PDB: 3712 件ウェブページステータス検索Chemie searchBIRD

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9FBL	STRUCTURE OF HUMAN PROTEIN KINASE CK2 CATALYTIC SUBUNIT (CK2ALPHA, CSNK2A1 gene product) IN COMPLEX WITH THE CYCLIC PEPTIDOMIMETIC COMPOUND FMP35 DISCOVERED BY HIGH-THROUGHPUT SCREENING 分子名称: Casein kinase II subunit alpha, Cyclic peptidomimetic compound FMP35, NICOTINIC ACID, ... 著者 Werner, C, Niefind, K, Eimermacher, S, Pietsch, M, Lindenblatt, D. 登録日 2024-05-14 公開日 2025-06-11 実験手法 X-RAY DIFFRACTION (2.18 Å) 主引用文献 Structure of human protein kinase CK2 catalytic subunit (CK2alpha) in complex with the cyclic peptidomimetic compound FMP35 discovered by high-throughput screening To Be Published
3SEP	E. coli (lacZ) beta-galactosidase (S796A) 分子名称: Beta-galactosidase, DIMETHYL SULFOXIDE, MAGNESIUM ION, ... 著者 Jancewicz, L.J, Wheatley, R.W, Sutendra, G, Lee, M, Fraser, M, Huber, R.E. 登録日 2011-06-10 公開日 2012-01-18 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Ser-796 of Beta-Galactosidase (E. coli) Plays a Key Role in Maintaining an Optimum Balance between the Opened and Closed Conformations of the Catalytically Important Active Site Loop Arch.Biochem.Biophys., 517, 2012
3S6L	Crystal structure of a YadA-like head domain of the trimeric autotransporter adhesin BoaA from Burkholderia pseudomallei solved by iodide ion SAD phasing 分子名称: CHLORIDE ION, Hep_Hag family, IODIDE ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2011-05-25 公開日 2011-06-22 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of a YadA-like head domain of the trimeric autotransporter adhesin BoaA from Burkholderia pseudomallei To be Published
4D65	Structure of porin Omp-Pst2 from P. stuartii; the asymmetric unit contains a dimer of trimers. 分子名称: 3-HYDROXY-TETRADECANOIC ACID, LAURYL DIMETHYLAMINE-N-OXIDE, MYRISTIC ACID, ... 著者 Nasrallah, C, Colletier, J.P. 登録日 2014-11-08 公開日 2016-03-09 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Porin self-association enables cell-to-cell contact inProvidencia stuartiifloating communities. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2H88	Avian Mitochondrial Respiratory Complex II at 1.8 Angstrom Resolution 分子名称: AZIDE ION, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ... 著者 Huang, L.S, Shen, J.T, Wang, A.C, Berry, E.A. 登録日 2006-06-06 公開日 2006-06-20 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the Biochim.Biophys.Acta, 1757
8EK5	Engineered scFv 10LH bound to PHOX2B/HLA-A24:02 分子名称: 10LH single chain fragment variable (scFv), Beta-2-microglobulin, GLYCEROL, ... 著者 Garfinkle, S.E, Florio, T.J, Sgourakis, N.G. 登録日 2022-09-20 公開日 2023-12-06 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 Structural principles of peptide-centric chimeric antigen receptor recognition guide therapeutic expansion. Sci Immunol, 8, 2023
4JX5	Structure of the carboxyl transferase domain from Rhizobium etli pyruvate carboxylase with pyruvate 分子名称: CHLORIDE ION, GLYCEROL, MAGNESIUM ION, ... 著者 Lietzan, A.D, St Maurice, M. 登録日 2013-03-27 公開日 2013-05-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 A Substrate-induced Biotin Binding Pocket in the Carboxyltransferase Domain of Pyruvate Carboxylase. J.Biol.Chem., 288, 2013
4JX4	Structure of the carboxyl transferase domain from Rhizobium etli pyruvate carboxylase 分子名称: CHLORIDE ION, Pyruvate carboxylase, ZINC ION 著者 Lietzan, A.D, St Maurice, M. 登録日 2013-03-27 公開日 2013-05-29 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (2.98 Å) 主引用文献 A Substrate-induced Biotin Binding Pocket in the Carboxyltransferase Domain of Pyruvate Carboxylase. J.Biol.Chem., 288, 2013
