4D65

Structure of porin Omp-Pst2 from P. stuartii; the asymmetric unit contains a dimer of trimers.

Summary for 4D65

Related4D5X 4D64
DescriptorPORIN 2, LAURYL DIMETHYLAMINE-N-OXIDE, 3-HYDROXY-TETRADECANOIC ACID, ... (6 entities in total)
Functional Keywordstransport protein, steric-zipper, bacterial junction, dimer of trimers
Biological sourcePROVIDENCIA STUARTII
Total number of polymer chains6
Total molecular weight268527.01
Authors
Nasrallah, C.,Colletier, J.P. (deposition date: 2014-11-08, release date: 2016-03-09, Last modification date: 2018-04-18)
Primary citation
El-Khatib, M.,Nasrallah, C.,Lopes, J.,Tran, Q.T.,Tetreau, G.,Basbous, H.,Fenel, D.,Gallet, B.,Lethier, M.,Bolla, J.M.,Pages, J.M.,Vivaudou, M.,Weik, M.,Winterhalter, M.,Colletier, J.P.
Porin self-association enables cell-to-cell contact inProvidencia stuartiifloating communities.
Proc. Natl. Acad. Sci. U.S.A., 115:E2220-E2228, 2018
PubMed: 29476011 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.1714582115
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.2 Å)
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Structure validation

ClashscoreRamachandran outliersSidechain outliersRSRZ outliers80.0%3.6%1.7%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution

More Asymmetric unit images

Molmil generated image of 4d65
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Molmil generated image of 4d65
rotated about x axis by 90°
Molmil generated image of 4d65
rotated about y axis by 90°

More Biological unit images

Molmil generated image of 4d65
no rotation
Molmil generated image of 4d65
rotated about x axis by 90°
Molmil generated image of 4d65
rotated about y axis by 90°
(*)In the case of coarse surface representation, the asymmetric unit is shown as red ribbon representation.
Coordinate files for Biological unit (4d65.pdb1.gz [408.67 KB])
Coordinate files for Biological unit (4d65.pdb2.gz [391.61 KB])