Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2J25
DownloadVisualize
BU of 2j25 by Molmil
Partially deglycosylated glucoceramidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLUCOSYLCERAMIDASE, ...
著者Brumshtein, B, Wormald, M.R, Silman, I, Futerman, A.H, Sussman, J.L.
登録日2006-08-16
公開日2006-12-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural Comparison of Differently Glycosylated Forms of Acid-Beta-Glucosidase, the Defective Enzyme in Gaucher Disease
Acta Crystallogr.,Sect.D, 62, 2006
6AJC
DownloadVisualize
BU of 6ajc by Molmil
Crystal structure of Trypanosoma cruzi cytosolic isocitrate dehydrogenase in complex with NADP+, isocitrate and ca2+
分子名称: CALCIUM ION, ISOCITRIC ACID, Isocitrate dehydrogenase [NADP], ...
著者Wang, X, Inaoka, D.K, Shiba, T, Balogun, E.O, Ziebart, N, Allman, S, Watanabe, Y, Nozaki, T, Boshart, M, Bringaud, F, Harada, S, Kita, K.
登録日2018-08-27
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Biochemical characterization of a novel Trypanosoma brucei glycosomal isocitrate dehydrogenase with dual coenzyme specificity (NADP+/NAD+)
To Be Published
5XPF
DownloadVisualize
BU of 5xpf by Molmil
High-resolution X-ray structure of the T26H mutant of T4 lysozyme
分子名称: CHLORIDE ION, Endolysin, GLYCEROL, ...
著者Hiromoto, T, Kuroki, R.
登録日2017-06-01
公開日2017-10-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.04 Å)
主引用文献Neutron structure of the T26H mutant of T4 phage lysozyme provides insight into the catalytic activity of the mutant enzyme and how it differs from that of wild type.
Protein Sci., 26, 2017
4PEL
DownloadVisualize
BU of 4pel by Molmil
S1C mutant of Penicillin G acylase from Kluyvera citrophila
分子名称: CALCIUM ION, Penicillin G acylase subunit alpha, Penicillin G acylase subunit beta
著者Ramasamy, S, Chand, D, Varshney, N.K, Brannigan, J.A, Wilkinson, A.J, Suresh, C.G.
登録日2014-04-24
公開日2015-07-22
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Penicillin G acylase
To Be Published
6EC6
DownloadVisualize
BU of 6ec6 by Molmil
Ruminococcus gnavus Beta-glucuronidase
分子名称: Beta-glucuronidase, CHLORIDE ION, GLYCEROL
著者Biernat, K.A, Redinbo, M.R.
登録日2018-08-07
公開日2019-02-13
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Structure, function, and inhibition of drug reactivating human gut microbial beta-glucuronidases.
Sci Rep, 9, 2019
6AJA
DownloadVisualize
BU of 6aja by Molmil
Crystal structure of Trypanosoma brucei glycosomal isocitrate dehydrogenase in complex with NADPH, alpha-ketoglutarate and ca2+
分子名称: 2-OXOGLUTARIC ACID, CALCIUM ION, GLYCEROL, ...
著者Wang, X, Inaoka, D.K, Shiba, T, Balogun, E.O, Ziebart, N, Allman, S, Watanabe, Y, Nozaki, T, Boshart, M, Bringaud, F, Harada, S, Kita, K.
登録日2018-08-27
公開日2019-08-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献Biochemical characterization of a novel Trypanosoma brucei glycosomal isocitrate dehydrogenase with dual coenzyme specificity (NADP+/NAD+)
To Be Published
7V6X
DownloadVisualize
BU of 7v6x by Molmil
Crystal structure of HPPD complexed with Y18556
分子名称: 4-hydroxyphenylpyruvate dioxygenase, 5-methyl-3-[(2-methylphenyl)methyl]-6-[(1~{R},2~{S})-2-oxidanyl-6-oxidanylidene-cyclohexyl]carbonyl-1,2,3-benzotriazin-4-one, COBALT (II) ION
著者Lin, H.Y, Yang, G.F.
登録日2021-08-20
公開日2022-08-24
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Pharmacophore-Oriented Discovery of Novel 1,2,3-Benzotriazine-4-one Derivatives as Potent 4-Hydroxyphenylpyruvate Dioxygenase Inhibitors.
J.Agric.Food Chem., 70, 2022
2R8F
DownloadVisualize
BU of 2r8f by Molmil
Crystal structure of H225A NSP2 and ATP-gS complex
分子名称: Non-structural RNA-binding protein 35, PHOSPHATE ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
著者Kumar, M, Prasad, B.V.V.
登録日2007-09-10
公開日2007-10-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystallographic and Biochemical Analysis of Rotavirus NSP2 with Nucleotides Reveals a Nucleoside Diphosphate Kinase-Like Activity
J.Virol., 81, 2007
6AK1
DownloadVisualize
BU of 6ak1 by Molmil
Crystal structure of DmoA from Hyphomicrobium sulfonivorans
分子名称: Dimethyl-sulfide monooxygenase
著者Cao, H.Y, Wang, P, Peng, M, Li, C.Y.
登録日2018-08-28
公開日2018-12-12
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.284 Å)
主引用文献Crystal structure of the dimethylsulfide monooxygenase DmoA from Hyphomicrobium sulfonivorans.
Acta Crystallogr.,Sect.F, 74, 2018
5ZRV
DownloadVisualize
BU of 5zrv by Molmil
Structure of human mitochondrial trifunctional protein, octamer
分子名称: Trifunctional enzyme subunit alpha, mitochondrial, Trifunctional enzyme subunit beta
著者Liang, K, Li, N, Dai, J, Wang, X, Liu, P, Chen, X, Wang, C, Gao, N, Xiao, J.
登録日2018-04-25
公開日2018-06-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7.7 Å)
主引用文献Cryo-EM structure of human mitochondrial trifunctional protein
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5XTD
DownloadVisualize
BU of 5xtd by Molmil
Cryo-EM structure of human respiratory complex I
分子名称: (9R,11S)-9-({[(1S)-1-HYDROXYHEXADECYL]OXY}METHYL)-2,2-DIMETHYL-5,7,10-TRIOXA-2LAMBDA~5~-AZA-6LAMBDA~5~-PHOSPHAOCTACOSANE-6,6,11-TRIOL, 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, Acyl carrier protein, ...
著者Gu, J, Wu, M, Yang, M.
登録日2017-06-19
公開日2017-08-30
最終更新日2019-11-20
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Architecture of Human Mitochondrial Respiratory Megacomplex I2III2IV2.
Cell, 170, 2017
5XVX
DownloadVisualize
BU of 5xvx by Molmil
Crystal Structure of Aspergillus niger Glutamate Dehydrogenase Complexed With Alpha-ketoglutarate and NADPH
分子名称: 2-OXOGLUTARIC ACID, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Prakash, P, Punekar, N.S, Bhaumik, P.
登録日2017-06-28
公開日2018-03-21
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural basis for the catalytic mechanism and alpha-ketoglutarate cooperativity of glutamate dehydrogenase.
J. Biol. Chem., 293, 2018
3EJP
DownloadVisualize
BU of 3ejp by Molmil
Golgi alpha-Mannosidase II in complex with 5-substituted swainsonine analog: (5R)-5-[2'-oxo-2'-(phenyl)ethyl]-swainsonine
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, 1-phenyl-2-[(1S,2R,5R,8R,8aR)-1,2,8-trihydroxyoctahydroindolizin-5-yl]ethanone, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kuntz, D.A, Rose, D.R.
登録日2008-09-18
公開日2009-10-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Structural Investigation of the Binding of 5-Substituted Swainsonine Analogues to Golgi alpha-Mannosidase II.
Chembiochem, 11, 2010
4PIY
DownloadVisualize
BU of 4piy by Molmil
Homocysteine bound Cysteine Dioxygenase C93A variant at pH 6.2
分子名称: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, Cysteine dioxygenase type 1, FE (III) ION
著者Driggers, C.M, Karplus, P.A.
登録日2014-05-09
公開日2016-02-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016
3EKD
DownloadVisualize
BU of 3ekd by Molmil
Crystal structure of the A264M heme domain of cytochrome P450 BM3
分子名称: Cytochrome P450(BM-3), PALMITOLEIC ACID, PROTOPORPHYRIN IX CONTAINING FE
著者Toogood, H.S, Leys, D.
登録日2008-09-19
公開日2008-12-30
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Novel haem co-ordination variants of flavocytochrome P450BM3.
Biochem.J., 417, 2009
4PTX
DownloadVisualize
BU of 4ptx by Molmil
Halothermothrix orenii beta-glucosidase A, glucose complex
分子名称: CACODYLATE ION, Glycoside hydrolase family 1, beta-D-glucopyranose
著者Hassan, N, Nguyen, T.H, Kori, L.D, Patel, B.K.C, Haltrich, D, Divne, C, Tan, T.C.
登録日2014-03-11
公開日2014-09-24
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Biochemical and structural characterization of a thermostable beta-glucosidase from Halothermothrix orenii for galacto-oligosaccharide synthesis.
Appl.Microbiol.Biotechnol., 99, 2015
2RCH
DownloadVisualize
BU of 2rch by Molmil
Crystal Structure of Arabidopsis thaliana Allene Oxide Synthase (AOS, cytochrome P450 74A, CYP74A) Complexed with 13(S)-HOD at 1.85 A Resolution
分子名称: (9Z,11E,13S)-13-hydroxyoctadeca-9,11-dienoic acid, Cytochrome P450 74A, GLYCEROL, ...
著者Lee, D.S, Nioche, P, Raman, C.S.
登録日2007-09-20
公開日2008-08-19
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structural insights into the evolutionary paths of oxylipin biosynthetic enzymes.
