PDB: 238582 件ウェブページステータス検索Chemie searchBIRD

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4LV3	AmpC beta-lactamase in complex with (3,5-di-tert-butylphenyl) boronic acid 分子名称: (3,5-di-tert-butylphenyl)boronic acid, Beta-lactamase, PHOSPHATE ION 著者 London, N, Eidam, O, Shoichet, B.K. 登録日 2013-07-25 公開日 2014-07-30 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Covalent docking of large libraries for the discovery of chemical probes. Nat.Chem.Biol., 10, 2014
4NBJ	D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with D-tyrosyl-3'-aminoadenosine at 2.20 Angstrom resolution 分子名称: 3'-deoxy-3'-(D-tyrosylamino)adenosine, D-tyrosyl-tRNA(Tyr) deacylase 著者 Ahmad, S, Routh, S.B, Kamarthapu, V, Sankaranarayanan, R. 登録日 2013-10-23 公開日 2013-12-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Mechanism of chiral proofreading during translation of the genetic code. Elife, 2, 2013
4NU1	Crystal structure of a transition state mimic of the GSK-3/Axin complex bound to phosphorylated N-terminal auto-inhibitory pS9 peptide 分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Axin-1, ... 著者 Chu, M.L.-H, Stamos, J.L, Enos, M.D, Shah, N, Weis, W.I. 登録日 2013-12-03 公開日 2014-03-26 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis of GSK-3 inhibition by N-terminal phosphorylation and by the Wnt receptor LRP6. Elife, 3, 2014
4NM3	Crystal structure of GSK-3/Axin complex bound to phosphorylated N-terminal auto-inhibitory pS9 peptide 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ADENOSINE-5'-DIPHOSPHATE, Axin-1, ... 著者 Chu, M.L.-H, Stamos, J.L, Enos, M.D, Shah, N, Weis, W.I. 登録日 2013-11-14 公開日 2014-03-26 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural basis of GSK-3 inhibition by N-terminal phosphorylation and by the Wnt receptor LRP6. Elife, 3, 2014
4LV2	AmpC beta-lactamase in complex with [1-(6-chloropyrimidin-4-yl)-1H-pyrazol-4-yl] boronic acid 分子名称: Beta-lactamase, PHOSPHATE ION, [1-(6-chloropyrimidin-4-yl)-1H-pyrazol-4-yl]boronic acid 著者 London, N, Eidam, O, Shoichet, B.K. 登録日 2013-07-25 公開日 2014-07-30 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Covalent docking of large libraries for the discovery of chemical probes. Nat.Chem.Biol., 10, 2014
4OGR	crystal structure of P-TEFb complex with AFF4 and Tat 分子名称: ADENOSINE, AF4/FMR2 family member 4, Cyclin-T1, ... 著者 Schulze-Gahmen, U, Alber, T. 登録日 2014-01-16 公開日 2014-05-07 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 AFF4 binding to Tat-P-TEFb indirectly stimulates TAR recognition of super elongation complexes at the HIV promoter. Elife, 3, 2014
4NBI	D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with D-tyrosyl-3'-aminoadenosine at 1.86 Angstrom resolution 分子名称: 3'-deoxy-3'-(D-tyrosylamino)adenosine, D-tyrosyl-tRNA(Tyr) deacylase, TRIETHYLENE GLYCOL 著者 Ahmad, S, Routh, S.B, Kamarthapu, V, Sankaranarayanan, R. 登録日 2013-10-23 公開日 2013-12-18 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Mechanism of chiral proofreading during translation of the genetic code. Elife, 2, 2013
4NM7	Crystal structure of GSK-3/Axin complex bound to phosphorylated Wnt receptor LRP6 e-motif 分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, ADENOSINE-5'-DIPHOSPHATE, Axin-1, ... 著者 Stamos, J.L, Chu, M.L.-H, Enos, M.D, Shah, N, Weis, W.I. 登録日 2013-11-14 公開日 2014-03-26 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of GSK-3 inhibition by N-terminal phosphorylation and by the Wnt receptor LRP6. Elife, 3, 2014
4NM5	Crystal structure of GSK-3/Axin complex bound to phosphorylated Wnt receptor LRP6 c-motif 分子名称: ADENOSINE-5'-DIPHOSPHATE, Axin-1, CHLORIDE ION, ... 著者 Stamos, J.L, Chu, M.L.-H, Enos, M.D, Shah, N, Weis, W.I. 登録日 2013-11-14 公開日 2014-03-26 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis of GSK-3 inhibition by N-terminal phosphorylation and by the Wnt receptor LRP6. Elife, 3, 2014
4JTA	Crystal structure of Kv1.2-2.1 paddle chimera channel in complex with Charybdotoxin 分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION, ... 著者 MacKinnon, R, Banerjee, A, Lee, A, Campbell, E. 登録日 2013-03-23 公開日 2013-06-12 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of a pore-blocking toxin in complex with a eukaryotic voltage-dependent K(+) channel. Elife, 2, 2013
4JTD	Crystal structure of Kv1.2-2.1 paddle chimera channel in complex with Lys27Met mutant of Charybdotoxin 分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION, ... 著者 Banerjee, A, Lee, A, Campbell, E, MacKinnon, R. 登録日 2013-03-23 公開日 2013-06-12 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.54 Å) 主引用文献 Structure of a pore-blocking toxin in complex with a eukaryotic voltage-dependent K(+) channel. Elife, 2, 2013
4JTC	Crystal structure of Kv1.2-2.1 paddle chimera channel in complex with Charybdotoxin in Cs+ 分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, CESIUM ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Banerjee, A, Lee, A, Campbell, E, MacKinnon, R. 登録日 2013-03-23 公開日 2013-06-12 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.56 Å) 主引用文献 Structure of a pore-blocking toxin in complex with a eukaryotic voltage-dependent K(+) channel. Elife, 2, 2013
1J4V	CYANOVIRIN-N 分子名称: CYANOVIRIN-N 著者 Clore, G.M, Bewley, C.A. 登録日 2001-11-21 公開日 2002-03-06 最終更新日 2024-11-06 実験手法 SOLUTION NMR 主引用文献 Using conjoined rigid body/torsion angle simulated annealing to determine the relative orientation of covalently linked protein domains from dipolar couplings. J.Magn.Reson., 154, 2002
1J47	3D Solution NMR Structure of the M9I Mutant of the HMG-Box Domain of the Human Male Sex Determining Factor SRY Complexed to DNA 分子名称: 5'-D(*CP*CP*TP*GP*CP*AP*CP*AP*AP*AP*CP*AP*CP*C)-3', 5'-D(*GP*GP*TP*GP*TP*TP*TP*GP*TP*GP*CP*AP*GP*G)-3', SEX-DETERMINING REGION Y PROTEIN 著者 Clore, G.M, Murphy, E.C. 登録日 2001-07-23 公開日 2001-10-03 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Structural basis for SRY-dependent 46-X,Y sex reversal: modulation of DNA bending by a naturally occurring point mutation. J.Mol.Biol., 312, 2001
1J46	3D Solution NMR Structure of the Wild Type HMG-BOX Domain of the Human Male Sex Determining Factor Sry Complexed to DNA 分子名称: 5'-D(*CP*CP*TP*GP*CP*AP*CP*AP*AP*AP*CP*AP*CP*C)-3', 5'-D(*GP*GP*TP*GP*TP*TP*TP*GP*TP*GP*CP*AP*GP*G)-3', SEX-DETERMINING REGION Y PROTEIN 著者 Clore, G.M, Murphy, E.C. 登録日 2001-07-23 公開日 2001-10-03 最終更新日 2023-12-27 実験手法 SOLUTION NMR 主引用文献 Structural basis for SRY-dependent 46-X,Y sex reversal: modulation of DNA bending by a naturally occurring point mutation. J.Mol.Biol., 312, 2001
8RPC	Crystal structure of PfCLK3 with TCMDC-135051 分子名称: 1,2-ETHANEDIOL, 4-[2-[5-(diethylaminomethyl)-2-methoxy-phenyl]-1~{H}-pyrrolo[2,3-b]pyridin-4-yl]-2-propan-2-yl-benzoic acid, GLYCEROL, ... 著者 Yelland, T.S, Benazir, A, Hole, A. 登録日 2024-01-15 公開日 2024-11-06 最終更新日 2024-11-27 実験手法 X-RAY DIFFRACTION (2.079 Å) 主引用文献 Targeting Pf CLK3 with Covalent Inhibitors: A Novel Strategy for Malaria Treatment. J.Med.Chem., 67, 2024
