Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4ORH
DownloadVisualize
BU of 4orh by Molmil
Crystal structure of RNF8 bound to the UBC13/MMS2 heterodimer
分子名称: E3 ubiquitin-protein ligase RNF8, Ubiquitin-conjugating enzyme E2 N, Ubiquitin-conjugating enzyme E2 variant 2, ...
著者Campbell, S.J, Edwards, R.A, Glover, J.N.M.
登録日2014-02-11
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (4.802 Å)
主引用文献Molecular insights into the function of RING finger (RNF)-containing proteins hRNF8 and hRNF168 in Ubc13/Mms2-dependent ubiquitylation.
J.Biol.Chem., 287, 2012
7KZR
DownloadVisualize
BU of 7kzr by Molmil
Structure of the human Fanconi Anaemia Core-UBE2T-ID complex
分子名称: E3 ubiquitin-protein ligase FANCL, Fanconi anemia core complex-associated protein 100, Fanconi anemia core complex-associated protein 20, ...
著者Wang, S.L, Pavletich, N.P.
登録日2020-12-10
公開日2021-03-10
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structure of the FA core ubiquitin ligase closing the ID clamp on DNA.
Nat.Struct.Mol.Biol., 28, 2021
7KZV
DownloadVisualize
BU of 7kzv by Molmil
Structure of the human fanconi anaemia Core-UBE2T-ID-DNA complex in closed state
分子名称: DNA (29-MER), E3 ubiquitin-protein ligase FANCL, Fanconi anemia core complex-associated protein 100, ...
著者Wang, S.L, Pavletich, N.P.
登録日2020-12-10
公開日2021-03-10
最終更新日2021-03-24
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of the FA core ubiquitin ligase closing the ID clamp on DNA.
Nat.Struct.Mol.Biol., 28, 2021
7KZT
DownloadVisualize
BU of 7kzt by Molmil
Structure of the human fanconi anaemia Core-UBE2T-ID-DNA complex in intermediate state
分子名称: DNA (22-MER), E3 ubiquitin-protein ligase FANCL, Fanconi anemia core complex-associated protein 100, ...
著者Wang, S.L, Pavletich, N.P.
登録日2020-12-10
公開日2021-03-10
最終更新日2021-03-24
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of the FA core ubiquitin ligase closing the ID clamp on DNA.
Nat.Struct.Mol.Biol., 28, 2021
7KZS
DownloadVisualize
BU of 7kzs by Molmil
Structure of the human fanconi anaemia Core-UBE2T-ID-DNA complex in open state
分子名称: DNA (25-MER), E3 ubiquitin-protein ligase FANCL, Fanconi anemia core complex-associated protein 100, ...
著者Wang, S.L, Pavletich, N.P.
登録日2020-12-10
公開日2021-03-10
最終更新日2021-03-24
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structure of the FA core ubiquitin ligase closing the ID clamp on DNA.
Nat.Struct.Mol.Biol., 28, 2021
2Y9M
DownloadVisualize
BU of 2y9m by Molmil
Pex4p-Pex22p structure
分子名称: 1,2-ETHANEDIOL, PEROXISOME ASSEMBLY PROTEIN 22, UBIQUITIN-CONJUGATING ENZYME E2-21 KDA
著者Williams, C, van den Berg, M, Panjikar, S, Distel, B, Wilmanns, M.
登録日2011-02-15
公開日2011-10-26
最終更新日2017-12-13
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Insights Into Ubiquitin-Conjugating Enzyme/ Co-Activator Interactions from the Structure of the Pex4P:Pex22P Complex.
Embo J., 31, 2011
2Y9P
DownloadVisualize
BU of 2y9p by Molmil
Pex4p-Pex22p mutant II structure
分子名称: PEROXISOME ASSEMBLY PROTEIN 22, UBIQUITIN-CONJUGATING ENZYME E2-21 KDA
著者Williams, C, van den Berg, M, Panjikar, S, Distel, B, Wilmanns, M.
登録日2011-02-16
公開日2012-02-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Pex4P-Pex22P Structure
To be Published
2LXP
DownloadVisualize
BU of 2lxp by Molmil
NMR structure of two domains in ubiquitin ligase gp78, RING and G2BR, bound to its conjugating enzyme Ube2g
分子名称: E3 ubiquitin-protein ligase AMFR, Ubiquitin-conjugating enzyme E2 G2, ZINC ION
著者Das, R, Linag, Y, Mariano, J, Li, J, Huang, T, King, A, Weissman, A, Ji, X, Byrd, R.
登録日2012-08-30
公開日2013-08-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Allosteric regulation of E2:E3 interactions promote a processive ubiquitination machine.
Embo J., 32, 2013
3A4S
DownloadVisualize
BU of 3a4s by Molmil
The crystal structure of the SLD2:Ubc9 complex
分子名称: NFATC2-interacting protein, SUMO-conjugating enzyme UBC9
著者Sekiyama, N, Arita, K, Ikeda, Y, Ariyoshi, M, Tochio, H, Saitoh, H, Shirakawa, M.
登録日2009-07-14
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural basis for regulation of poly-SUMO chain by a SUMO-like domain of Nip45
Proteins, 78, 2009
3A33
DownloadVisualize
BU of 3a33 by Molmil
UbcH5b~Ubiquitin Conjugate
分子名称: GLYCEROL, Ubiquitin, Ubiquitin-conjugating enzyme E2 D2
著者Sakata, E, Satoh, T, Yamamoto, S, Yamaguchi, Y, Yagi-Utsumi, M, Kurimoto, E, Wakatsuki, S, Kato, K.
登録日2009-06-08
公開日2009-11-24
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal Structure of UbcH5b~Ubiquitin Intermediate: Insight into the Formation of the Self-Assembled E2~Ub Conjugates
Structure, 18, 2010
2YHO
DownloadVisualize
BU of 2yho by Molmil
The IDOL-UBE2D complex mediates sterol-dependent degradation of the LDL receptor
分子名称: ACETATE ION, E3 UBIQUITIN-PROTEIN LIGASE MYLIP, UBIQUITIN-CONJUGATING ENZYME E2 D1, ...
著者Fairall, L, Goult, B.T, Millard, C.J, Tontonoz, P, Schwabe, J.W.R.
登録日2011-05-04
公開日2011-06-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The Idol-Ube2D Complex Mediates Sterol-Dependent Degradation of the Ldl Receptor.
Genes Dev., 25, 2011
2XWU
DownloadVisualize
BU of 2xwu by Molmil
CRYSTAL STRUCTURE OF IMPORTIN 13 - UBC9 COMPLEX
分子名称: IMPORTIN13, SUMO-CONJUGATING ENZYME UBC9
著者Gruenwald, M, Bono, F.
登録日2010-11-05
公開日2010-12-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure of Importin13-Ubc9 Complex: Nuclear Import and Release of a Key Regulator of Sumoylation.
Embo J., 30, 2011
2NVU
DownloadVisualize
BU of 2nvu by Molmil
Structure of APPBP1-UBA3~NEDD8-NEDD8-MgATP-Ubc12(C111A), a trapped ubiquitin-like protein activation complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Maltose binding protein/NEDD8-activating enzyme E1 catalytic subunit chimera, ...
著者Huang, D.T, Hunt, H.W, Zhuang, M, Ohi, M.D, Holton, J.M, Schulman, B.A.
登録日2006-11-13
公開日2007-01-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Basis for a ubiquitin-like protein thioester switch toggling E1-E2 affinity.
Nature, 445, 2007
7MYF
DownloadVisualize
BU of 7myf by Molmil
Ubiquitin variant UbV.k.1 in complex with Ube2k
分子名称: Ubiquitin, Ubiquitin variant UbV.k.1, Ubiquitin-conjugating enzyme E2 K
著者Middleton, A.J, Day, C.L, Teyra, J, Sidhu, S.S.
登録日2021-05-21
公開日2021-08-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Identification of Ubiquitin Variants That Inhibit the E2 Ubiquitin Conjugating Enzyme, Ube2k.
Acs Chem.Biol., 16, 2021
7MYH
DownloadVisualize
BU of 7myh by Molmil
Ubiquitin variant UbV.k.2 in complex with Ube2k
分子名称: GLYCEROL, Ubiquitin variant UbV.k.2, Ubiquitin-conjugating enzyme E2 K
著者Middleton, A.J, Day, C.L, Teyra, J, Sidhu, S.S.
登録日2021-05-21
公開日2021-08-25
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.394 Å)
主引用文献Identification of Ubiquitin Variants That Inhibit the E2 Ubiquitin Conjugating Enzyme, Ube2k.
Acs Chem.Biol., 16, 2021
7M2K
DownloadVisualize
BU of 7m2k by Molmil
CDC34A-Ubiquitin-2ab inhibitor complex
分子名称: 4-[(3',5'-dichloro[1,1'-biphenyl]-4-yl)methyl]-N-ethyl-1-(methoxyacetyl)piperidine-4-carboxamide, Ubiquitin, Ubiquitin-conjugating enzyme E2 R1
著者Ceccarelli, D.F, St-Cyr, D, Tyers, M, Sicheri, F.
登録日2021-03-16
公開日2021-11-03
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Identification and optimization of molecular glue compounds that inhibit a noncovalent E2 enzyme-ubiquitin complex.
Sci Adv, 7, 2021
2O25
DownloadVisualize
BU of 2o25 by Molmil
Ubiquitin-Conjugating Enzyme E2-25 kDa Complexed With SUMO-1-Conjugating Enzyme UBC9
分子名称: SUMO-1-conjugating enzyme UBC9, Ubiquitin-conjugating enzyme E2-25 kDa
著者Walker, J.R, Avvakumov, G.V, Xue, S, Newman, E.M, Mackenzie, F, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2006-11-29
公開日2007-01-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献A Novel and Unexpected Complex Between the SUMO-1-Conjugating Enzyme UBC9 and the Ubiquitin-Conjugating Enzyme E2-25 kDa
To be Published
7MEY
DownloadVisualize
BU of 7mey by Molmil
Structure of yeast Ubr1 in complex with Ubc2 and monoubiquitinated N-degron
分子名称: 2-(ethylamino)ethane-1-thiol, E3 ubiquitin-protein ligase UBR1, Monoubiquitinated N-degron, ...
著者Pan, M, Zheng, Q, Wang, T, Liang, L, Yu, Y, Liu, L, Zhao, M.
登録日2021-04-08
公開日2021-11-24
最終更新日2021-12-22
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献Structural insights into Ubr1-mediated N-degron polyubiquitination.
Nature, 600, 2021
7MEX
DownloadVisualize
BU of 7mex by Molmil
Structure of yeast Ubr1 in complex with Ubc2 and N-degron
分子名称: E3 ubiquitin-protein ligase UBR1, N-degron, Ubiquitin, ...
著者Pan, M, Zheng, Q, Wang, T, Liang, L, Yu, Y, Liu, L, Zhao, M.
登録日2021-04-08
公開日2021-11-24
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.35 Å)
主引用文献Structural insights into Ubr1-mediated N-degron polyubiquitination.
Nature, 600, 2021
2PE6
DownloadVisualize
BU of 2pe6 by Molmil
Non-covalent complex between human SUMO-1 and human Ubc9
分子名称: SUMO-conjugating enzyme UBC9, Small ubiquitin-related modifier 1
著者Capili, A.D, Lima, C.D.
登録日2007-04-02
公開日2007-04-17
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and Analysis of a Complex between SUMO and Ubc9 Illustrates Features of a Conserved E2-Ubl Interaction.
J.Mol.Biol., 369, 2007
2PX9
DownloadVisualize
BU of 2px9 by Molmil
The intrinsic affinity between E2 and the Cys domain of E1 in Ubiquitin-like modifications
分子名称: SUMO-activating enzyme subunit 2, SUMO-conjugating enzyme UBC9
著者Wang, J.H, Hu, W.D, Cai, S, Lee, B, Song, J, Chen, Y.
登録日2007-05-14
公開日2007-07-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献The intrinsic affinity between E2 and the Cys domain of E1 in ubiquitin-like modifications.
Mol.Cell, 27, 2007
2OXQ
DownloadVisualize
BU of 2oxq by Molmil
Structure of the UbcH5 :CHIP U-box complex
分子名称: CHLORIDE ION, STIP1 homology and U-Box containing protein 1, Ubiquitin-conjugating enzyme E2D 1
著者Xu, Z, Nix, J.C, Devlin, K.I, Misra, S.
登録日2007-02-20
公開日2008-02-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Interactions between the quality control ubiquitin ligase CHIP and ubiquitin conjugating enzymes.
Bmc Struct.Biol., 8, 2008
2PWQ
DownloadVisualize
BU of 2pwq by Molmil
Crystal structure of a putative ubiquitin conjugating enzyme from Plasmodium yoelii
分子名称: Ubiquitin conjugating enzyme
著者Qiu, W, Dong, A, Hassanali, A, Lin, L, Brokx, S, Altamentova, S, Hills, T, Lew, J, Ravichandran, M, Kozieradzki, I, Zhao, Y, Schapira, M, Edwards, A.M, Arrowsmith, C.H, Weigelt, J, Sundstrom, M, Bochkarev, A, Hui, R, Structural Genomics Consortium (SGC)
登録日2007-05-11
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of a putative ubiquitin conjugating enzyme from Plasmodium yoelii.
To be Published
7ZJ3
DownloadVisualize
BU of 7zj3 by Molmil
Structure of TRIM2 RING domain in complex with UBE2D1~Ub conjugate
分子名称: Polyubiquitin-C, Tripartite motif-containing protein 2, Ubiquitin-conjugating enzyme E2 D1, ...
著者Esposito, D, Garza-Garcia, A, Dudley-Fraser, J, Rittinger, K.
登録日2022-04-08
公開日2022-11-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.53 Å)
主引用文献Divergent self-association properties of paralogous proteins TRIM2 and TRIM3 regulate their E3 ligase activity.
Nat Commun, 13, 2022
2FUH
DownloadVisualize
BU of 2fuh by Molmil
Solution Structure of the UbcH5c/Ub Non-covalent Complex
分子名称: Ubiquitin, Ubiquitin-conjugating enzyme E2 D3
著者Brzovic, P.S, Lissounov, A, Hoyt, D.W, Klevit, R.E.
登録日2006-01-26
公開日2006-03-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A UbcH5/Ubiquitin Noncovalent Complex Is Required for Processive BRCA1-Directed Ubiquitination.
Mol.Cell, 21, 2006

225158

件を2024-09-18に公開中

PDB statisticsPDBj update infoContact PDBjnumon