PDB: 243911 件ウェブページステータス検索Chemie searchBIRD

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4MT7	Crystal structure of collybistin I 分子名称: Rho guanine nucleotide exchange factor 9 著者 Schneeberger, D, Schindelin, H. 登録日 2013-09-19 公開日 2014-08-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.5 Å) 主引用文献 A conformational switch in collybistin determines the differentiation of inhibitory postsynapses. Embo J., 33, 2014
6MU0	Crystal Structure of Ribose-5-phosphate Isomerase B from Mycoplasma genitalium with bound Ribulose-5-phosphate 分子名称: Probable ribose-5-phosphate isomerase B, RIBULOSE-5-PHOSPHATE 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-10-22 公開日 2018-11-14 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Crystal Structure of Ribose-5-phosphate Isomerase B from Mycoplasma genitalium with bound Ribulose-5-phosphate to be published
6MVR	Structure of a bacterial ALDH16 分子名称: Aldehyde dehydrogenase, GLYCEROL, SULFATE ION 著者 Tanner, J.J, Liu, L. 登録日 2018-10-28 公開日 2018-12-26 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Crystal Structure of Aldehyde Dehydrogenase 16 Reveals Trans-Hierarchical Structural Similarity and a New Dimer. J. Mol. Biol., 431, 2019
6MX2	Crystal Structure of ClpP1 from Clostridium difficile 630. 分子名称: ATP-dependent Clp protease proteolytic subunit, GLYCEROL, SODIUM ION 著者 Lavey, N.P, Thomas, L.M, Duerfeldt, A.S. 登録日 2018-10-30 公開日 2018-11-14 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of ClpP1 from Clostridium difficile 630. To Be Published
4MU9	Crystal structure of a putative glycosylhydrolase (BT_3782) from Bacteroides thetaiotaomicron VPI-5482 at 1.89 A resolution 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Glycoside hydrolase family 73 著者 Joint Center for Structural Genomics (JCSG) 登録日 2013-09-20 公開日 2013-10-09 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Crystal structure of a putative glycosylhydrolase (BT_3782) from Bacteroides thetaiotaomicron VPI-5482 at 1.89 A resolution To be published
6MQS	Vaccine-elicited NHP FP-targeting HIV neutralizing antibody A12V163-a.01 in complex with HIV fusion peptide (residue 512-519) 分子名称: HIV fusion peptide residue 512-519, antibody A12V163-a.01 heavy chain, antibody A12V163-a.01 light chain 著者 Xu, K, Wang, Y, Kwong, P.D. 登録日 2018-10-10 公開日 2019-07-31 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.997 Å) 主引用文献 Antibody Lineages with Vaccine-Induced Antigen-Binding Hotspots Develop Broad HIV Neutralization. Cell, 178, 2019
4N14	Crystal structure of Cdc20 and apcin complex 分子名称: 2-(2-methyl-5-nitro-1H-imidazol-1-yl)ethyl [(1R)-2,2,2-trichloro-1-(pyrimidin-2-ylamino)ethyl]carbamate, Cell division cycle protein 20 homolog 著者 Luo, X, Tian, W, Yu, H. 登録日 2013-10-03 公開日 2014-08-20 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Synergistic blockade of mitotic exit by two chemical inhibitors of the APC/C. Nature, 514, 2014
6MYN	Crystal structure of murine NF-kappaB inducing kinase (NIK) bound to inhibitor R7 分子名称: (5s,7s)-9-fluoro-10-[(3R)-3-hydroxy-3-(5-methyl-1,2-oxazol-3-yl)but-1-yn-1-yl]-N~3~-methyl-6,7-dihydro-5H-5,7-methanoimidazo[2,1-a][2]benzazepine-2,3-dicarboxamide, Mitogen-activated protein kinase kinase kinase 14, SULFATE ION 著者 Harris, S.F, Smith, M, Barker, J. 登録日 2018-11-01 公開日 2019-08-07 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.744 Å) 主引用文献 Structure Based Design of Potent Selective Inhibitors of Protein Kinase D1 (PKD1). Acs Med.Chem.Lett., 10, 2019
