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PDB: 1507 件

8ITP
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BU of 8itp by Molmil
Crystal structure of USP47 catalytic domain complex with ubiquitin
分子名称: Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 47, ZINC ION
著者Kim, E.E, Shin, S.C.
登録日2023-03-22
公開日2024-03-27
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and functional characterization of USP47 reveals a hot spot for inhibitor design.
Commun Biol, 6, 2023
5W8U
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BU of 5w8u by Molmil
Crystal structure of MERS-CoV papain-like protease in complex with the C-terminal domain of human ISG15
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ORF1ab, Ubiquitin-like protein ISG15, ...
著者Daczkowski, C.M, Goodwin, O.Y, Dzimianski, J.D, Pegan, S.D.
登録日2017-06-22
公開日2017-09-27
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.411 Å)
主引用文献Structurally Guided Removal of DeISGylase Biochemical Activity from Papain-Like Protease Originating from Middle East Respiratory Syndrome Coronavirus.
J. Virol., 91, 2017
2KTF
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BU of 2ktf by Molmil
Solution NMR structure of human polymerase iota UBM2 in complex with ubiquitin
分子名称: DNA polymerase iota, Ubiquitin
著者Cui, G, Benirschke, R, Mer, G.
登録日2010-02-01
公開日2010-11-03
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural Basis of Ubiquitin Recognition by Translesion Synthesis DNA Polymerase iota.
Biochemistry, 49, 2010
2KDF
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BU of 2kdf by Molmil
NMR structure of minor S5a (196-306):K48 linked diubiquitin species
分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
著者Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J.
登録日2009-01-06
公開日2009-09-01
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
2K8B
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BU of 2k8b by Molmil
Solution structure of PLAA family ubiquitin binding domain (PFUC) cis isomer in complex with ubiquitin
分子名称: Phospholipase A-2-activating protein, Ubiquitin
著者Fu, Q.S, Zhou, C.J, Gao, H.C, Lin, D.H, Hu, H.Y.
登録日2008-09-04
公開日2009-05-05
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Basis for Ubiquitin Recognition by a Novel Domain from Human Phospholipase A2-activating Protein.
J.Biol.Chem., 284, 2009
8JAR
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BU of 8jar by Molmil
Structure of CRL2APPBP2 bound with RxxGPAA degron (dimer)
分子名称: Amyloid protein-binding protein 2, Cullin-2, Elongin-B, ...
著者Zhao, S, Zhang, K, Xu, C.
登録日2023-05-07
公開日2023-10-18
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Molecular basis for C-degron recognition by CRL2 APPBP2 ubiquitin ligase.
Proc.Natl.Acad.Sci.USA, 120, 2023
8JAL
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BU of 8jal by Molmil
Structure of CRL2APPBP2 bound with RxxGP degron (dimer)
分子名称: Amyloid protein-binding protein 2, Cullin-2, Elongin-B, ...
著者Zhao, S, Zhang, K, Xu, C.
登録日2023-05-06
公開日2023-10-18
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Molecular basis for C-degron recognition by CRL2 APPBP2 ubiquitin ligase.
Proc.Natl.Acad.Sci.USA, 120, 2023
8JAQ
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BU of 8jaq by Molmil
Structure of CRL2APPBP2 bound with RxxGP degron (tetramer)
分子名称: Amyloid protein-binding protein 2, Cullin-2, E3 ubiquitin-protein ligase RBX1, ...
著者Zhao, S, Zhang, K, Xu, C.
登録日2023-05-06
公開日2023-10-18
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.26 Å)
主引用文献Molecular basis for C-degron recognition by CRL2 APPBP2 ubiquitin ligase.
Proc.Natl.Acad.Sci.USA, 120, 2023
8JAS
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BU of 8jas by Molmil
Structure of CRL2APPBP2 bound with RxxGPAA degron (tetramer)
分子名称: Amyloid protein-binding protein 2, Cullin-2, E3 ubiquitin-protein ligase RBX1, ...
著者Zhao, S, Zhang, K, Xu, C.
登録日2023-05-07
公開日2023-10-18
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.54 Å)
主引用文献Molecular basis for C-degron recognition by CRL2 APPBP2 ubiquitin ligase.
Proc.Natl.Acad.Sci.USA, 120, 2023
8JAU
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BU of 8jau by Molmil
Structure of CRL2APPBP2 bound with the C-degron of MRPL28 (dimer)
分子名称: Amyloid protein-binding protein 2, Cullin-2, Elongin-B, ...
著者Zhao, S, Zhang, K, Xu, C.
登録日2023-05-07
公開日2023-10-18
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Molecular basis for C-degron recognition by CRL2 APPBP2 ubiquitin ligase.
Proc.Natl.Acad.Sci.USA, 120, 2023
8JAV
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BU of 8jav by Molmil
Structure of CRL2APPBP2 bound with the C-degron of MRPL28 (tetramer)
分子名称: Amyloid protein-binding protein 2, Cullin-2, E3 ubiquitin-protein ligase RBX1, ...
著者Zhao, S, Zhang, K, Xu, C.
登録日2023-05-07
公開日2023-10-18
最終更新日2023-10-25
実験手法ELECTRON MICROSCOPY (3.44 Å)
主引用文献Molecular basis for C-degron recognition by CRL2 APPBP2 ubiquitin ligase.
Proc.Natl.Acad.Sci.USA, 120, 2023
2IBI
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BU of 2ibi by Molmil
Covalent Ubiquitin-USP2 Complex
分子名称: ETHANAMINE, Ubiquitin, Ubiquitin carboxyl-terminal hydrolase 2, ...
著者Walker, J.R, Avvakumov, G.V, Bernstein, G, Xue, S, Finerty Jr, P.J, MacKenzie, F, Weigelt, J, Sundstrom, M, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Dhe-Paganon, S, Structural Genomics Consortium (SGC)
登録日2006-09-11
公開日2006-10-24
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Covalent Ubiquitin-USP2 Complex
To be Published
5XVE
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BU of 5xve by Molmil
Crystal structure of human USP2 C276S mutant in complex with ubiquitin
分子名称: Ubiquitin carboxyl-terminal hydrolase 2, Ubiquitin-40S ribosomal protein S27a, ZINC ION
著者Chou, C.Y, Tang, H.C.
登録日2017-06-27
公開日2018-02-28
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献6-Thioguanine is a noncompetitive and slow binding inhibitor of human deubiquitinating protease USP2
Sci Rep, 8, 2018
8IVB
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BU of 8ivb by Molmil
K113-Ubiquitinated BAK
分子名称: Bcl-2 homologous antagonist/killer, Ubiquitin
著者Dong, X, Cheng, P, Hou, Y.Z, Chen, Y.K, Liu, Z.
登録日2023-03-26
公開日2024-01-31
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Parkin-mediated ubiquitination inhibits BAK apoptotic activity by blocking its canonical hydrophobic groove.
Commun Biol, 6, 2023
8JE2
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BU of 8je2 by Molmil
Cryo-EM structure of neddylated Cul2-Rbx1-EloBC-FEM1B complexed with FNIP1-FLCN
分子名称: Cullin-2, Elongin-B, Elongin-C, ...
著者Dai, Z, Liang, L, Yin, Y.X.
登録日2023-05-15
公開日2024-02-28
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.63 Å)
主引用文献Structural insights into the ubiquitylation strategy of the oligomeric CRL2 FEM1B E3 ubiquitin ligase.
Embo J., 43, 2024
2KDE
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BU of 2kde by Molmil
NMR structure of major S5a (196-306):K48 linked diubiquitin species
分子名称: 26S proteasome non-ATPase regulatory subunit 4, Ubiquitin
著者Zhang, N, Wang, Q, Ehlinger, A, Randles, L, Lary, J.W, Kang, Y, Haririnia, A, Cole, J.L, Fushman, D, Walters, K.J.
登録日2009-01-06
公開日2009-09-01
最終更新日2022-03-16
実験手法SOLUTION NMR
主引用文献Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35, 2009
8JE1
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BU of 8je1 by Molmil
An asymmetry dimer of the Cul2-Rbx1-EloBC-FEM1B ubiquitin ligase complexed with BEX2
分子名称: Cullin-2, E3 ubiquitin-protein ligase RBX1, Elongin-B, ...
著者Dai, Z, Liang, L, Yin, Y.X.
登録日2023-05-15
公開日2024-02-28
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.95 Å)
主引用文献Structural insights into the ubiquitylation strategy of the oligomeric CRL2 FEM1B E3 ubiquitin ligase.
Embo J., 43, 2024
8J1P
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BU of 8j1p by Molmil
Cryo-EM structure of Ufd4 in complex with K29/48 triUb
分子名称: Ubiquitin, Ubiquitin fusion degradation protein 4
著者Ai, H.S, Mao, J.X, Wu, X.W, Pan, M, Liu, L.
登録日2023-04-13
公開日2024-04-17
実験手法ELECTRON MICROSCOPY (3.31 Å)
主引用文献Structural Insights into the Molecular Mechanism of Ufd4-catalyzed Elongation of K48-linked Ubiquitin Chain through Lys29 Linkage
To Be Published
5VZM
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BU of 5vzm by Molmil
Solution NMR structure of human Rev1 (932-1039) in complex with ubiquitin
分子名称: DNA repair protein REV1, Ubiquitin
著者Cui, G, Botuyan, M.V, Mer, G.
登録日2017-05-29
公開日2018-05-23
最終更新日2019-12-04
実験手法SOLUTION NMR
主引用文献Structural Basis for the Interaction of Mutasome Assembly Factor REV1 with Ubiquitin.
J. Mol. Biol., 430, 2018
5ZQ4
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BU of 5zq4 by Molmil
PDE-Ubi-ADPr
分子名称: ADENOSINE MONOPHOSPHATE, SidE, ubiquitin
著者Wang, Y, Gao, A, Gao, P.
登録日2018-04-17
公開日2018-05-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.217 Å)
主引用文献Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE.
Cell, 173, 2018
2KHW
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BU of 2khw by Molmil
Solution Structure of the human Polymerase iota UBM2-Ubiquitin Complex
分子名称: Immunoglobulin G-binding protein G, DNA polymerase iota, Ubiquitin
著者Bomar, M.G, D'Souza, S, Bienko, M, Dikic, I, Walker, G.
登録日2009-04-13
公開日2010-02-23
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution Structure of the human Polymerase iota UBM2-Ubiquitin Complex
To be Published
5ZQ3
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BU of 5zq3 by Molmil
PDE-Ubiquitin
分子名称: SidE, Ubiquitin
著者Wang, Y, Gao, A, Gao, P.
登録日2018-04-17
公開日2018-05-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.182 Å)
主引用文献Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE.
Cell, 173, 2018
2KWU
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BU of 2kwu by Molmil
Solution Structure of UBM2 of murine Polymerase iota in Complex with Ubiquitin
分子名称: DNA polymerase iota, Ubiquitin
著者Burschowsky, D, Rudolf, F, Rabut, G, Herrmann, T, Peter, M, Wider, G.
登録日2010-04-19
公開日2010-10-06
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural analysis of the conserved ubiquitin-binding motifs (UBMs) of the translesion polymerase iota in complex with ubiquitin.
J.Biol.Chem., 286, 2011
2KWV
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BU of 2kwv by Molmil
Solution Structure of UBM1 of murine Polymerase iota in Complex with Ubiquitin
分子名称: DNA polymerase iota, Ubiquitin
著者Burschowsky, D, Rudolf, F, Rabut, G, Herrmann, T, Peter, M, Wider, G.
登録日2010-04-20
公開日2010-10-06
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural analysis of the conserved ubiquitin-binding motifs (UBMs) of the translesion polymerase iota in complex with ubiquitin.
J.Biol.Chem., 286, 2011
5ZQ5
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BU of 5zq5 by Molmil
SidE-Ubi
分子名称: SidE, Ubiquitin
著者Wang, Y, Gao, A, Gao, P.
登録日2018-04-17
公開日2018-05-23
最終更新日2018-05-30
実験手法X-RAY DIFFRACTION (2.487 Å)
主引用文献Structural Insights into Non-canonical Ubiquitination Catalyzed by SidE.
Cell, 173, 2018

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件を2024-07-10に公開中

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