PDB: 13252 件ウェブページステータス検索Chemie searchBIRD

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6OLZ	Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP tRNA 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Li, W, Cate, J.H.D. 登録日 2019-04-17 公開日 2019-06-19 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule. Nat.Struct.Mol.Biol., 26, 2019
6OLG	Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA) 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ... 著者 Li, W, Cate, J.H.D. 登録日 2019-04-16 公開日 2019-06-19 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule. Nat.Struct.Mol.Biol., 26, 2019
6Q8Y	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex 分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ... 著者 Tesina, P, Heckel, E, Cheng, J, Buschauer, R, Kater, L, Berninghausen, O, Becker, T, Beckmann, R. 登録日 2018-12-16 公開日 2019-03-13 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Structure of the 80S ribosome-Xrn1 nuclease complex. Nat.Struct.Mol.Biol., 26, 2019
6H25	Human nuclear RNA exosome EXO-10-MPP6 complex 分子名称: Exosome complex component CSL4, Exosome complex component MTR3, Exosome complex component RRP4, ... 著者 Gerlach, P, Schuller, J.M, Falk, S, Basquin, J, Conti, E. 登録日 2018-07-13 公開日 2018-08-15 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Distinct and evolutionary conserved structural features of the human nuclear exosome complex. Elife, 7, 2018
6HCJ	Structure of the rabbit 80S ribosome on globin mRNA in the rotated state with A/P and P/E tRNAs 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... 著者 Juszkiewicz, S, Chandrasekaran, V, Lin, Z, Kraatz, S, Ramakrishnan, V, Hegde, R.S. 登録日 2018-08-15 公開日 2018-10-17 最終更新日 2018-11-14 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 ZNF598 Is a Quality Control Sensor of Collided Ribosomes. Mol. Cell, 72, 2018
7A01	The Halastavi arva virus intergenic region IRES promotes translation by the simplest possible initiation mechanism 分子名称: 18S RIBOSOMAL RNA, 28S RIBOSOMAL RNA, 40S RIBOSOMAL PROTEIN ES21, ... 著者 Abaeva, I, Vicens, Q, Bochler, A, Soufari, H, Simonetti, A, Pestova, T.V, Hashem, Y, Hellen, C.U.T. 登録日 2020-08-05 公開日 2020-12-30 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 The Halastavi arva Virus Intergenic Region IRES Promotes Translation by the Simplest Possible Initiation Mechanism. Cell Rep, 33, 2020
6HCF	Structure of the rabbit 80S ribosome stalled on globin mRNA at the stop codon 分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ... 著者 Juszkiewicz, S, Chandrasekaran, V, Lin, Z, Kraatz, S, Ramakrishnan, V, Hegde, R.S. 登録日 2018-08-14 公開日 2018-10-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 ZNF598 Is a Quality Control Sensor of Collided Ribosomes. Mol. Cell, 72, 2018
5A22	Structure of the L protein of vesicular stomatitis virus from electron cryomicroscopy 分子名称: VESICULAR STOMATITIS VIRUS L POLYMERASE, ZINC ION 著者 Liang, B, Li, Z, Jenni, S, Rameh, A.A, Morin, B.M, Grant, T, Grigorieff, N, Harrison, S.C, Whelan, S.P.J. 登録日 2015-05-06 公開日 2015-08-19 最終更新日 2019-04-24 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure of the L Protein of Vesicular Stomatitis Virus from Electron Cryomicroscopy. Cell(Cambridge,Mass.), 162, 2015
6ZVK	The Halastavi arva virus (HalV) intergenic region IRES promotes translation by the simplest possible initiation mechanism 分子名称: 18S RIBOSOMAL RNA, 28S RIBOSOMAL RNA, 40S RIBOSOMAL PROTEIN ES17, ... 著者 Abaeva, I.S, Vicens, Q, Bochler, A, Soufari, H, Simonetti, A, Pestova, T, Hashem, Y, Hellen, C.U.T. 登録日 2020-07-24 公開日 2020-12-23 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.49 Å) 主引用文献 The Halastavi arva Virus Intergenic Region IRES Promotes Translation by the Simplest Possible Initiation Mechanism. Cell Rep, 33, 2020
6ZUO	Human RIO1(kd)-StHA late pre-40S particle, structural state A (pre 18S rRNA cleavage) 分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ... 著者 Plassart, L, Shayan, R, Plisson-Chastang, C. 登録日 2020-07-23 公開日 2021-05-12 最終更新日 2024-05-01 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 The final step of 40S ribosomal subunit maturation is controlled by a dual key lock. Elife, 10, 2021
3E2B	Crystal structure of Dynein Light chain LC8 in complex with a peptide derived from Swallow 分子名称: ACETATE ION, Dynein light chain 1, cytoplasmic, ... 著者 Benison, G, Barbar, E, Karplus, P.A. 登録日 2008-08-05 公開日 2008-08-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The interplay of ligand binding and quaternary structure in the diverse interactions of dynein light chain LC8. J.Mol.Biol., 384, 2008
4QQD	Crystal Structure of tandem tudor domains of UHRF1 in complex with a small organic molecule 分子名称: 4-methyl-2,3,4,5,6,7-hexahydrodicyclopenta[b,e]pyridin-8(1H)-imine, E3 ubiquitin-protein ligase UHRF1, UNKNOWN ATOM OR ION 著者 Liu, Y, Tempel, W, Iqbal, A, Walker, J.R, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Min, J, Structural Genomics Consortium (SGC) 登録日 2014-06-27 公開日 2014-08-06 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 A small molecule antagonist of SMN disrupts the interaction between SMN and RNAP II. Nat Commun, 13, 2022