Nature, 455, 2008
3HGL
DownloadVisualize
BU of 3hgl by Molmil
crystal of AvrPtoB 121-205
分子名称: Effector protein hopAB2
著者Dong, J, Xiao, F, Fan, F, Gu, L, Cang, H, Martin, G.B, Chai, J.
登録日2009-05-14
公開日2009-06-23
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of the Complex between Pseudomonas Effector AvrPtoB and the Tomato Pto Kinase Reveals Both a Shared and a Unique Interface Compared with AvrPto-Pto
Plant Cell, 21, 2009
5XWF
DownloadVisualize
BU of 5xwf by Molmil
Crystal structure of chitinase (RmChi1) from Rhizomucor miehei (SP3221/SAD)
分子名称: Fungal chitinase from Rhizomucor miehei (SeMet-substituted proteins)
著者Jiang, Z.Q, Hu, S.Q, Liu, Y.C, Qin, Z, Yan, Q.J, Yang, S.Q.
登録日2017-06-29
公開日2018-07-04
最終更新日2021-08-18
実験手法X-RAY DIFFRACTION (2.581 Å)
主引用文献Crystal structure of a chitinase (RmChiA) from the thermophilic fungus Rhizomucor miehei with a real active site tunnel.
Biochim Biophys Acta Proteins Proteom, 2021
5XWR
DownloadVisualize
BU of 5xwr by Molmil
Crystal Structure of RBBP4-peptide complex
分子名称: Histone-binding protein RBBP4, MET-SER-ARG-ARG-LYS-GLN-ALA-LYS-PRO-GLN-HIS-ILE
著者Jobichen, C, Lui, B.H, Daniel, G.T, Sivaraman, J.
登録日2017-06-30
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Targeting cancer addiction for SALL4 by shifting its transcriptome with a pharmacologic peptide.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4LZT
DownloadVisualize
BU of 4lzt by Molmil
ATOMIC RESOLUTION REFINEMENT OF TRICLINIC HEW LYSOZYME AT 295K
分子名称: LYSOZYME, NITRATE ION
著者Walsh, M.A, Schneider, T, Sieker, L.C, Dauter, Z, Lamzin, V, Wilson, K.S.
登録日1997-03-31
公開日1998-04-01
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (0.95 Å)
主引用文献Refinement of triclinic hen egg-white lysozyme at atomic resolution.
Acta Crystallogr.,Sect.D, 54, 1998
3E6A
DownloadVisualize
BU of 3e6a by Molmil
Crystal structure and Functional Analysis of Glyceraldehyde-3-phosphate Dehydrogenase from Oryza Sativa
分子名称: Glyceraldehyde-3-phosphate dehydrogenase, cytosolic, SULFATE ION
著者Tien, Y.C, Lin, Y.H, Chang, S.L, Chen, C.J.
登録日2008-08-15
公開日2009-08-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (3.77 Å)
主引用文献Crystal structure and Functional Analysis of Glyceraldehyde-3-phosphate Dehydrogenase from Oryza Sativa
To be Published
4PIX
DownloadVisualize
BU of 4pix by Molmil
Unliganded Cysteine Dioxygenase C93A variant at pH 6.2
分子名称: CHLORIDE ION, Cysteine dioxygenase type 1, FE (III) ION
著者Driggers, C.M, Karplus, P.A.
登録日2014-05-09
公開日2016-02-17
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structure-Based Insights into the Role of the Cys-Tyr Crosslink and Inhibitor Recognition by Mammalian Cysteine Dioxygenase.
J. Mol. Biol., 428, 2016
3EPW
DownloadVisualize
BU of 3epw by Molmil
Crystal structure of Trypanosoma vivax nucleoside hydrolase in complex with the inhibitor (2R,3R,4S)-1-[(4-hydroxy-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-2-(hydroxymethyl)pyrrolidin-3,4-diol
分子名称: 7-(((2R,3R,4S)-3,4-dihydroxy-2-(hydroxymethyl)pyrrolidin-1-yl)methyl)-3H-pyrrolo[3,2-d]pyrimidin-4(5H)-one, CALCIUM ION, IAG-nucleoside hydrolase, ...
著者Versees, W, Goeminne, A, Berg, M, Vandemeulebroucke, A, Haemers, A, Augustyns, K, Steyaert, J.
登録日2008-09-30
公開日2009-03-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Crystal structures of T. vivax nucleoside hydrolase in complex with new potent and specific inhibitors.
Biochim.Biophys.Acta, 1794, 2009
3EQE
DownloadVisualize
BU of 3eqe by Molmil
Crystal structure of the YubC protein from Bacillus subtilis. Northeast Structural Genomics Consortium target SR112.
分子名称: FE (III) ION, Putative cystein dioxygenase
著者Vorobiev, S.M, Su, M, Seetharaman, J, Benach, J, Forouhar, F, Clayton, G, Cooper, B, Wang, H, Foote, E.L, Ciccosanti, C, Mao, L, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
登録日2008-09-30
公開日2008-10-14
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Crystal structure of the YubC protein from Bacillus subtilis.
To be Published

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon