Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8DNF
DownloadVisualize
BU of 8dnf by Molmil
Cryo-EM structure of nonmuscle gamma-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 2, ...
著者Arora, A.S, Huang, H.L, Heissler, S.M, Chinthalapudi, K.
登録日2022-07-11
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structural insights into actin isoforms.
Elife, 12, 2023
8DNH
DownloadVisualize
BU of 8dnh by Molmil
Cryo-EM structure of nonmuscle beta-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, cytoplasmic 1, ...
著者Arora, A.S, Huang, H.L, Heissler, S.M, Chinthalapudi, K.
登録日2022-07-11
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (2.99 Å)
主引用文献Structural insights into actin isoforms.
Elife, 12, 2023
8DND
DownloadVisualize
BU of 8dnd by Molmil
Crystal structure of Bothrops pirajai Piratoxin-I (PrTX-I) and synthetic inhibitor Varespladib (LY315920)
分子名称: ({3-[amino(oxo)acetyl]-1-benzyl-2-ethyl-1H-indol-4-yl}oxy)acetic acid, Basic phospholipase A2 homolog piratoxin-1, SULFATE ION
著者Salvador, G.H.M, Fontes, M.R.M.
登録日2022-07-11
公開日2023-08-02
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.018 Å)
主引用文献Structural basis of the myotoxic inhibition of the Bothrops pirajai PrTX-I by the synthetic varespladib.
Biochimie, 207, 2023
7YGF
DownloadVisualize
BU of 7ygf by Molmil
Crystal structure of YggS from Fusobacterium nucleatum
分子名称: Pyridoxal phosphate homeostasis protein, SULFATE ION
著者He, S.R, Chan, Y.Y, Wang, L.L, Bai, X, Bu, T.T, Zhang, J, Xu, Y.B.
登録日2022-07-11
公開日2022-10-12
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Structural and Functional Analysis of the Pyridoxal Phosphate Homeostasis Protein YggS from Fusobacterium nucleatum.
Molecules, 27, 2022
7YG5
DownloadVisualize
BU of 7yg5 by Molmil
Structure of human R-type voltage-gated CaV2.3-alpha2/delta1-beta1 channel complex in the topiramate-bound state
分子名称: 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Gao, Y, Zhao, Y.
登録日2022-07-11
公開日2023-11-29
最終更新日2024-07-03
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural insights into the allosteric effects of the antiepileptic drug topiramate on the Ca V 2.3 channel.
Biochem.Biophys.Res.Commun., 725, 2024
8DN8
DownloadVisualize
BU of 8dn8 by Molmil
CryoEM structure of the A. aeolicus WzmWzt transporter bound to 3-O-methyl-D-mannose
分子名称: 3-O-methyl-alpha-D-mannopyranose, ABC transporter, Transport permease protein
著者Spellmon, N, Zimmer, J.
登録日2022-07-10
公開日2022-09-21
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Molecular basis for polysaccharide recognition and modulated ATP hydrolysis by the O antigen ABC transporter.
Nat Commun, 13, 2022
8DN1
DownloadVisualize
BU of 8dn1 by Molmil
Q108K:K40L:T51C:T53A:R58L:Q38F:Q4F mutant of hCRBPII bound to synthetic fluorophore CM1V at pH 7.2
分子名称: (2E)-3-[7-(diethylamino)-2-oxo-2H-1-benzopyran-3-yl]prop-2-enal, bound form, GLYCEROL, ...
著者Bingham, C.R, Borhan, B, Geiger, J.H.
登録日2022-07-10
公開日2023-02-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Light controlled reversible Michael addition of cysteine: a new tool for dynamic site-specific labeling of proteins.
Analyst, 148, 2023
8DMY
DownloadVisualize
BU of 8dmy by Molmil
Cryo-EM structure of cardiac muscle alpha-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha cardiac muscle 1, ...
著者Arora, A.S, Huang, H.L, Heissler, S.M, Chinthalapudi, K.
登録日2022-07-09
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (3.07 Å)
主引用文献Structural insights into actin isoforms.
Elife, 12, 2023
7YFR
DownloadVisualize
BU of 7yfr by Molmil
Structure of GluN1a E698C-GluN2D NMDA receptor in cystines non-crosslinked state.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Zhang, J.L, Zhu, S.J, Zhang, M.