6J9F	Cryo-EM structure of Xanthomonos oryzae transcription elongation complex with the bacteriophage protein P7 分子名称: 45L, DNA (29-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 You, L.L, Zhang, Y. 登録日 2019-01-22 公開日 2019-07-17 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.95 Å) 主引用文献 Structural basis for transcription antitermination at bacterial intrinsic terminator. Nat Commun, 10, 2019
6J9E	Cryo-EM structure of Xanthomonos oryzae transcription elongation complex with NusA and the bacteriophage protein P7 分子名称: 45L, DNA (29-MER), DNA-directed RNA polymerase subunit alpha, ... 著者 You, L.L, Zhang, Y. 登録日 2019-01-22 公開日 2019-07-17 最終更新日 2024-03-27 実験手法 ELECTRON MICROSCOPY (3.41 Å) 主引用文献 Structural basis for transcription antitermination at bacterial intrinsic terminator. Nat Commun, 10, 2019
6MTB	Rabbit 80S ribosome with P- and Z-site tRNAs (unrotated state) 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Brown, A, Baird, M.R, Yip, M.C.J, Murray, J, Shao, S. 登録日 2018-10-19 公開日 2018-11-21 最終更新日 2019-05-15 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structures of translationally inactive mammalian ribosomes. Elife, 7, 2018
6MTC	Rabbit 80S ribosome with Z-site tRNA and IFRD2 (unrotated state) 分子名称: 18S rRNA, 28S rRNA, 40S ribosomal protein S10, ... 著者 Brown, A, Baird, M.R, Yip, M.C.J, Murray, J, Shao, S. 登録日 2018-10-19 公開日 2018-11-21 最終更新日 2019-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Structures of translationally inactive mammalian ribosomes. Elife, 7, 2018
6FSZ	Structure of the nuclear RNA exosome 分子名称: ATP-dependent RNA helicase DOB1, Exosome complex component CSL4, Exosome complex component MTR3, ... 著者 Schuller, J.M, Falk, S, Conti, E. 登録日 2018-02-20 公開日 2018-03-21 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (4.6 Å) 主引用文献 Structure of the nuclear exosome captured on a maturing preribosome. Science, 360, 2018
6PB5	The E. coli class-II CAP-dependent transcription activation complex at the state 1 architecture 分子名称: ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ... 著者 Liu, B, Shi, W. 登録日 2019-06-13 公開日 2020-03-18 最終更新日 2024-03-20 実験手法 ELECTRON MICROSCOPY (4.52 Å) 主引用文献 Visualization of two architectures in class-II CAP-dependent transcription activation Plos Biol., 18, 2020
8V7G	Human DNA polymerase eta-DNA-gemC-ended primer-dAMPNPP ternary complex with Mg2+ 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*(U7B))-3'), DNA (5'-D(*CP*AP*TP*TP*GP*TP*GP*AP*CP*GP*CP*T)-3'), ... 著者 Chang, C, Gao, Y. 登録日 2023-12-04 公開日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.52 Å) 主引用文献 Human DNA polymerase eta-DNA-araC-ended primer-dAMPNPP ternary complex with Mn2+ To Be Published
6QSN	Crystal structure of Yellow fever virus polymerase NS5A 分子名称: Genome polyprotein, S-ADENOSYL-L-HOMOCYSTEINE, SULFATE ION, ... 著者 Boura, E, Dubankova, A. 登録日 2019-02-21 公開日 2019-10-16 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (3.004 Å) 主引用文献 Structure of the yellow fever NS5 protein reveals conserved drug targets shared among flaviviruses. Antiviral Res., 169, 2019
4QWB	CRYSTAL STRUCTURE of DPO4 LINKER REGION P236A MUTANT WITH AN INCOMING D-dCDP 分子名称: ACETATE ION, CALCIUM ION, DEOXYCYTIDINE DIPHOSPHATE, ... 著者 Vyas, R, Suo, Z. 登録日 2014-07-16 公開日 2014-08-27 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and kinetic insights into binding and incorporation of L-nucleotide analogs by a Y-family DNA polymerase. Nucleic Acids Res., 42, 2014
6R9B	Cryo-EM structure of bacterial RNAP with a DNA mimic protein Ocr from T7 phage 分子名称: DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, DNA-directed RNA polymerase subunit beta', ... 著者 Ye, F.Z, Zhang, X.D. 登録日 2019-04-03 公開日 2020-02-26 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structural basis of transcription inhibition by the DNA mimic protein Ocr of bacteriophage T7 Elife, 2020
6ZV6	Human RIO1(kd)-StHA late pre-40S particle, structural state B (post 18S rRNA cleavage) 分子名称: 18S ribosomal RNA, 40S ribosomal protein S10, 40S ribosomal protein S11, ... 著者 Plassart, L, Shayan, R, Plisson-Chastang, C. 登録日 2020-07-24 公開日 2021-05-12 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 The final step of 40S ribosomal subunit maturation is controlled by a dual key lock. Elife, 10, 2021
8V7B	Human DNA polymerase eta-DNA-dT primer araCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion 分子名称: 4-amino-1-{5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}pyrimidin-2(1H)-one, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T*())-3'), ... 著者 Chang, C, Gao, Y. 登録日 2023-12-04 公開日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Human DNA polymerase eta-DNA-dT primer araCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion To Be Published
8V7D	Human DNA polymerase eta-DNA-dT primer rCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion 分子名称: CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T*())-3'), ... 著者 Chang, C, Gao, Y. 登録日 2023-12-04 公開日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Human DNA polymerase eta-DNA-dT primer rCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion To Be Published

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