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PDB: 46 件

4HDD
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Domain swapping in the cytoplasmic domain of the Escherichia coli rhomboid protease
分子名称: ACETATE ION, Rhomboid protease GlpG
著者Lazareno-Saez, C, Arutyunova, E, Coquelle, N, Lemieux, M.J.
登録日2012-10-02
公開日2013-02-06
最終更新日2013-05-22
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Domain swapping in the cytoplasmic domain of the Escherichia coli rhomboid protease.
J.Mol.Biol., 425, 2013
2XOV
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BU of 2xov by Molmil
Crystal Structure of E.coli rhomboid protease GlpG, native enzyme
分子名称: GLYCEROL, RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
著者Vinothkumar, K.R, Strisovsky, K, Andreeva, A, Christova, Y, Verhelst, S, Freeman, M.
登録日2010-08-24
公開日2010-10-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献The structural basis for catalysis and substrate specificity of a rhomboid protease.
EMBO J., 29, 2010
2XTV
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Structure of E.coli rhomboid protease GlpG, active site mutant, S201T, orthorhombic crystal form
分子名称: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, RHOMBOID PROTEASE GLPG
著者Vinothkumar, K.R.
登録日2010-10-12
公開日2011-02-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of rhomboid protease in a lipid environment.
J. Mol. Biol., 407, 2011
3B44
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Crystal structure of GlpG W136A mutant
分子名称: glpG, nonyl beta-D-glucopyranoside
著者Wang, Y, Maegawa, S, Akiyama, Y, Ha, Y.
登録日2007-10-23
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The role of L1 loop in the mechanism of rhomboid intramembrane protease GlpG.
J.Mol.Biol., 374, 2007
5MTF
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A modular route to novel potent and selective inhibitors of rhomboid intramembrane proteases
分子名称: CHLORIDE ION, Rhomboid protease GlpG, inhibitor, ...
著者Ticha, A, Stanchev, S, Vinothkumar, K.R, Mikles, D.C, Pachl, P, Svehlova, K, Nguyen, M.T.N, Verhelst, S.H.L, Johnson, D, Bachovchin, D, Lepsik, M, Majer, P, Strisovsky, K.
登録日2017-01-09
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases.
Cell Chem Biol, 24, 2017
2XTU
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BU of 2xtu by Molmil
Structure of E.coli rhomboid protease GlpG active site mutant, S201T in trigonal crystal form
分子名称: RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
著者Vinothkumar, K.R.
登録日2010-10-12
公開日2011-02-02
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of Rhomboid Protease in a Lipid Environment
J.Mol.Biol., 407, 2011
3B45
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Crystal structure of GlpG at 1.9A resolution
分子名称: glpG, nonyl beta-D-glucopyranoside
著者Wang, Y, Maegawa, S, Akiyama, Y, Ha, Y.
登録日2007-10-23
公開日2008-01-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The role of L1 loop in the mechanism of rhomboid intramembrane protease GlpG.
J.Mol.Biol., 374, 2007
5MT8
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Structure of E.coli GlpG in complex with peptide derived inhibitor Ac-RVRHA-cmk
分子名称: ACE-ARG-VAL-ARG-HIS-ALA-0QE, CHLORIDE ION, Rhomboid protease GlpG, ...
著者Vinothkumar, K.R.
登録日2017-01-06
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases.
Cell Chem Biol, 24, 2017
5MT7
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BU of 5mt7 by Molmil
Structure of E.coli GlpG in complex with peptide derived inhibitor Ac-VRHA-cmk
分子名称: ACE-VAL-ARG-HIS-ALA-0QE, Rhomboid protease GlpG
著者Vinothkumar, K.R.
登録日2017-01-06
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases.
Cell Chem Biol, 24, 2017
2XOW
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Structure of GlpG in complex with a mechanism-based isocoumarin inhibitor
分子名称: 5-AMINO-2-(2-METHOXY-2-OXOETHYL)BENZOIC ACID, RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside
著者Vinothkumar, K.R, Strisovsky, K, Andreeva, A, Christova, Y, Verhelst, S, Freeman, M.
登録日2010-08-24
公開日2010-10-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.09 Å)
主引用文献The Structural Basis for Catalysis and Substrate Specificity of a Rhomboid Protease
Embo J., 29, 2010
2IC8
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BU of 2ic8 by Molmil
Crystal structure of GlpG
分子名称: Protein glpG, nonyl beta-D-glucopyranoside
著者Ha, Y.
登録日2006-09-12
公開日2006-10-17
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of a rhomboid family intramembrane protease.
Nature, 444, 2006
5MT6
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Structure of E.coli GlpG in complex with peptide derived inhibitor Ac-RVRHA-phenylethyl-ketoamide
分子名称: ACE-ARG-VAL-ARG-HIS-ALA-V9C, Rhomboid protease GlpG, nonyl beta-D-glucopyranoside
著者Vinothkumar, K.R.
登録日2017-01-06
公開日2017-11-15
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.16 Å)
主引用文献General and Modular Strategy for Designing Potent, Selective, and Pharmacologically Compliant Inhibitors of Rhomboid Proteases.