登録日2022-07-09
公開日2023-04-12
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFT
DownloadVisualize
BU of 7yft by Molmil
Crystal structure of the P450 BM3 heme domain mutant F87A/T268V/A82C/L181M in complex with N-imidazolyl-pentanoyl-L-phenylalanine, indane and hydroxylamine
分子名称: (2~{S})-2-(5-imidazol-1-ylpentanoylamino)-3-phenyl-propanoic acid, 2,3-dihydro-1H-indene, Bifunctional cytochrome P450/NADPH--P450 reductase, ...
著者Dong, S, Chen, J, Jiang, Y, Cong, Z, Feng, Y.
登録日2022-07-09
公開日2023-05-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Regiodivergent and Enantioselective Hydroxylation of C-H bonds by Synergistic Use of Protein Engineering and Exogenous Dual-Functional Small Molecules.
Angew.Chem.Int.Ed.Engl., 62, 2023
8DMO
DownloadVisualize
BU of 8dmo by Molmil
Structure of open, inward-facing MsbA from E. coli
分子名称: ATP-binding transport protein MsbA
著者Liu, C, Lyu, J, Laganowsky, A.D, Zhao, M.
登録日2022-07-08
公開日2022-12-14
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural basis for lipid and copper regulation of the ABC transporter MsbA.
Nat Commun, 13, 2022
8DMM
DownloadVisualize
BU of 8dmm by Molmil
Structure of the vanadate-trapped MsbA bound to KDL
分子名称: (2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-[(2~{R},4~{R},5~{R},6~{R})-6-[(1~{R})-1,2-bis(oxidanyl)ethyl]-2-carboxy-2-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-5-[[(3~{R})-3-dodecanoyloxytetradecanoyl]amino]-6-[[(2~{R},3~{S},4~{R},5~{R},6~{R})-3-oxidanyl-5-[[(3~{R})-3-oxidanyltetradecanoyl]amino]-4-[(3~{R})-3-oxidanyltetradecanoyl]oxy-6-phosphonooxy-oxan-2-yl]methoxy]-3-phosphonooxy-4-[(3~{R})-3-tetradecanoyloxytetradecanoyl]oxy-oxan-2-yl]methoxy]-5-oxidanyl-oxan-4-yl]oxy-4,5-bis(oxidanyl)oxane-2-carboxylic acid, ADP ORTHOVANADATE, ATP-binding transport protein MsbA
著者Liu, C, Lyu, J, Laganowsky, A.D, Zhao, M.
登録日2022-07-08
公開日2022-12-14
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structural basis for lipid and copper regulation of the ABC transporter MsbA.
Nat Commun, 13, 2022
8DMF
DownloadVisualize
BU of 8dmf by Molmil
Cryo-EM structure of the ribosome-bound Bacteroides thetaiotaomicron EF-G2
分子名称: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Tetracycline resistance protein TetQ
著者Wang, C, Han, W, Groisman, E.A, Liu, J.
登録日2022-07-08
公開日2023-01-04
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Gut colonization by Bacteroides requires translation by an EF-G paralog lacking GTPase activity.
Embo J., 2022
8DMK
DownloadVisualize
BU of 8dmk by Molmil
Cryo-EM reveals the molecular basis of laminin polymerization and LN-lamininopathies
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Laminin subunit alpha-1, ...
著者Kulczyk, A.W.
登録日2022-07-08
公開日2023-02-01
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Cryo-EM reveals the molecular basis oflaminin polymerization and LN-lamininopathies.
Nat Commun, 14, 2023
8DMX
DownloadVisualize
BU of 8dmx by Molmil
Cryo-EM structure of skeletal muscle alpha-actin
分子名称: ADENOSINE-5'-DIPHOSPHATE, Actin, alpha skeletal muscle, ...
著者Arora, A.S, Huang, H.L, Heissler, S.M, Chinthalapudi, K.
登録日2022-07-08
公開日2023-04-12
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Structural insights into actin isoforms.
