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2JB1
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The L-amino acid oxidase from Rhodococcus opacus in complex with L- alanine
分子名称: ALANINE, FLAVIN-ADENINE DINUCLEOTIDE, L-AMINO ACID OXIDASE
著者Faust, A, Niefind, K, Hummel, W, Schomburg, D.
登録日2006-12-01
公開日2007-01-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The Structure of a Bacterial L-Amino Acid Oxidase from Rhodococcus Opacus Gives New Evidence for the Hydride Mechanism for Dehydrogenation
J.Mol.Biol., 367, 2007
7KS0
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BU of 7ks0 by Molmil
GluK2/K5 with 6-Cyano-7-nitroquinoxaline-2,3-dione (CNQX)
分子名称: Glutamate receptor ionotropic, kainate 2, kainate 5,Green fluorescent protein chimera
著者Khanra, N, Brown, P.M.G.E, Perozzo, A.M, Bowie, D, Meyerson, J.R.
登録日2020-11-20
公開日2021-03-24
最終更新日2021-07-07
実験手法ELECTRON MICROSCOPY (5.3 Å)
主引用文献Architecture and structural dynamics of the heteromeric GluK2/K5 kainate receptor.
Elife, 10, 2021
3H7X
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A transition from strong right-handed to canonical left-handed supercoiling in a conserved coiled coil segment of trimeric autotransporter adhesins - the wildtype structure
分子名称: Adhesin yadA
著者Zeth, K, Hernandez-Alvarez, B, Lupas, A.N.
登録日2009-04-28
公開日2010-03-31
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献A transition from strong right-handed to canonical left-handed supercoiling in a conserved coiled-coil segment of trimeric autotransporter adhesins.
J.Struct.Biol., 170, 2010
7KS3
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GluK2/K5 with L-Glu
分子名称: Glutamate receptor ionotropic, kainate 2, kainate 5,Green fluorescent protein chimera
著者Khanra, N, Brown, P.M.G.E, Perozzo, A.M, Bowie, D, Meyerson, J.R.
登録日2020-11-20
公開日2021-03-24
最終更新日2021-07-07
実験手法ELECTRON MICROSCOPY (5.8 Å)
主引用文献Architecture and structural dynamics of the heteromeric GluK2/K5 kainate receptor.
Elife, 10, 2021
2JIF
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BU of 2jif by Molmil
Structure of human short-branched chain acyl-CoA dehydrogenase (ACADSB)
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, COENZYME A PERSULFIDE, ...
著者Pike, A.C.W, Hozjan, V, Smee, C, Niesen, F.H, Kavanagh, K.L, Umeano, C, Turnbull, A.P, von Delft, F, Weigelt, J, Edwards, A, Arrowsmith, C.H, Sundstrom, M, Oppermann, U.
登録日2007-02-28
公開日2007-04-03
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal Structure of Human Short-Branched Chain Acyl-Coa Dehydrogenase
To be Published
2PNO
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Crystal structure of human leukotriene C4 synthase
分子名称: DODECYL-BETA-D-MALTOSIDE, GLUTATHIONE, Leukotriene C4 synthase
著者Ago, H, Kanaoka, Y, Irikura, D, Lam, B.K, Shimamura, T, Austen, K.F, Miyano, M.
登録日2007-04-24
公開日2007-08-07
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Crystal structure of a human membrane protein involved in cysteinyl leukotriene biosynthesis
Nature, 448, 2007
3BG0
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BU of 3bg0 by Molmil
Architecture of a Coat for the Nuclear Pore Membrane
分子名称: Nucleoporin NUP145, Protein SEC13 homolog
著者Hoelz, A.
登録日2007-11-23
公開日2008-01-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Architecture of a coat for the nuclear pore membrane.
Cell(Cambridge,Mass.), 131, 2007
7D4F
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BU of 7d4f by Molmil
Structure of COVID-19 RNA-dependent RNA polymerase bound to suramin
分子名称: 8-(3-(3-aminobenzamido)-4-methylbenzamido)naphthalene-1,3,5-trisulfonic acid, Non-structural protein 7, Non-structural protein 8, ...
著者Li, Z, Yin, W, Zhou, Z, Yu, X, Xu, H.
登録日2020-09-23
公開日2020-11-11
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.57 Å)
主引用文献Structural basis for inhibition of the SARS-CoV-2 RNA polymerase by suramin.
Nat.Struct.Mol.Biol., 28, 2021
3AZB
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BU of 3azb by Molmil
Beta-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Plasmodium falciparum in complex with NAS91-11
分子名称: 5-chloro-8-[(3-chlorobenzyl)oxy]quinoline, Beta-hydroxyacyl-ACP dehydratase, GLYCEROL
著者Maity, K, Venkata, B.S, Kapoor, N, Surolia, N, Surolia, A, Suguna, K.
登録日2011-05-21
公開日2012-02-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis for the functional and inhibitory mechanisms of beta-hydroxyacyl-acyl carrier protein dehydratase (FabZ) of Plasmodium falciparum
J.Struct.Biol., 176, 2011
2JB5
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Fab fragment in complex with small molecule hapten, crystal form-1
分子名称: 2-{(1E,3Z,5E,7E)-7-[3,3-DIMETHYL-5-SULFO-1-(2-SULFOETHYL)-1,3-DIHYDRO-2H-INDOL-2-YLIDENE]-4-METHYLHEPTA-1,3,5-TRIEN-1-YL}-3,3-DIMETHYL-5-SULFO-1-(2-SULFOETHYL)-3H-INDOLIUM, FAB FRAGMENT MOR03268 HEAVY CHAIN, FAB FRAGMENT MOR03268 LIGHT CHAIN
著者Hillig, R.C, Baesler, S, Malawski, G, Badock, V, Bahr, I, Schirner, M, Licha, K.
登録日2006-12-03
公開日2008-01-08
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Fab Mor03268 Triggers Absorption Shift of a Diagnostic Dye Via Packaging in a Solvent-Shielded Fab Dimer Interface
J.Mol.Biol., 377, 2008
7D6N
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BU of 7d6n by Molmil
Crystal structure of tick-borne encephalitis virus RNA-dependent RNA polymerase
分子名称: MAGNESIUM ION, Tick-borne encephalitis virus RNA-dependent RNA polymerase, ZINC ION
著者Yang, J, Jing, X, Gong, P.
登録日2020-10-01
公開日2020-12-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.168 Å)
主引用文献Crystal structure of tick-borne encephalitis virus
Nucleic Acids Res., 2020
2JK0
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BU of 2jk0 by Molmil
Structural and functional insights into Erwinia carotovora L- asparaginase
分子名称: ASPARTIC ACID, L-ASPARAGINASE
著者Papageorgiou, A.C, Posypanova, G.A, Andersson, C.S, Sokolov, N.N, Krasotkina, J.
登録日2008-05-23
公開日2008-08-05
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Functional Insights Into Erwinia Carotovora L-Asparaginase.
FEBS J., 275, 2008
7KNS
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BU of 7kns by Molmil
Cryo-EM structure of jack bean urease
分子名称: NICKEL (II) ION, PHOSPHATE ION, Urease
著者Feathers, J.R, Spoth, K.A, Fromme, J.C.
登録日2020-11-05
公開日2021-03-24
最終更新日2021-04-21
実験手法ELECTRON MICROSCOPY (2.77 Å)
主引用文献Experimental evaluation of super-resolution imaging and magnification choice in single-particle cryo-EM.
J Struct Biol X, 5, 2021
3H5X
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Crystal Structure of 2'-amino-2'-deoxy-cytidine-5'-triphosphate bound to Norovirus GII RNA polymerase
分子名称: 2'-amino-2'-deoxycytidine 5'-(tetrahydrogen triphosphate), 5'-R(*UP*GP*CP*CP*CP*GP*GP*G)-3', 5'-R(P*UP*GP*CP*CP*CP*GP*GP*GP*C)-3', ...
著者Zamyatkin, D.F, Parra, F, Machin, A, Grochulski, P, Ng, K.K.S.
登録日2009-04-22
公開日2009-05-19
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.77 Å)
主引用文献Binding of 2'-amino-2'-deoxycytidine-5'-triphosphate to norovirus polymerase induces rearrangement of the active site.
J.Mol.Biol., 390, 2009
7DB8
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BU of 7db8 by Molmil
Crystal structure of Mycobacterium tuberculosis phenylalanyl-tRNA synthetase in complex with compound PF-3845
分子名称: N-pyridin-3-yl-4-[[3-[5-(trifluoromethyl)pyridin-2-yl]oxyphenyl]methyl]piperidine-1-carboxamide, Phenylalanine--tRNA ligase alpha subunit, Phenylalanine--tRNA ligase beta subunit, ...
著者Xu, M, Zhang, X, Xu, L, Chen, S.
登録日2020-10-19
公開日2021-01-13
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Re-discovery of PF-3845 as a new chemical scaffold inhibiting phenylalanyl-tRNA synthetase in Mycobacterium tuberculosis .
J.Biol.Chem., 2021
7DHR
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BU of 7dhr by Molmil
Cryo-EM structure of the full agonist isoprenaline-bound beta2 adrenergic receptor-Gs protein complex.
分子名称: Beta-2 adrenergic receptor, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ...
著者Yang, F, Ling, S.L, Zhou, Y.X, Zhang, Y.N, Lv, P, Liu, S.L, Fang, W, Sun, W.J, Hu, L.Y.A.
登録日2020-11-17
公開日2020-12-16
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Different Conformational Responses of the beta2-Adrenergic Receptor-Gs Complex upon Binding of the Partial Agonist Salbutamol or the Full Agonist Isoprenaline
Natl Sci Rev, 2020
3HBZ
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BU of 3hbz by Molmil
Crystal structure of a putative glycoside hydrolase (bt_2081) from bacteroides thetaiotaomicron vpi-5482 at 2.05 A resolution
分子名称: ACETATE ION, CACODYLATE ION, CALCIUM ION, ...