6MS2	Crystal structure of the GH43 BlXynB protein from Bacillus licheniformis 分子名称: CALCIUM ION, Glycoside Hydrolase Family 43 著者 Zanphorlin, L.M, Morais, M.A.B, Diogo, J.A, Murakami, M.T. 登録日 2018-10-16 公開日 2019-04-17 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.494 Å) 主引用文献 Structure-guided design combined with evolutionary diversity led to the discovery of the xylose-releasing exo-xylanase activity in the glycoside hydrolase family 43. Biotechnol. Bioeng., 116, 2019
6MU9	Beta-lactamase penicillinase from Bacillus megaterium 分子名称: Beta-lactamase, SULFATE ION 著者 Osipiuk, J, Tesar, C, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2018-10-22 公開日 2018-11-07 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (0.97 Å) 主引用文献 Beta-lactamase penicillinase from Bacillus megaterium to be published
4N6D	Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio salexigens DSM2638 (Desal_3247), Target EFI-510112, phased with I3C, open complex, C-terminus of symmetry mate bound in ligand binding site 分子名称: 1,2-ETHANEDIOL, 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, CHLORIDE ION, ... 著者 Vetting, M.W, Al Obaidi, N.F, Stead, M, Attonito, J.D, Scott Glenn, A, Chowdhury, S, Evans, B, Hillerich, B, Love, J, Seidel, R.D, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI) 登録日 2013-10-11 公開日 2013-10-30 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.701 Å) 主引用文献 Experimental strategies for functional annotation and metabolism discovery: targeted screening of solute binding proteins and unbiased panning of metabolomes. Biochemistry, 54, 2015
6N4W	Tetragonal thermolysin (with 50% xylose) cryocooled in a nitrogen gas stream to 100 K 分子名称: CALCIUM ION, Thermolysin, ZINC ION, ... 著者 Juers, D.H, Harrison, K, Wu, B. 登録日 2018-11-20 公開日 2019-10-02 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 A comparison of gas stream cooling and plunge cooling of macromolecular crystals. J.Appl.Crystallogr., 52, 2019
6N56	Crystal structure of fumarate reductase, flavo protein subunit, from Helicobacter pylori G27 分子名称: Fumarate reductase, flavo protein subunit 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-11-21 公開日 2018-12-19 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Crystal structure of fumarate reductase, flavo protein subunit, from Helicobacter pylori G27 To be Published
6MYV	Sialidase26 co-crystallized with DANA-Gc 分子名称: 2,6-anhydro-3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-L-altro-non-2-enonic acid, Sialidase26 著者 Zaramela, L.S, Martino, C, Alisson-Silva, F, Rees, S.D, Diaz, S.L, Chuzel, L, Ganatra, M.B, Taron, C.H, Zuniga, C, Huang, J, Siegel, D, Chang, G, Varki, A, Zengler, K. 登録日 2018-11-02 公開日 2019-10-02 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Gut bacteria responding to dietary change encode sialidases that exhibit preference for red meat-associated carbohydrates. Nat Microbiol, 4, 2019
4N7O	Capturing the haemoglobin allosteric transition in a single crystal form; Crystal structure of half-liganded human haemoglobin with phosphate at 2.5 A resolution. 分子名称: Hemoglobin subunit alpha, Hemoglobin subunit beta, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Sugiyama, K, Shibayama, N, Park, S.Y. 登録日 2013-10-16 公開日 2014-04-02 最終更新日 2024-03-20 実験手法 X-RAY DIFFRACTION (2.502 Å) 主引用文献 Capturing the hemoglobin allosteric transition in a single crystal form J.Am.Chem.Soc., 136, 2014
6N6E	Vibrio cholerae Oligoribonuclease bound to pGA 分子名称: RNA (5'-R(P*GP*A)-3'), RNA exonuclease 2 homolog,Small fragment nuclease, SODIUM ION 著者 Lormand, J.D, Sondermann, H. 登録日 2018-11-26 公開日 2019-06-12 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.578 Å) 主引用文献 A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation. Elife, 8, 2019
6N72	Crystal Structure of ATPase delta1-79 Spa47 E267R 分子名称: ATP synthase SpaL/MxiB 著者 Morales, Y, Johnson, S.J, Demler, H.J, Dickenson, N.E. 登録日 2018-11-27 公開日 2019-06-19 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.735 Å) 主引用文献 Interfacial amino acids support Spa47 oligomerization and shigella type three secretion system activation. Proteins, 87, 2019
4N8O	Crystal structure of Mycobacterial FtsX extracellular domain, bromide derivative 分子名称: BROMIDE ION, Cell division protein FtsX, POTASSIUM ION 著者 Mavrici, D. 登録日 2013-10-17 公開日 2014-05-28 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Mycobacterium tuberculosis FtsX extracellular domain activates the peptidoglycan hydrolase, RipC. Proc.Natl.Acad.Sci.USA, 111, 2014
4MQD	Crystal structure of ComJ, inhibitor of the DNA degrading activity of NucA, from Bacillus subtilis 分子名称: DNA-entry nuclease inhibitor 著者 Chang, C, Mack, J, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2013-09-16 公開日 2013-10-09 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 Crystal structure of ComJ, inhibitor of the DNA degrading activity of NucA, from Bacillus subtilis To be Published
6N3K	Crystal structure of an epoxide hydrolase from Trichoderma reesei in complex with inhibitor 1 分子名称: Epoxide hydrolase, N-{cis-4-[(2,6-difluorophenyl)methoxy]cyclohexyl}-N'-(3-phenylpropyl)urea 著者 de Oliveira, G.S, Adriani, P.P, Ribeiro, J.A, Morisseau, C, Hammock, B.D, Dias, M.V, Chambergo, F.S. 登録日 2018-11-15 公開日 2019-11-20 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 The molecular structure of an epoxide hydrolase from Trichoderma reesei in complex with urea or amide-based inhibitors. Int. J. Biol. Macromol., 129, 2019
6N5D	Broadly protective antibodies directed to a subdominant influenza hemagglutinin epitope 分子名称: Hemagglutinin, antibody heavy chain, antibody light chain 著者 Bajic, G, Schmidt, A.G. 登録日 2018-11-21 公開日 2019-06-05 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Influenza Antigen Engineering Focuses Immune Responses to a Subdominant but Broadly Protective Viral Epitope. Cell Host Microbe, 25, 2019
6N5S	Structure of Human pir-miRNA-320b-2 Apical Loop and One-base-pair Stem Fused to the YdaO Riboswitch Scaffold 分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, GUANOSINE-5'-MONOPHOSPHATE, MAGNESIUM ION, ... 著者 Shoffner, G.M, Peng, Z, Guo, F. 登録日 2018-11-22 公開日 2019-11-27 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.802 Å) 主引用文献 Three-dimensional structures of pri-miRNA apical junctions and loops revealed by scaffold-directed crystallography To Be Published
4MT4	Crystal structure of the Campylobacter jejuni CmeC outer membrane channel 分子名称: (2S)-1-(pentanoyloxy)propan-2-yl hexanoate, (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, CmeC, ... 著者 Su, C.-C, Yu, E.W. 登録日 2013-09-19 公開日 2014-09-24 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (2.373 Å) 主引用文献 Crystal structure of the Campylobacter jejuni CmeC outer membrane channel. Protein Sci., 23, 2014
6N1I	Cryo-EM structure of NLRC4-CARD filament 分子名称: NLR family CARD domain-containing protein 4 著者 Li, Y, Fu, T, Wu, H. 登録日 2018-11-08 公開日 2018-12-05 最終更新日 2025-05-28 実験手法 ELECTRON MICROSCOPY (3.58 Å) 主引用文献 Cryo-EM structures of ASC and NLRC4 CARD filaments reveal a unified mechanism of nucleation and activation of caspase-1. Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6N1Z	Importin-9 bound to H2A-H2B 分子名称: Histone H2A, Histone H2B 1.1, Importin-9 著者 Tomchick, D.R, Chook, Y.M, Padavannil, A. 登録日 2018-11-12 公開日 2019-03-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Importin-9 wraps around the H2A-H2B core to act as nuclear importer and histone chaperone. Elife, 8, 2019

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