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4V8T
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Cryo-EM Structure of the 60S Ribosomal Subunit in Complex with Arx1 and Rei1
分子名称: 25S RIBOSOMAL RNA, 5.8S RIBOSOMAL RNA, 5S RIBOSOMAL RNA, ...
著者Greber, B.J, Boehringer, D, Montellese, C, Ban, N.
登録日2012-08-07
公開日2014-07-09
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (8.1 Å)
主引用文献Cryo-Em Structures of Arx1 and Maturation Factors Rei1 and Jjj1 Bound to the 60S Ribosomal Subunit
Nat.Struct.Mol.Biol., 19, 2012
5VIN
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BU of 5vin by Molmil
Crystal Structure of the R515Q missense variant of human PGM1
分子名称: COBALT (II) ION, GLYCEROL, Phosphoglucomutase-1, ...
著者Stiers, K.M, Beamer, L.J.
登録日2017-04-17
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.60004282 Å)
主引用文献A Hotspot for Disease-Associated Variants of Human PGM1 Is Associated with Impaired Ligand Binding and Loop Dynamics.
Structure, 26, 2018
5VIE
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BU of 5vie by Molmil
Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase
分子名称: 2-{[(2E)-4-chlorobut-2-enoyl]amino}-2-deoxy-beta-D-glucopyranose, 2-{[(2E)-but-2-enoyl]amino}-2-deoxy-beta-D-glucopyranose, CKII, ...
著者Jiang, J, Li, B, Hu, C.-W, Worth, M, Fan, D, Li, H.
登録日2017-04-15
公開日2017-10-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Electrophilic probes for deciphering substrate recognition by O-GlcNAc transferase.
Nat. Chem. Biol., 13, 2017
2GAZ
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BU of 2gaz by Molmil
Mycobacterial lipoglycan presentation by CD1d
分子名称: (2R)-3-[(HYDROXY{[(2R,3R,5S,6R)-3,4,5-TRIHYDROXY-2,6-BIS(ALPHA-D-MANNOPYRANOSYLOXY)CYCLOHEXYL]OXY}PHOSPHORYL)OXY]PROPAN E-1,2-DIYL DIHEXADECANOATE, 2-acetamido-2-deoxy-beta-D-glucopyranose, T-cell surface glycoprotein CD1d1, ...
著者Zajonc, D.M.
登録日2006-03-09
公開日2006-09-26
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献Structural characterization of mycobacterial phosphatidylinositol mannoside binding to mouse CD1d.
J.Immunol., 177, 2006
2Y4E
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BU of 2y4e by Molmil
X-ray crystallographic structure of E. coli ppix-EfeB
分子名称: PEROXIDASE YCDB, PROTOPORPHYRIN IX, SULFATE ION, ...
著者Bamford, V.A, Andrews, S.C, Watson, K.A.
登録日2011-01-05
公開日2011-01-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Efeb, the Peroxidase Component of the Efeuob Bacterial Fe(II) Transport System, Also Shows Novel Removal of Iron from Heme
To be Published
6QKB
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BU of 6qkb by Molmil
Crystal structure of the beta-hydroxyaspartate aldolase of Paracoccus denitrificans
分子名称: D-3-hydroxyaspartate aldolase, MAGNESIUM ION, PYRIDOXAL-5'-PHOSPHATE
著者Zarzycki, J, Schada von Borzyskowski, L, Gilardet, A, Erb, T.J.
登録日2019-01-28
公開日2019-08-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.701 Å)
主引用文献Marine Proteobacteria metabolize glycolate via the beta-hydroxyaspartate cycle.
Nature, 575, 2019
6QLA
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BU of 6qla by Molmil
CRYSTAL STRUCTURE OF THE PMGL2 ESTERASE (point mutant 1) FROM PERMAFROST METAGENOMIC LIBRARY
分子名称: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE, CHLORIDE ION, MAGNESIUM ION, ...
著者Boyko, K.M, Garsia, D, Nikolaeva, A.Y, Korzhenevskiy, D.A, Kryukova, M.V, Petrovskaya, L.E, Novototskaya-Vlasova, K.A, Rivkina, E.M, Dolgikh, D.A, Kirpichnikov, M.P, Popov, V.O.
登録日2019-01-31
公開日2019-12-25
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献Crystal structure of PMGL2 esterase from the hormone-sensitive lipase family with GCSAG motif around the catalytic serine.