Elife, 12, 2023
8DME
DownloadVisualize
BU of 8dme by Molmil
CYP102A1 in Open Conformation
分子名称: 6-methoxy-2-{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfanyl}-1H-benzimidazole, Bifunctional cytochrome P450/NADPH--P450 reductase, FLAVIN MONONUCLEOTIDE, ...
著者Su, M, Xu, H.
登録日2022-07-08
公開日2023-07-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Insight into the conformational dynamics of cytochrome P450 CYP102A1 enzyme using Cryo-EM
To Be Published
8DMG
DownloadVisualize
BU of 8dmg by Molmil
CYP102A1 in Closed Conformation
分子名称: 6-methoxy-2-{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfanyl}-1H-benzimidazole, Bifunctional cytochrome P450/NADPH--P450 reductase, FLAVIN MONONUCLEOTIDE, ...
著者Su, M, Xu, H.
登録日2022-07-08
公開日2023-07-19
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Insight into the conformational dynamics of cytochrome P450 CYP102A1 enzyme using Cryo-EM
To Be Published
7YFF
DownloadVisualize
BU of 7yff by Molmil
Structure of GluN1a-GluN2D NMDA receptor in complex with agonist glycine and competitive antagonist CPP.
分子名称: (2R)-4-(3-phosphonopropyl)piperazine-2-carboxylic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhang, J.L, Zhu, S.J, Zhang, M.
登録日2022-07-08
公開日2023-04-12
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFL
DownloadVisualize
BU of 7yfl by Molmil
Structure of GluN1a-GluN2D NMDA receptor in complex with agonists glycine and glutamate.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Zhang, J.L, Zhu, S.J, Zhang, M.
登録日2022-07-08
公開日2023-04-12
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFO
DownloadVisualize
BU of 7yfo by Molmil
Structure of GluN1a E698C-GluN2D NMDA receptor in cystines crosslinked state.
分子名称: Glutamate receptor ionotropic, NMDA 1, NMDA 2D
著者Zhang, J.L, Zhu, S.J, Zhang, M.
登録日2022-07-08
公開日2023-04-12
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (6.4 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFP
DownloadVisualize
BU of 7yfp by Molmil
The NuA4 histone acetyltransferase complex from S. cerevisiae
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ARP4 isoform 1, Actin, ...
著者Ji, L.T, Zhao, L.X, Xu, K, Gao, H.H, Zhou, Y, Kornberg, R.D, Zhang, H.Q.
登録日2022-07-08
公開日2023-04-19
実験手法ELECTRON MICROSCOPY (4 Å)
主引用文献Structure of the NuA4 histone acetyltransferase complex.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YFN
DownloadVisualize
BU of 7yfn by Molmil
Core module of the NuA4 complex in S. cerevisiae
分子名称: ADENOSINE-5'-TRIPHOSPHATE, ARP4 isoform 1, Actin, ...
著者Ji, L.T, Zhao, L.X, Xu, K, Gao, H.H, Zhou, Y, Kornberg, R.D, Zhang, H.Q.
登録日2022-07-08
公開日2023-03-08
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of the NuA4 histone acetyltransferase complex.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YFG
DownloadVisualize
BU of 7yfg by Molmil
Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine and glutamate (major class in asymmetry)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Zhang, M, Zhang, J, Guo, F, Li, Y, Zhu, S.
登録日2022-07-08
公開日2023-03-29
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFM
DownloadVisualize
BU of 7yfm by Molmil
Structure of GluN1b-GluN2D NMDA receptor in complex with agonists glycine and glutamate.
分子名称: Glutamate receptor ionotropic, NMDA 2D, Isoform 6 of Glutamate receptor ionotropic, ...
著者Zhang, J.L, Zhu, S.J, Zhang, M.
登録日2022-07-08
公開日2023-03-29
最終更新日2023-08-02
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023
7YFH
DownloadVisualize
BU of 7yfh by Molmil
Structure of the Rat GluN1-GluN2C NMDA receptor in complex with glycine, glutamate and (R)-PYD-106
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUTAMIC ACID, ...
著者Zhang, M, Zhang, J, Guo, F, Li, Y, Zhu, S.
登録日2022-07-08
公開日2023-03-29
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Distinct structure and gating mechanism in diverse NMDA receptors with GluN2C and GluN2D subunits.
Nat.Struct.Mol.Biol., 30, 2023

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon