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6W9R
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Crystal structure of an OTU deubiquitinase from Wolbachia pipientis wMel bound to ubiquitin
分子名称: CITRATE ANION, OTU domain-containing protein wMelOTU, Ubiquitin
著者Schubert, A.F, Pruneda, J.N, Komander, D.
登録日2020-03-23
公開日2020-07-01
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Identification and characterization of diverse OTU deubiquitinases in bacteria.
Embo J., 39, 2020
8WIB
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BU of 8wib by Molmil
Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Kumar, N, Sharma, S, Kaushal, P.S.
登録日2023-09-24
公開日2024-02-28
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo- EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH.
Nat Commun, 15, 2024
7DDE
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BU of 7dde by Molmil
Cryo-EM structure of the Ape4 and Nbr1 complex
分子名称: Aspartyl aminopeptidase 1,ZZ-type zinc finger-containing protein P35G2.11c,Maltose/maltodextrin-binding periplasmic protein, ZINC ION
著者Zhang, J, Ye, K.
登録日2020-10-28
公開日2021-07-14
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.26 Å)
主引用文献Molecular and structural mechanisms of ZZ domain-mediated cargo selection by Nbr1.
Embo J., 40, 2021
5L5E
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BU of 5l5e by Molmil
Yeast 20S proteasome with human beta5i (1-138) and human beta6 (97-111; 118-133) in complex with carfilzomib
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
著者Groll, M, Huber, E.M.
登録日2016-05-28
公開日2016-11-09
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
6VWM
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BU of 6vwm by Molmil
70S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Loerch, S, Bao, C, Ling, C, Korostelev, A.A, Grigorieff, N, Ermolenko, D.M.
登録日2020-02-20
公開日2020-06-03
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献mRNA stem-loops can pause the ribosome by hindering A-site tRNA binding.
Elife, 9, 2020
5L5Y
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BU of 5l5y by Molmil
Yeast 20S proteasome with human beta5c (1-138) and human beta6 (97-111; 118-133) in complex with carfilzomib
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
著者Groll, M, Huber, E.M.
登録日2016-05-28
公開日2016-11-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献A humanized yeast proteasome identifies unique binding modes of inhibitors for the immunosubunit beta 5i.
EMBO J., 35, 2016
6VZ2
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BU of 6vz2 by Molmil
Escherichia coli transcription-translation complex D1 (TTC-D1) containing mRNA with a 27 nt long spacer, NusG, and fMet-tRNAs at E-site and P-site
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-02-27
公開日2020-09-02
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (10 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
8WI7
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BU of 8wi7 by Molmil
Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
著者Kumar, N, Sharma, S, Kaushal, P.S.
登録日2023-09-24
公開日2024-02-28
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Cryo- EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH.
Nat Commun, 15, 2024
5L6V
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BU of 5l6v by Molmil
Crystal structure of E. coli ADP-glucose pyrophosphorylase (AGPase) in complex with a negative allosteric regulator adenosine monophosphate (AMP) - AGPase*AMP
分子名称: ADENOSINE MONOPHOSPHATE, Glucose-1-phosphate adenylyltransferase, PHOSPHATE ION, ...
著者Cifuente, J.O, Albesa-Jove, D, Comino, N, Madariaga-Marcos, J, Agirre, J, Lopez-Fernandez, S, Garcia-Alija, M, Guerin, M.E.
登録日2016-05-31
公開日2016-09-07
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.667 Å)
主引用文献Structural Basis of Glycogen Biosynthesis Regulation in Bacteria.
Structure, 24, 2016
8WGV
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BU of 8wgv by Molmil
BA.2(S375) Spike (S6P)/hACE2 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, ...
著者Wei, X, Zhang, Z.
登録日2023-09-22
公開日2024-02-28
最終更新日2024-04-24
実験手法ELECTRON MICROSCOPY (2.92 Å)
主引用文献The receptor binding domain of SARS-CoV-2 Omicron subvariants targets Siglec-9 to decrease its immunogenicity by preventing macrophage phagocytosis.
Nat.Immunol., 25, 2024
6XKK
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BU of 6xkk by Molmil
Cryo-EM structure of the NLRP1-CARD filament
分子名称: NACHT, LRR and PYD domains-containing protein 1
著者Hollingsworth, L.R, David, L, Li, Y, Sharif, H, Fontana, P, Fu, T, Wu, H.
登録日2020-06-26
公開日2020-11-25
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.72 Å)
主引用文献Mechanism of filament formation in UPA-promoted CARD8 and NLRP1 inflammasomes.
Nat Commun, 12, 2021
6W1V
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BU of 6w1v by Molmil
RT XFEL structure of the two-flash state of Photosystem II (2F, S3-rich) at 2.09 Angstrom resolution
分子名称: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
著者Ibrahim, M, Fransson, T, Chatterjee, R, Cheah, M.H, Hussein, R, Lassalle, L, Sutherlin, K.D, Young, I.D, Fuller, F.D, Gul, S, Kim, I.-S, Simon, P.S, de Lichtenberg, C, Chernev, P, Bogacz, I, Pham, C, Orville, A.M, Saichek, N, Northen, T.R, Batyuk, A, Carbajo, S, Alonso-Mori, R, Tono, K, Owada, S, Bhowmick, A, Bolotovski, R, Mendez, D, Moriarty, N.W, Holton, J.M, Dobbek, H, Brewster, A.S, Adams, P.D, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yachandra, V.K, Yano, J.
登録日2020-03-04
公開日2020-06-03
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献Untangling the sequence of events during the S2→ S3transition in photosystem II and implications for the water oxidation mechanism.
Proc.Natl.Acad.Sci.USA, 117, 2020
6XU6
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BU of 6xu6 by Molmil
Drosophila melanogaster Testis 80S ribosome
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ...
著者Hopes, T, Agapiou, M, Norris, K, McCarthy, C.G.P, OConnell, M.J, Fontana, J, Aspden, J.L.
登録日2020-01-17
公開日2021-07-28
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching.
Nucleic Acids Res., 50, 2022
6XU8
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BU of 6xu8 by Molmil
Drosophila melanogaster Ovary 80S ribosome
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ...
著者Hopes, T, Agapiou, M, Norris, K, McCarthy, C.G.P, OConnell, M.J, Fontana, J, Aspden, J.L.
登録日2020-01-17
公開日2021-07-28
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching.
Nucleic Acids Res., 50, 2022
8WLO
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BU of 8wlo by Molmil
Cryo-EM structure of SARS-CoV-2 prototype spike protein in complex with hippopotamus ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme, ...
著者Han, P, Yang, R.R, Li, S.H.
登録日2023-09-30
公開日2024-03-27
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (2.62 Å)
主引用文献Molecular basis of hippopotamus ACE2 binding to SARS-CoV-2.
J.Virol., 98, 2024
5L9E
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BU of 5l9e by Molmil
CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH A QUINOLINE OLIGOAMIDE FOLDAMER
分子名称: Aromatic foldamer, Carbonic anhydrase 2, GLYCEROL, ...
著者Vallade, M, Langlois d'Estaintot, B, Granier, T, Huc, I.
登録日2016-06-10
公開日2017-06-21
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献CRYSTAL STRUCTURE OF HUMAN CARBONIC ANHYDRASE II IN COMPLEX WITH A QUINOLINE OLIGOAMIDE FOLDAMER
To Be Published
8AI2
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BU of 8ai2 by Molmil
Crystal structure of radical SAM epimerase EpeE from Bacillus subtilis with [4Fe-4S] clusters, S-adenosyl-L-homocysteine and RiPP peptide 5 bound
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, IRON/SULFUR CLUSTER, ...
著者Polsinelli, I, Fyfe, C.D, Legrand, P, Kubiak, X, Chavas, L.M.G, Berteau, O, Benjdia, A.
登録日2022-07-25
公開日2024-01-10
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.393 Å)
主引用文献Structural and mechanistic basis for RiPP epimerization by a radical SAM enzyme.
