NMR structure of major S5a (196-306):K48 linked diubiquitin species

Summary for 2KDE

Related1YX4 1YX5 1YX6 1D3Z 2KDF
Descriptor26S proteasome non-ATPase regulatory subunit 4, Ubiquitin (2 entities in total)
Functional Keywordsprotein complex, ubiquitin interacting motifs, cytoplasm, nucleus, ubl conjugation, alternative splicing, phosphoprotein, proteasome, protein binding
Biological sourceHomo sapiens (Human)
Cellular locationCytoplasm (By similarity) P62972
Total number of polymer chains3
Total molecular weight28980.54
Zhang, N.,Wang, Q.,Ehlinger, A.,Randles, L.,Lary, J.W.,Kang, Y.,Haririnia, A.,Cole, J.L.,Fushman, D.,Walters, K.J. (deposition date: 2009-01-06, release date: 2009-09-01, Last modification date: 2011-07-13)
Primary citation
Zhang, N.,Wang, Q.,Ehlinger, A.,Randles, L.,Lary, J.W.,Kang, Y.,Haririnia, A.,Storaska, A.J.,Cole, J.L.,Fushman, D.,Walters, K.J.
Structure of the s5a:k48-linked diubiquitin complex and its interactions with rpn13.
Mol.Cell, 35:280-290, 2009
PubMed: 19683493 (PDB entries with the same primary citation)
DOI: 10.1016/j.molcel.2009.06.010
MImport into Mendeley
Experimental method
NMR Information

Structure validation

ClashscoreRamachandran outliersSidechain outliers81.1%6.4%MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all NMR structures
Download full validation report