anemia ID complex bound to ICL DNA 分子名称: DNA (29-MER), Fanconi anemia group D2 protein, Fanconi anemia, ... 著者 Pavletich, N.P. 登録日 2019-12-17 公開日 2020-03-18 最終更新日 2020-04-22 実験手法 ELECTRON MICROSCOPY (3.5 Å) 主引用文献 DNA clamp function of the monoubiquitinated Fanconi anaemia ID complex. Nature, 580, 2020
6WTG	SdeA DUB Domain in complex with Ubiquitin 分子名称: Ubiquitin, Ubiquitinating/deubiquitinating enzyme SdeA 著者 Kenny, S, Sheedlo, M, Das, C. 登録日 2020-05-02 公開日 2021-03-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.63 Å) 主引用文献 Insights into Ubiquitin Product Release in Hydrolysis Catalyzed by the Bacterial Deubiquitinase SdeA. Biochemistry, 60, 2021
1R4M	APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex 分子名称: Ubiquitin-like protein NEDD8, ZINC ION, amyloid beta precursor protein-binding protein 1, ... 著者 Walden, H, Podgorski, M.S, Holton, J.M, Schulman, B.A. 登録日 2003-10-07 公開日 2003-12-23 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The structure of the APPBP1-UBA3-NEDD8-ATP complex reveals the basis for selective ubiquitin-like protein activation by an E1. Mol.Cell, 12, 2003
1QZE	HHR23a protein structure based on residual dipolar coupling data 分子名称: UV excision repair protein RAD23 homolog A 著者 Walters, K.J, Lech, P.J, Goh, A.M, Wang, Q, Howley, P.M. 登録日 2003-09-16 公開日 2003-10-21 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 DNA-repair protein hHR23a alters its protein structure upon binding proteasomal subunit S5a Proc.Natl.Acad.Sci.USA, 100, 2003
1R4N	APPBP1-UBA3-NEDD8, an E1-ubiquitin-like protein complex with ATP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Ubiquitin-like protein NEDD8, ZINC ION, ... 著者 Walden, H, Podgorski, M.S, Holton, J.M, Schulman, B.A. 登録日 2003-10-07 公開日 2003-12-23 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.6 Å) 主引用文献 The structure of the APPBP1-UBA3-NEDD8-ATP complex reveals the basis for selective ubiquitin-like protein activation by an E1. Mol.Cell, 12, 2003
1S1Q	TSG101(UEV) domain in complex with Ubiquitin 分子名称: ACETIC ACID, COPPER (II) ION, SULFATE ION, ... 著者 Sundquist, W.I, Schubert, H.L, Kelly, B.N, Hill, G.C, Holton, J.M, Hill, C.P. 登録日 2004-01-07 公開日 2004-05-04 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Ubiquitin recognition by the human TSG101 protein Mol.Cell, 13, 2004
1UEL	Solution structure of ubiquitin-like domain of hHR23B complexed with ubiquitin-interacting motif of proteasome subunit S5a 分子名称: 26S proteasome non-ATPase regulatory subunit 4, UV excision repair protein RAD23 homolog B 著者 Fujiwara, K, Tenno, T, Jee, J.G, Sugasawa, K, Ohki, I, Kojima, C, Tochio, H, Hiroaki, H, Hanaoka, H, Shirakawa, M, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2003-05-19 公開日 2004-02-10 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Structure of the Ubiquitin-interacting Motif of S5a Bound to the Ubiquitin-like Domain of HR23B J.Biol.Chem., 279, 2004
4ZFR	Catalytic domain of Sst2 F403A mutant bound to ubiquitin 分子名称: 1,2-ETHANEDIOL, AMSH-like protease sst2, ZINC ION, ... 著者 Shrestha, R.K. 登録日 2015-04-21 公開日 2015-10-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Structure of Catalytic domain of Sst2 F403A mutant bound to ubiquitin at 1.7 Angstroms To Be Published
4ZFT	Catalytic domain of Sst2 F403W mutant bound to ubiquitin 分子名称: 1,2-ETHANEDIOL, AMSH-like protease sst2, Polyubiquitin-B, ... 著者 Bueno, A.N. 登録日 2015-04-21 公開日 2015-10-14 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.304 Å) 主引用文献 Structure of the catalytic domain of Sst2 mutant F403W bound to ubiquitin at 2.3 Angstroms To Be Published
4ZYN	Crystal Structure of Parkin E3 ubiquitin ligase (linker deletion; delta 86-130) 分子名称: E3 ubiquitin-protein ligase parkin, SULFATE ION, ZINC ION 著者 Lilov, A, Sauve, V, Trempe, J.F, Rodionov, D, Wang, J, Gehring, K. 登録日 2015-05-21 公開日 2015-08-19 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.54 Å) 主引用文献 A Ubl/ubiquitin switch in the activation of Parkin. Embo J., 34, 2015
1UZX	A complex of the Vps23 UEV with ubiquitin 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, SULFATE ION, UBIQUITIN, ... 著者 Teo, H, Williams, R.L. 登録日 2004-03-18 公開日 2004-03-30 最終更新日 2017-07-05 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural Insights Into Endosomal Sorting Complex Required for Transport (Escrt-I) Recognition of Ubiquitinated Proteins J.Biol.Chem., 279, 2004
5AF6	Structure of Lys33-linked diUb bound to Trabid NZF1 分子名称: TRABID, UBIQUITIN, ZINC ION 著者 Michel, M.A, Elliott, P.R, Swatek, K.N, Simicek, M, Pruneda, J.N, Wagstaff, J.L, Freund, S.M.V, Komander, D. 登録日 2015-01-19 公開日 2015-03-25 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Assembly and Specific Recognition of K29- and K33-Linked Polyubiquitin. Mol.Cell, 58, 2015
1VCB	THE VHL-ELONGINC-ELONGINB STRUCTURE 分子名称: PROTEIN (ELONGIN B), PROTEIN (ELONGIN C), PROTEIN (VHL) 著者 Stebbins, C.E, Kaelin, W.G, Pavletich, N.P. 登録日 1999-03-13 公開日 1999-04-21 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure of the VHL-ElonginC-ElonginB complex: implications for VHL tumor suppressor function. Science, 284, 1999
6A42	R1EN(5-223)-ubiquitin fusion 分子名称: ACETIC ACID, RNA-directed DNA polymerase homolog (R1),Polyubiquitin-C 著者 Maita, N. 登録日 2018-06-19 公開日 2018-10-24 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal Structure Determination of Ubiquitin by Fusion to a Protein That Forms a Highly Porous Crystal Lattice J. Am. Chem. Soc., 140, 2018
2ZNV	Crystal structure of human AMSH-LP DUB domain in complex with Lys63-linked ubiquitin dimer 分子名称: 1,2-ETHANEDIOL, AMSH-like protease, Ubiquitin, ... 著者 Sato, Y, Azusa, Y, Yamagata, A, Mimura, H, Wang, X, Yamashita, M, Ookata, K, Nureki, O, Iwai, K, Komada, M, Fukai, S. 登録日 2008-05-01 公開日 2008-09-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural basis for specific cleavage of Lys 63-linked polyubiquitin chains Nature, 455, 2008
6AQR	SAGA DUB module Ubp8(C146A)/Sgf11/Sus1/Sgf73 bound to monoubiquitin 分子名称: Polyubiquitin-C, SAGA-associated factor 11, SAGA-associated factor 73, ... 著者 Morrow, M.E, Morgan, M.T, Wolberger, C. 登録日 2017-08-21 公開日 2018-07-04 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Active site alanine mutations convert deubiquitinases into high-affinity ubiquitin-binding proteins. EMBO Rep., 19, 2018
6B7M	Crystal structure of Legionella effector sdeD (lpg2509) in complex with Ubiquitin 分子名称: Polyubiquitin-C, SdeD (lpg2509) 著者 Mao, Y, Akturk, A, Wasilko, J. 登録日 2017-10-04 公開日 2018-04-18 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Mechanism of phosphoribosyl-ubiquitination mediated by a single Legionella effector. Nature, 557, 2018