Plos One, 15, 2020
6QFA
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BU of 6qfa by Molmil
CryoEM structure of a beta3K279T GABA(A)R homomer in complex with histamine and megabody Mb25
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Gamma-aminobutyric acid receptor subunit beta-3,Gamma-aminobutyric acid receptor subunit beta-3, HISTAMINE, ...
著者Uchanski, T, Masiulis, S, Fischer, B, Kalichuk, V, Wohlkoening, A, Zoegg, T, Remaut, H, Vranken, W, Aricescu, A.R, Pardon, E, Steyaert, J.
登録日2019-01-09
公開日2021-08-04
実験手法ELECTRON MICROSCOPY (2.49 Å)
主引用文献Megabodies expand the nanobody toolkit for protein structure determination by single-particle cryo-EM.
Nat.Methods, 18, 2021
4V4M
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BU of 4v4m by Molmil
1.45 Angstrom Structure of STNV coat protein
分子名称: CALCIUM ION, Coat protein
著者Lane, S.W, Dennis, C.A, Lane, C.L, Trinh, C.H, Rizkallah, P.J, Stockley, P.G, Phillips, S.E.V.
登録日2011-04-28
公開日2014-07-09
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Construction and crystal structure of recombinant STNV capsids.
J.Mol.Biol., 413, 2011
6ZJH
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BU of 6zjh by Molmil
Trehalose transferase from Thermoproteus uzoniensis soaked with trehalose
分子名称: GLYCEROL, Trehalose phosphorylase/synthase, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Bento, I, Mestrom, L, Marsden, S.R, van der Eijk, H, Laustsen, J.U, Jeffries, C.M, Svergun, D.I, Hagedoorn, P.-H, Hanefeld, U.
登録日2020-06-29
公開日2020-11-25
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Anomeric Selectivity of Trehalose Transferase with Rare l-Sugars.
Acs Catalysis, 10, 2020
4V6S
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BU of 4v6s by Molmil
Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Agirrezabala, X, Liao, H, Schreiner, E, Fu, J, Ortiz-Meoz, R.F, Schulten, K, Green, R, Frank, J.
登録日2011-12-09
公開日2014-07-09
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (13.1 Å)
主引用文献Structural characterization of mRNA-tRNA translocation intermediates.
Proc.Natl.Acad.Sci.USA, 109, 2012
2Y50
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BU of 2y50 by Molmil
Crystal Structure of Collagenase G from Clostridium histolyticum at 2. 80 Angstrom Resolution
分子名称: CITRATE ANION, COLLAGENASE, HEXAETHYLENE GLYCOL, ...
著者Eckhard, U, Brandstetter, H.
登録日2011-01-11
公開日2011-09-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of Collagenase G Reveals a Chew-and -Digest Mechanism of Bacterial Collagenolysis
Nat.Struct.Mol.Biol., 18, 2011
6D9B
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BU of 6d9b by Molmil
Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex with UDP-glucose (open, oxidized)
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, ISOPROPYL ALCOHOL, SODIUM ION, ...
著者Wangkanont, K, Kiessling, L.L, Forest, K.T.
登録日2018-04-28
公開日2019-05-15
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Substrate recognition by FAD in UDP-galactopyranose mutase
To be published
4WA3
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BU of 4wa3 by Molmil
The crystal structure of neuraminidase from a H3N8 influenza virus isolated from New England harbor seals
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, NICKEL (II) ION, ...
著者Yang, H, Villanueva, J.M, Gubareva, L.V, Stevens, J.
登録日2014-08-28
公開日2015-01-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structural and Functional Analysis of Surface Proteins from an A(H3N8) Influenza Virus Isolated from New England Harbor Seals.
J.Virol., 89, 2015
4WD2
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BU of 4wd2 by Molmil
Crystal structure of an aromatic amino acid aminotransferase from Burkholderia cenocepacia J2315
分子名称: Aromatic-amino-acid transaminase TyrB, GLYCEROL
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2014-09-06
公開日2014-10-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of an aromatic amino acid aminotransferase from Burkholderia cenocepacia J2315
to be published
6DTN
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BU of 6dtn by Molmil
The structure of NTMT1 in complex with compound DC100-1
分子名称: (6D6)PPKRIA(NH2), DC100-1, N-terminal Xaa-Pro-Lys N-methyltransferase 1
著者Noinaj, N, Chen, D, Huang, R.
登録日2018-06-18
公開日2019-04-03
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.475 Å)
主引用文献Discovery of Bisubstrate Inhibitors for Protein N-Terminal Methyltransferase 1.