4JX6	Structure of the carboxyl transferase domain Y628A from Rhizobium etli pyruvate carboxylase with pyruvate 分子名称: GLYCEROL, MAGNESIUM ION, PYRUVIC ACID, ... 著者 Lietzan, A.D, St Maurice, M. 登録日 2013-03-27 公開日 2013-05-29 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 A Substrate-induced Biotin Binding Pocket in the Carboxyltransferase Domain of Pyruvate Carboxylase. J.Biol.Chem., 288, 2013
6Q6G	Cryo-EM structure of the APC/C-Cdc20-Cdk2-cyclinA2-Cks2 complex, the D1 box class 分子名称: Anaphase-promoting complex subunit 1,Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ... 著者 Zhang, S, Barford, D. 登録日 2018-12-11 公開日 2019-09-11 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cyclin A2 degradation during the spindle assembly checkpoint requires multiple binding modes to the APC/C. Nat Commun, 10, 2019
6Q6H	Cryo-EM structure of the APC/C-Cdc20-Cdk2-cyclinA2-Cks2 complex, the D2 box class 分子名称: Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, Anaphase-promoting complex subunit 13, ... 著者 Zhang, S, Barford, D. 登録日 2018-12-11 公開日 2019-09-11 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cyclin A2 degradation during the spindle assembly checkpoint requires multiple binding modes to the APC/C. Nat Commun, 10, 2019
1X7K	PV5 nmr solution structure 分子名称: Polyphemusin I 著者 Powers, J.P, Tan, A, Ramamoorthy, A, Hancock, R.E. 登録日 2004-08-14 公開日 2005-07-26 最終更新日 2024-11-20 実験手法 SOLUTION NMR 主引用文献 Solution structure and interaction of the antimicrobial polyphemusins with lipid membranes Biochemistry, 44, 2005
9N9S	Model of APC/C-CDC20-UBE2C from H3/H4-bound complex 分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ... 著者 Skrajna, A, Bodrug, T, Brown, N.G, McGinty, R.K. 登録日 2025-02-11 公開日 2025-04-16 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 APC/C-mediated ubiquitylation of extranucleosomal histone complexes lacking canonical degrons. Nat Commun, 16, 2025
9MJN	Near complete virion structure of bacteriophage PhiTE 分子名称: Cyanophage baseplate Pam3 plug gp18 domain-containing protein, Dit-like phage tail protein N-terminal domain-containing protein, Head stabilization/decoration protein, ... 著者 Hodgkinson-Bean, J, Ayala, R. 登録日 2024-12-16 公開日 2025-04-16 実験手法 ELECTRON MICROSCOPY (12.7 Å) 主引用文献 Global structural survey of the flagellotropic myophage phi TE infecting agricultural pathogen Pectobacterium atrosepticum. Nat Commun, 16, 2025
9N9R	Model of APC/C-CDC20-UBE2C from H2A/H2B-bound complex 分子名称: Anaphase-promoting complex subunit 1, Anaphase-promoting complex subunit 10, Anaphase-promoting complex subunit 11, ... 著者 Skrajna, A, Bodrug, T, Brown, N.G, McGinty, R.K. 登録日 2025-02-11 公開日 2025-04-16 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 APC/C-mediated ubiquitylation of extranucleosomal histone complexes lacking canonical degrons. Nat Commun, 16, 2025
5MQ7	Structure of AaLS-13 分子名称: 6,7-dimethyl-8-ribityllumazine synthase 著者 Sasaki, E, Boehringer, D, Leibundgut, M, Ban, N, Hilvert, D. 登録日 2016-12-20 公開日 2017-03-22 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (5.2 Å) 主引用文献 Structure and assembly of scalable porous protein cages. Nat Commun, 8, 2017
5A31	Structure of the human APC-Cdh1-Hsl1-UbcH10 complex. 分子名称: ANAPHASE-PROMOTING COMPLEX SUBUNIT 1, ANAPHASE-PROMOTING COMPLEX SUBUNIT 10, ANAPHASE-PROMOTING COMPLEX SUBUNIT 11, ... 著者 Chang, L, Zhang, Z, Yang, J, Mclaughlin, S.H, Barford, D. 登録日 2015-05-26 公開日 2015-11-18 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (4.3 Å) 主引用文献 Atomic Structure of the Apc/C and its Mechanism of Protein Ubiquitination. Nature, 522, 2015