9B1Q	Crystal Structure of human Tryptophan 2,3-dioxygenase in complex with PYN1 inhibitor 分子名称: (5P)-1-[(imidazolidin-1-yl)methyl]-5-(1H-indol-3-yl)-1H-1,2,3-benzotriazole, PROTOPORPHYRIN IX CONTAINING FE, Tryptophan 2,3-dioxygenase, ... 著者 Geeraerts, Z, Yeh, S.-R. 登録日 2024-03-13 公開日 2024-08-21 最終更新日 2024-09-11 実験手法 X-RAY DIFFRACTION (2.624 Å) 主引用文献 Structural Insights into Protein-Inhibitor Interactions in Human Tryptophan Dioxygenase. J.Med.Chem., 67, 2024
7NPS	Structure of the periplasmic assembly from the ESX-5 inner membrane complex, C1 model 分子名称: ESX-5 secretion system ATPase EccB5, Mycosin-5 著者 Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C. 登録日 2021-02-28 公開日 2021-05-26 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (3.81 Å) 主引用文献 Structure and dynamics of a mycobacterial type VII secretion system. Nature, 593, 2021
7NPT	Cytosolic bridge of an intact ESX-5 inner membrane complex 分子名称: ESX-5 secretion system protein EccC5, ESX-5 secretion system protein EccD5 著者 Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C. 登録日 2021-02-28 公開日 2021-05-26 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.27 Å) 主引用文献 Structure and dynamics of a mycobacterial type VII secretion system. Nature, 593, 2021
4WIP	DIX domain of human Dvl2 分子名称: PENTAETHYLENE GLYCOL, Segment polarity protein dishevelled homolog DVL-2 著者 Fiedler, M, Bienz, M, Madrzak, J, Chin, J.W. 登録日 2014-09-26 公開日 2015-05-13 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.691 Å) 主引用文献 Ubiquitination of the Dishevelled DIX domain blocks its head-to-tail polymerization. Nat Commun, 6, 2015
9N9D	MicroED structure of papain co-crystallized with E-64C 分子名称: N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-2-METHYL-BUTANE, Papain 著者 Vlahakis, N, Rodriguez, J.A. 登録日 2025-02-10 公開日 2025-03-26 実験手法 ELECTRON CRYSTALLOGRAPHY (2.2 Å) 主引用文献 Combining MicroED and native mass spectrometry for structural discovery of enzyme-biosynthetic inhibitor complexes. Biorxiv, 2025
7NP7	Structure of an intact ESX-5 inner membrane complex, Composite C1 model 分子名称: ESX-5 secretion system ATPase EccB5, ESX-5 secretion system protein EccC5, ESX-5 secretion system protein EccD5, ... 著者 Fahrenkamp, D, Bunduc, C.M, Wald, J, Ummels, R, Bitter, W, Houben, E.N.G, Marlovits, T.C. 登録日 2021-02-26 公開日 2021-06-02 最終更新日 2024-10-16 実験手法 ELECTRON MICROSCOPY (4.03 Å) 主引用文献 Structure and dynamics of a mycobacterial type VII secretion system. Nature, 593, 2021
9BRZ	V0-only V-ATPase and synaptophysin complex in mouse brain isolated synaptic vesicles 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Wang, C, Jiang, W, Yang, K, Wang, X, Guo, Q, Brunger, A.T. 登録日 2024-05-12 公開日 2024-06-19 最終更新日 2024-11-13 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure and topography of the synaptic V-ATPase-synaptophysin complex. Nature, 631, 2024
9BRY	V0-only V-ATPase in synaptophysin gene knock-out mouse brain isolated synaptic vesicles 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Wang, C, Jiang, W, Yang, K, Wang, X, Guo, Q, Brunger, A.T. 登録日 2024-05-12 公開日 2024-06-19 最終更新日 2024-11-20 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Structure and topography of the synaptic V-ATPase-synaptophysin complex. Nature, 631, 2024
6TRC	Cryo- EM structure of the Thermosynechococcus elongatus photosystem I in the presence of cytochrome c6 分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ... 著者 Koelsch, A, Radon, C, Baumert, A, Buerger, J, Mielke, T, Lisdat, F, Zouni, A, Wendler, P. 登録日 2019-12-18 公開日 2020-09-16 最終更新日 2024-10-23 実験手法 ELECTRON MICROSCOPY (2.98 Å) 主引用文献 Current limits of structural biology: The transient interaction between cytochrome c6 and photosystem I Curr.Opin.Struct.Biol., 2, 2020

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