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PDB: 12 results

8HLF
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BU of 8hlf by Molmil
Crystal structure of DddK-DMSOP complex
Descriptor: 3-[dimethyl(oxidanyl)-$l^{4}-sulfanyl]propanoic acid, MANGANESE (II) ION, Novel protein with potential Cupin domain
Authors:Peng, M, Li, C.Y, Zhang, Y.Z.
Deposit date:2022-11-30
Release date:2023-10-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:DMSOP-cleaving enzymes are diverse and widely distributed in marine microorganisms.
Nat Microbiol, 8, 2023
8HLE
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BU of 8hle by Molmil
Structure of DddY-DMSOP complex
Descriptor: 3-[dimethyl(oxidanyl)-$l^{4}-sulfanyl]propanoic acid, DMSP lyase DddY, ZINC ION
Authors:Peng, M, Li, C.Y, Zhang, Y.Z.
Deposit date:2022-11-30
Release date:2023-10-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:DMSOP-cleaving enzymes are diverse and widely distributed in marine microorganisms.
Nat Microbiol, 8, 2023
7VVV
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BU of 7vvv by Molmil
Crystal structure of MmtN
Descriptor: PHOSPHATE ION, SAM-dependent methyltransferase
Authors:Peng, M, Li, C.Y.
Deposit date:2021-11-09
Release date:2022-04-20
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Insights into methionine S-methylation in diverse organisms.
Nat Commun, 13, 2022
2QYK
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BU of 2qyk by Molmil
Crystal structure of PDE4A10 in complex with inhibitor NPV
Descriptor: 4-[8-(3-nitrophenyl)-1,7-naphthyridin-6-yl]benzoic acid, Cyclic AMP-specific phosphodiesterase HSPDE4A10, MAGNESIUM ION, ...
Authors:Wang, H, Peng, M, Chen, Y, Geng, J, Robinson, H, Houslay, M.
Deposit date:2007-08-15
Release date:2008-04-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of the four subfamilies of phosphodiesterase-4 provide insight into the selectivity of their inhibitors.
Biochem.J., 408, 2007
7VVX
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BU of 7vvx by Molmil
MmtN-SAH-Met complex
Descriptor: METHIONINE, PHOSPHATE ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Zhang, Y.Z, Peng, M, Li, C.Y.
Deposit date:2021-11-09
Release date:2022-04-20
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Insights into methionine S-methylation in diverse organisms.
Nat Commun, 13, 2022
7VVW
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BU of 7vvw by Molmil
MmtN-SAM complex
Descriptor: GLYCEROL, PHOSPHATE ION, S-ADENOSYLMETHIONINE, ...
Authors:Zhang, Y.Z, Peng, M, Li, C.Y.
Deposit date:2021-11-09
Release date:2022-04-20
Last modified:2022-08-24
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Insights into methionine S-methylation in diverse organisms.
Nat Commun, 13, 2022
7ESI
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BU of 7esi by Molmil
Crystal structure of the collagenase unit of a Vibrio collagenase from Vibrio harveyi VHJR7 at 1. 8 angstrom resolution.
Descriptor: CALCIUM ION, Collagenase unit (CU), Peptide P1, ...
Authors:Cao, H.Y, Wang, Y, Peng, M, Zhang, Y.Z.
Deposit date:2021-05-11
Release date:2022-02-09
Last modified:2023-02-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of Vibrio collagenase VhaC provides insight into the mechanism of bacterial collagenolysis.
Nat Commun, 13, 2022
4O32
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BU of 4o32 by Molmil
Structure of a malarial protein
Descriptor: CHLORIDE ION, Thioredoxin
Authors:Egea, P.F, Koehl, A, Peng, M, Cascio, D.
Deposit date:2013-12-17
Release date:2014-12-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.196 Å)
Cite:Crystal structure and solution characterization of the thioredoxin-2 from Plasmodium falciparum, a constituent of an essential parasitic protein export complex.
Biochem.Biophys.Res.Commun., 456, 2015
7VLZ
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BU of 7vlz by Molmil
Crystal structure of the collagenase unit of a Vibrio collagenase from Vibrio harveyi VHJR7
Descriptor: CALCIUM ION, Peptide P1, Peptide P2, ...
Authors:Cao, H.Y, Wang, Y, Peng, M, Zhang, Y.Z.
Deposit date:2021-10-05
Release date:2022-10-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structure of the collagenase unit of a Vibrio collagenase from Vibrio harveyi VHJR7
To Be Published
6AK1
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BU of 6ak1 by Molmil
Crystal structure of DmoA from Hyphomicrobium sulfonivorans
Descriptor: Dimethyl-sulfide monooxygenase
Authors:Cao, H.Y, Wang, P, Peng, M, Li, C.Y.
Deposit date:2018-08-28
Release date:2018-12-12
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.284 Å)
Cite:Crystal structure of the dimethylsulfide monooxygenase DmoA from Hyphomicrobium sulfonivorans.
Acta Crystallogr.,Sect.F, 74, 2018
6IHK
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BU of 6ihk by Molmil
Structure of MMPA CoA ligase in complex with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, AMP-binding domain protein
Authors:Shao, X, Cao, H.Y, Wang, P, Li, C.Y, Zhao, F, Peng, M, Chen, X.L, Zhang, Y.Z.
Deposit date:2018-09-30
Release date:2019-07-03
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Mechanistic insight into 3-methylmercaptopropionate metabolism and kinetical regulation of demethylation pathway in marine dimethylsulfoniopropionate-catabolizing bacteria.
Mol.Microbiol., 111, 2019
6IJB
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BU of 6ijb by Molmil
Structure of 3-methylmercaptopropionate CoA ligase mutant K523A in complex with AMP and MMPA
Descriptor: 2-[3-(2-HYDROXY-1,1-DIHYDROXYMETHYL-ETHYLAMINO)-PROPYLAMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 3-(methylsulfanyl)propanoic acid, ADENOSINE MONOPHOSPHATE, ...
Authors:Shao, X, Cao, H.Y, Wang, P, Li, C.Y, Zhao, F, Peng, M, Chen, X.L, Zhang, Y.Z.
Deposit date:2018-10-09
Release date:2019-07-03
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.111 Å)
Cite:Mechanistic insight into 3-methylmercaptopropionate metabolism and kinetical regulation of demethylation pathway in marine dimethylsulfoniopropionate-catabolizing bacteria.
Mol.Microbiol., 111, 2019

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