Nat.Chem.Biol., 20, 2024
8WUC
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BU of 8wuc by Molmil
Cryo-EM structure of H. thermoluteolus GroEL-GroES2 football complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Chaperonin GroEL, Co-chaperonin GroES, ...
著者Liao, Z, Gopalasingam, C.C, Kameya, M, Gerle, C, Shigematsu, H, Ishii, M, Arakawa, T, Fushinobu, S.
登録日2023-10-20
公開日2024-03-27
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Structural insights into thermophilic chaperonin complexes.
Structure, 32, 2024
8WQ4
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BU of 8wq4 by Molmil
Structural basis of translation inhibition by a valine tRNA-derived fragment
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Wang, Y.H, Zhou, J.
登録日2023-10-11
公開日2024-04-10
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.53 Å)
主引用文献Structural basis of translation inhibition by a valine tRNA-derived fragment.
Life Sci Alliance, 7, 2024
6XU7
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BU of 6xu7 by Molmil
Drosophila melanogaster Testis polysome ribosome
分子名称: 18S ribosomal RNA, 28S ribosomal RNA, 2S ribosomal RNA, ...
著者Hopes, T, Agapiou, M, Norris, K, McCarthy, C.G.P, OConnell, M.J, Fontana, J, Aspden, J.L.
登録日2020-01-17
公開日2021-07-28
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Ribosome heterogeneity in Drosophila melanogaster gonads through paralog-switching.
Nucleic Acids Res., 50, 2022
6VYU
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BU of 6vyu by Molmil
Escherichia coli transcription-translation complex C2 (TTC-C2) containing a 27 nt long mRNA spacer
分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S1, ...
著者Molodtsov, V, Wang, C, Su, M, Ebright, R.H.
登録日2020-02-27
公開日2020-09-02
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (7 Å)
主引用文献Structural basis of transcription-translation coupling.
Science, 369, 2020
8WUW
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BU of 8wuw by Molmil
Cryo-EM structure of H. thermophilus GroEL-GroES2 asymmetric football complex
分子名称: Chaperonin GroEL, Co-chaperonin GroES, MAGNESIUM ION, ...
著者Liao, Z, Gopalasingam, C.C, Kameya, M, Gerle, C, Shigematsu, H, Ishii, M, Arakawa, T, Fushinobu, S.
登録日2023-10-21
公開日2024-03-27
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural insights into thermophilic chaperonin complexes.
Structure, 32, 2024
8WKP
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BU of 8wkp by Molmil
Structural basis of translation inhibition by a valine tRNA-derived fragment
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Wang, Y.H, Zhou, J.
登録日2023-09-28
公開日2024-04-10
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (4.62 Å)
主引用文献Structural basis of translation inhibition by a valine tRNA-derived fragment.
Life Sci Alliance, 7, 2024
6X96
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BU of 6x96 by Molmil
Cryo-EM model of HIV-1 Env BG505 SOSIP.664 in complex with rabbit monoclonal antibody 10A fragment antigen binding variable domain
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 HIV-1 Env gp120, ...
著者Ozorowski, G, Cottrell, C.A, Ward, A.B.
登録日2020-06-02
公開日2021-12-08
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Limited breadth of anti-HIV Env glycan hole antibodies is further hindered by strain-specific peptide interactions
To Be Published
8AKZ
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BU of 8akz by Molmil
320 A SynPspA rod after incubation with ATP
分子名称: Chloroplast membrane-associated 30 kD protein
著者Junglas, B, Hudina, E, Schoennenbeck, P, Ritter, I, Santiago-Schuebel, B, Huesgen, P, Sachse, C.
登録日2022-07-31
公開日2024-02-14
最終更新日2024-09-04
実験手法ELECTRON MICROSCOPY (6.9 Å)
主引用文献Structural plasticity of bacterial ESCRT-III protein PspA in higher-order assemblies.
Nat.Struct.Mol.Biol., 2024

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件を2024-11-06に公開中

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