7P83	Crystal structure of Apo form of S-adenosylmethionine synthetase from Methanocaldococcus jannaschii 分子名称: S-adenosylmethionine synthase 著者 Herrmann, E, Peters, A, Cornelissen, N.V, Rentmeister, A, Kuemmel, D. 登録日 2021-07-21 公開日 2021-11-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.218 Å) 主引用文献 Visible-Light Removable Photocaging Groups Accepted by MjMAT Variant: Structural Basis and Compatibility with DNA and RNA Methyltransferases. Chembiochem, 23, 2022
1CS0	Crystal structure of carbamoyl phosphate synthetase complexed at CYS269 in the small subunit with the tetrahedral mimic l-glutamate gamma-semialdehyde 分子名称: ADENOSINE-5'-DIPHOSPHATE, CARBAMOYL PHOSPHATE SYNTHETASE: LARGE SUBUNIT, CARBAMOYL PHOSPHATE SYNTHETASE: SMALL SUBUNIT, ... 著者 Thoden, J.B, Huang, X, Raushel, F.M, Holden, H.M. 登録日 1999-08-16 公開日 1999-12-10 最終更新日 2025-03-26 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The small subunit of carbamoyl phosphate synthetase: snapshots along the reaction pathway. Biochemistry, 38, 1999
4UI9	Atomic structure of the human Anaphase-Promoting Complex 分子名称: ANAPHASE-PROMOTING COMPLEX SUBUNIT 1, ANAPHASE-PROMOTING COMPLEX SUBUNIT 10, ANAPHASE-PROMOTING COMPLEX SUBUNIT 11, ... 著者 Chang, L, Zhang, Z, Yang, J, McLaughlin, S.H, Barford, D. 登録日 2015-03-27 公開日 2015-06-17 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Atomic Structure of the Apc and its Mechanism of Protein Ubiquitination Nature, 522, 2015
8Z20	Crystal structure analysis of thermotolerant Oscillatoria Phycocyanin 分子名称: GLYCEROL, PHYCOCYANOBILIN, Phycocyanin subunit alpha, ... 著者 Patel, S.N, Sonani, R.R, Gupta, G.D, Upadhyaya, C.T, Sonavane, B.P, Singh, N.K, Kumar, V, Madamwar, D. 登録日 2024-04-12 公開日 2025-04-16 最終更新日 2025-06-11 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure and stability of phycocyanin from thermotolerant Oscillatoria. Febs Lett., 599, 2025
8YS9	Crystal structure of Phosphatidylethanolamine N-methyltransferase from R. thermophilum complexed with DMPE and SAH 分子名称: DODECYL-BETA-D-MALTOSIDE, L(+)-TARTARIC ACID, Phosphatidylethanolamine N-methyltransferase/phosphatidyl-N-methylethanolamine N-methyltransferase, ... 著者 Kim, J, Salsabila, S.D. 登録日 2024-03-22 公開日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.46 Å) 主引用文献 Structural insights into phosphatidylethanolamine N -methyltransferase PmtA mediating bacterial phosphatidylcholine synthesis. Sci Adv, 10, 2024
1CE8	CARBAMOYL PHOSPHATE SYNTHETASE FROM ESCHERICHIS COLI WITH COMPLEXED WITH THE ALLOSTERIC LIGAND IMP 分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, INOSINIC ACID, ... 著者 Thoden, J.B, Raushel, F.M, Holden, H.M. 登録日 1999-03-18 公開日 1999-07-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The binding of inosine monophosphate to Escherichia coli carbamoyl phosphate synthetase. J.Biol.Chem., 274, 1999
3CPW	The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI 分子名称: 23S RIBOSOMAL RNA, 5'-R(*CP*CP*AP*(PHE)*(ACA))-3', 50S ribosomal protein L10E, ... 著者 Ippolito, J.A, Kanyo, Z.K, Wang, D, Franceschi, F.J, Moore, P.B, Steitz, T.A, Duffy, E.M. 登録日 2008-04-01 公開日 2008-07-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structure of the Oxazolidinone Antibiotic Linezolid Bound to the 50S Ribosomal Subunit J.Med.Chem., 51, 2008
3CZJ	E. COLI (lacZ) BETA-GALACTOSIDASE (N460T) IN COMPLEX WITH D-GALCTOPYRANOSYL-1-ONE 分子名称: Beta-galactosidase, D-galactonolactone, DIMETHYL SULFOXIDE, ... 著者 Huber, R.E, Dugdale, M.L, Fraser, M.E, Tammam, S.D. 登録日 2008-04-29 公開日 2009-04-07 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Practical Considerations When Using Temperature to Obtain Rate Constants and Activation Thermodynamics of Enzymes with Two Catalytic Steps: Native and N460T-beta-Galactosidase (E. coli) as Examples. Protein J., 28, 2009

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