J. Med. Chem., 62, 2019
6ZJ1
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BU of 6zj1 by Molmil
Structure of an inactive E404Q variant of the catalytic domain of human endo-alpha-mannosidase MANEA in complex with tetrasaccharide N-glycan fragment and hexatungstotellurate(VI) TEW
分子名称: 6-tungstotellurate(VI), Glycoprotein endo-alpha-1,2-mannosidase, MAGNESIUM ION, ...
著者Sobala, L.F, Fernandes, P.Z, Hakki, Z, Thompson, A.J, Howe, J.D, Hill, M, Zitzmann, N, Davies, S, Stamataki, Z, Butters, T.D, Alonzi, D.S, Williams, S.J, Davies, G.J.
登録日2020-06-27
公開日2020-12-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.957 Å)
主引用文献Structure of human endo-alpha-1,2-mannosidase (MANEA), an antiviral host-glycosylation target.
Proc.Natl.Acad.Sci.USA, 117, 2020
5VNW
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BU of 5vnw by Molmil
Crystal structure of Nb.b201 bound to human serum albumin
分子名称: GLYCEROL, LAURIC ACID, Nb.b201, ...
著者McMahon, C, Kruse, A.C.
登録日2017-05-01
公開日2018-02-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Yeast surface display platform for rapid discovery of conformationally selective nanobodies.
Nat. Struct. Mol. Biol., 25, 2018
6DHW
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BU of 6dhw by Molmil
Crystal structure of primase iron-sulfur domain (266-457)
分子名称: DNA primase large subunit, IRON/SULFUR CLUSTER, SULFATE ION
著者Holt, M.E, Salay, L.E, Chazin, W.J.
登録日2018-05-21
公開日2018-12-19
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.013 Å)
主引用文献Functional and structural similarity of human DNA primase [4Fe4S] cluster domain constructs.
PLoS ONE, 13, 2018
4W1U
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BU of 4w1u by Molmil
Crystal structure of Rv3557c/KstR2, a transcriptional repressor involved in cholesterol metabolism in Mycobacterium tuberculosis
分子名称: HTH-type transcriptional repressor KstR2
著者Dawes, S.S, Kendall, S.K, Baker, E.N, Lott, J.S.
登録日2014-08-13
公開日2015-07-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.875 Å)
主引用文献Crystal structure of Rv3557c/KstR2, a transcriptional repressor involved in cholesterol metabolism in Mycobacterium tuberculosis.
To Be Published
2Y4D
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BU of 2y4d by Molmil
X-ray crystallographic structure of E. coli apo-EfeB
分子名称: ACETATE ION, GLYCEROL, PEROXIDASE YCDB, ...
著者Bamford, V.A, Andrews, S.C, Watson, K.A.
登録日2011-01-05
公開日2011-01-26
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Efeb, the Peroxidase Component of the Efeuob Bacterial Fe(II) Transport System, Also Shows Novel Removal of Iron from Heme
To be Published
4W4Z
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BU of 4w4z by Molmil
Structure of the EphA4 LBD in complex with peptide
分子名称: APY-bAla8.am peptide, Ephrin type-A receptor 4, GLYCEROL, ...
著者Lechtenberg, B.C, Mace, P.D, Riedl, S.J.
登録日2014-08-15
公開日2014-10-08
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.41 Å)
主引用文献Development and Structural Analysis of a Nanomolar Cyclic Peptide Antagonist for the EphA4 Receptor.
Acs Chem.Biol., 9, 2014
4W5M
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Prp peptide
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, PrP peptide
著者Yu, L, Lee, S.-J, Yee, V.
登録日2014-08-18
公開日2015-05-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations.
Biochemistry, 54, 2015
4W5Y
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BU of 4w5y by Molmil
Crystal structure of Prp pepttide
分子名称: Prp peptide
著者Yu, L, Lee, S.-J, Yee, V.
登録日2014-08-19
公開日2015-05-27
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.122 Å)
主引用文献Crystal Structures of Polymorphic Prion Protein beta 1 Peptides Reveal Variable Steric Zipper Conformations.
Biochemistry, 54, 2015
5VEC
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BU of 5vec by Molmil
Crystal Structure of the R515L missense variant of human PGM1
分子名称: GLYCEROL, MAGNESIUM ION, Phosphoglucomutase-1, ...
著者Stiers, K.M, Beamer, L.J.
登録日2017-04-04
公開日2018-06-27
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.20001626 Å)
主引用文献A Hotspot for Disease-Associated Variants of Human PGM1 Is Associated with Impaired Ligand Binding and Loop Dynamics.
Structure, 26, 2018

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