著者Joint Center for Structural Genomics (JCSG)
登録日2009-05-05
公開日2009-05-26
最終更新日2023-02-01
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structure of Bacteroides thetaiotaomicron BT2081 at 2.05 A resolution: the first structural representative of a new protein family that may play a role in carbohydrate metabolism.
Acta Crystallogr.,Sect.F, 66, 2010
3B46
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Crystal Structure of Bna3p, a Putative Kynurenine Aminotransferase from Saccharomyces cerevisiae
分子名称: Aminotransferase BNA3
著者Wogulis, M.
登録日2007-10-23
公開日2008-02-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Identification of Formyl Kynurenine Formamidase and Kynurenine Aminotransferase from Saccharomyces cerevisiae Using Crystallographic, Bioinformatic and Biochemical Evidence.
Biochemistry, 47, 2008
7CY8
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BU of 7cy8 by Molmil
Crystal Structure of CMD1 in complex with 5mC-DNA and vitamin C
分子名称: 1,2-ETHANEDIOL, ASCORBIC ACID, DNA (5'-D(P*(5CM)P*GP*CP*GP*CP*GP*GP*GP*A)-3'), ...
著者Li, W, Zhang, T, Sun, M, Ding, J.
登録日2020-09-03
公開日2020-12-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular mechanism for vitamin C-derived C 5 -glyceryl-methylcytosine DNA modification catalyzed by algal TET homologue CMD1.
Nat Commun, 12, 2021
7D7P
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Crystal structure of the phosphodiesterase domain of Salpingoeca rosetta rhodopsin phosphodiesterase
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, MAGNESIUM ION, ...
著者Ikuta, T, Shihoya, W, Yamashita, K, Nureki, O.
登録日2020-10-05
公開日2020-11-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural insights into the mechanism of rhodopsin phosphodiesterase.
Nat Commun, 11, 2020
7D7V
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Crystal Structure of the Domain1 of NAD+ Riboswitch with nicotinamide adenine dinucleotide (NAD+) and U1A protein
分子名称: 17delU1A (58-MER), GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Chen, H, Ren, A.M.
登録日2020-10-06
公開日2020-11-25
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural distinctions between NAD+ riboswitch domains 1 and 2 determine differential folding and ligand binding.
Nucleic Acids Res., 48, 2020
3B1M
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Crystal structure of the PPARgamma-LBD complexed with a cercosporamide derivative modulator Cerco-A
分子名称: (9aS)-8-acetyl-N-[(2-ethylnaphthalen-1-yl)methyl]-1,7-dihydroxy-3-methoxy-9a-methyl-9-oxo-9,9a-dihydrodibenzo[b,d]furan-4-carboxamide, Peroxisome proliferator-activated receptor gamma, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha
著者Matsui, Y, Hiroyuki, H.
登録日2011-07-05
公開日2011-08-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Pharmacology and in Vitro Profiling of a Novel Peroxisome Proliferator-Activated Receptor gamma Ligand, Cerco-A
Biol.Pharm.Bull., 34, 2011
7MTG
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Structure of the adeno-associated virus 9 capsid at pH 6.0
分子名称: Capsid protein VP1
著者Penzes, J.J, Chipman, P, Bhattacharya, N, Zeher, A, Huang, R, McKenna, R, Agbandje-McKenna, M.
登録日2021-05-13
公開日2021-07-21
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Adeno-associated Virus 9 Structural Rearrangements Induced by Endosomal Trafficking pH and Glycan Attachment.
J.Virol., 95, 2021
7D8J
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S. aureus SsbB with 5-FU
分子名称: 5-FLUOROURACIL, Single-stranded DNA-binding protein
著者Lin, E.S, Huang, Y.H, Huang, C.Y.
登録日2020-10-08
公開日2020-12-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Crystal structure of the single-stranded DNA-binding protein SsbB in complex with the anticancer drug 5-fluorouracil: Extension of the 5-fluorouracil interactome to include the oligonucleotide/oligosaccharide-binding fold protein
Biochem.Biophys.Res.Commun., 534, 2020
7MIJ
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Mouse TRPV3 in MSP2N2 nanodiscs, closed state at 4 degrees Celsius
分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, SODIUM ION, Transient receptor potential cation channel subfamily V member 3
著者Neuberger, A, Nadezhdin, K.D, Sobolevsky, A.I.
登録日2021-04-17
公開日2021-07-21
最終更新日2021-07-28
実験手法ELECTRON MICROSCOPY (1.98 Å)
主引用文献Structural mechanism of heat-induced opening of a temperature-sensitive TRP channel.
Nat.Struct.Mol.Biol., 28, 2021

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