2KDE

NMR structure of major S5a (196-306):K48 linked diubiquitin species

Summary for 2KDE

Related1YX4 1YX5 1YX6 1D3Z 2KDF
Descriptor26S proteasome non-ATPase regulatory subunit 4, Ubiquitin (2 entities in total)
Functional Keywordsprotein complex, ubiquitin interacting motifs, cytoplasm, nucleus, ubl conjugation, alternative splicing, phosphoprotein, proteasome, protein binding
Biological sourceHomo sapiens (Human)
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Cellular locationCytoplasm (By similarity) P62972
Total number of polymer chains3
Total molecular weight28980.54
Authors
Zhang, N.,Wang, Q.,Ehlinger, A.,Randles, L.,Lary, J.W.,Kang, Y.,Haririnia, A.,Cole, J.L.,Fushman, D.,Walters, K.J. (deposition date: 2009-01-06, release date: 2009-09-01, Last modification date: 2011-07-13)
Primary citation
Zhang, N.,Wang, Q.,Ehlinger, A.,Randles, L.,Lary, J.W.,Kang, Y.,Haririnia, A.,Storaska, A.J.,Cole, J.L.,Fushman, D.,Walters, K.J.
Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35:280-290, 2009
PubMed: 19683493 (PDB entries with the same primary citation)
DOI: 10.1016/j.molcel.2009.06.010
MImport into Mendeley
Experimental method
SOLUTION NMR
NMR Information
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Structure validation

ClashscoreRamachandran outliersSidechain outliers81.1%6.4%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all NMR structures
Download full validation report