6B7O	Crystal structure of Legionella effector sdeD (lpg2509) H67A in complex with ADP-ribosylated Ubiquitin 分子名称: Polyubiquitin-C, SdeD (lpg2509) H67A, [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE 著者 Mao, Y, Akturk, A, Wasilko, J. 登録日 2017-10-04 公開日 2018-04-18 最終更新日 2020-01-01 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Mechanism of phosphoribosyl-ubiquitination mediated by a single Legionella effector. Nature, 557, 2018
3A1Q	Crystal structure of the mouse RAP80 UIMs in complex with Lys63-linked di-ubiquitin 分子名称: Ubiquitin, Ubiquitin interaction motif-containing protein 1 著者 Sato, Y, Yoshikawa, A, Mimura, H, Yamashita, M, Yamagata, A, Fukai, S. 登録日 2009-04-21 公開日 2009-07-21 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for specific recognition of Lys 63-linked polyubiquitin chains by tandem UIMs of RAP80 Embo J., 28, 2009
2Y5B	Structure of USP21 in complex with linear diubiquitin-aldehyde 分子名称: SULFATE ION, UBIQUITIN, UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 21, ... 著者 Ye, Y, Akutsu, M, Reyes-Turcu, F, Enchev, R.I, Wilkinson, K.D, Komander, D. 登録日 2011-01-12 公開日 2012-01-25 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Polyubiquitin Binding and Cross-Reactivity in the Usp Domain Deubiquitinase Usp21. Embo Rep., 12, 2011
6CFP	CRYSTAL STRUCTURE OF POLYMERASE ACID PROTEIN (PA) FROM INFLUENZA A VIRUS, WILSON-SMITH/1933 (H1N1) BOUND TO FRAGMENT HIT BSI-70565 1-{1-[4-FLUOROPHENYL)METHYL]-2-METHYL-1H-IMIDAZOL-4-YL}ETHAN-1-ONE 分子名称: 1-{1-[(4-fluorophenyl)methyl]-2-methyl-1H-imidazol-4-yl}ethan-1-one, DIMETHYL SULFOXIDE, Ubiquitin-like protein SMT3,Polymerase acidic protein 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-02-15 公開日 2018-04-11 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 CRYSTAL STRUCTURE OF POLYMERASE ACID PROTEIN (PA) FROM INFLUENZA A VIRUS, WILSON-SMITH/1933 (H1N1) BOUND TO FRAGMENT HIT BSI-70565 1-{1-[4-FLUOROPHENYL)METHYL]-2-METHYL-1H-IMIDAZOL-4-YL}ETHAN-1-ONE To Be Published
6ASR	REV1 UBM2 domain complex with ubiquitin 分子名称: DNA repair protein REV1, NICKEL (II) ION, Ubiquitin 著者 Miller, D.J. 登録日 2017-08-25 公開日 2018-06-20 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.356 Å) 主引用文献 Structures of REV1 UBM2 Domain Complex with Ubiquitin and with a Small-Molecule that Inhibits the REV1 UBM2-Ubiquitin Interaction. J. Mol. Biol., 430, 2018
6BI8	X-ray structure of MERS coronavirus papain-like protease in complex with human ISG15 分子名称: 1,2-ETHANEDIOL, CITRIC ACID, GLYCEROL, ... 著者 Clasman, J.C, Mesecar, A.D. 登録日 2017-11-01 公開日 2018-11-07 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.291 Å) 主引用文献 Decoupling deISGylating and deubiquitinating activities of the MERS virus papain-like protease. Antiviral Res., 174, 2020
6BVB	Crystal structure of HIF-2alpha-pVHL-elongin B-elongin C 分子名称: Elongin-B, Elongin-C, Hypoxia-Inducible Factor 2 alpha, ... 著者 Tarade, D, Ohh, M, Lee, J.E. 登録日 2017-12-12 公開日 2018-08-01 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.002 Å) 主引用文献 HIF-2 alpha-pVHL complex reveals broad genotype-phenotype correlations in HIF-2 alpha-driven disease. Nat Commun, 9, 2018

<12131415161718192021222324252627>