Cell Chem Biol, 24, 2017
3ZEB
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A complex of GlpG with isocoumarin inhibitor covalently bonded to serine 201 and histidine 150
分子名称: 2-phenylethyl 2-(4-azanyl-2-methanoyl-phenyl)ethanoate, CHLORIDE ION, RHOMBOID PROTEASE GLPG, ...
著者Vinothkumar, K.R, voskya, O, Kuettler, E.V, Brouwer, A.J, Liskamp, R.M.J, Verhelst, S.H.L.
登録日2012-12-04
公開日2013-02-13
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Activity-Based Probes for Rhomboid Proteases Discovered in a Mass Spectrometry-Based Assay.
Proc.Natl.Acad.Sci.USA, 110, 2013
3ZMI
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Structure of E.coli rhomboid protease GlpG in complex with monobactam L29
分子名称: RHOMBOID PROTEASE GLPG, nonyl beta-D-glucopyranoside, phenyl N-[(1R)-3-oxidanylidene-1-phenyl-propyl]carbamate
著者Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
登録日2013-02-11
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of Rhomboid Protease in Complex with Beta-Lactam Inhibitors Defines the S2' Cavity.
Structure, 21, 2013
6PJ7
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BU of 6pj7 by Molmil
Time-resolved structural snapshot of proteolysis by GlpG inside the membrane
分子名称: Peptide aldehyde inhibitor, Rhomboid protease GlpG
著者Urban, S, Cho, S.
登録日2019-06-28
公開日2019-10-02
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ten catalytic snapshots of rhomboid intramembrane proteolysis from gate opening to peptide release.
Nat.Struct.Mol.Biol., 26, 2019
6VJ8
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BU of 6vj8 by Molmil
Crystal structure of GlpG in complex with peptide chloromethylketone inhibitor
分子名称: Peptide chloromethylketone inhibitor, Rhomboid family intramembrane serine protease GlpG
著者Urban, S, Cho, S.
登録日2020-01-15
公開日2020-09-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Designed Parasite-Selective Rhomboid Inhibitors Block Invasion and Clear Blood-Stage Malaria.
Cell Chem Biol, 27, 2020
3ZMH
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BU of 3zmh by Molmil
Structure of E.coli rhomboid protease GlpG in complex with monobactam L62
分子名称: CHLORIDE ION, CYCLOPENTYL 2-OXO-4-PHENYLAZETIDINE-1-CARBOXYLATE, RHOMBOID PROTEASE GLPG, ...
著者Vinothkumar, K.R, Pierrat, O.A, Large, J.M, Freeman, M.
登録日2013-02-11
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of rhomboid protease in complex with beta-lactam inhibitors defines the S2' cavity.
Structure, 21, 2013
3ZMJ
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BU of 3zmj by Molmil
Structure of E.coli rhomboid protease GlpG in complex with monobactam L61
分子名称: 2-methylpropyl N-[(1R)-3-oxidanylidene-1-phenyl-propyl]carbamate, CHLORIDE ION, RHOMBOID PROTEASE GLPG, ...
著者Vinothkumar, K.R, Pierrat, O, Large, J.M, Freeman, M.
登録日2013-02-11
公開日2013-05-22
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of Rhomboid Protease in Complex with Beta-Lactam Inhibitors Defines the S2' Cavity.
Structure, 21, 2013
6PJ4
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BU of 6pj4 by Molmil
Time-resolved structural snapshot of proteolysis by GlpG inside the membrane
分子名称: Peptide aldehyde inhibitor, Rhomboid protease GlpG
著者Urban, S, Cho, S.
登録日2019-06-27
公開日2019-10-02
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Ten catalytic snapshots of rhomboid intramembrane proteolysis from gate opening to peptide release.
Nat.Struct.Mol.Biol., 26, 2019
6VJ9
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BU of 6vj9 by Molmil
Crystal structure of GlpG in complex with peptide boronate inhibitor
分子名称: ACE-VAL-ARG-MET-B2A, Rhomboid family intramembrane serine protease GlpG
著者Urban, S, Cho, S.
登録日2020-01-15
公開日2020-09-16
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Designed Parasite-Selective Rhomboid Inhibitors Block Invasion and Clear Blood-Stage Malaria.
Cell Chem Biol, 27, 2020
2IRV
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BU of 2irv by Molmil
Crystal structure of GlpG, a rhomboid intramembrane serine protease
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, DODECYL-BETA-D-MALTOSIDE, LAURYL DIMETHYLAMINE-N-OXIDE, ...
著者Bibi, E, Fass, D, Ben-Shem, A.
登録日2006-10-16
公開日2006-10-31
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural basis for intramembrane proteolysis by rhomboid serine proteases.
Proc.Natl.Acad.Sci.Usa, 104, 2007
6XRO
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BU of 6xro by Molmil
Crystal structure of GlpG in complex with peptide boronate inhibitor, Ac-KRFRSMQYSA-B(OH)2
分子名称: CHLORIDE ION, Rhomboid protease GlpG, SODIUM ION, ...
著者Urban, S, Cho, S.
登録日2020-07-13
公開日2020-09-16
最終更新日2024-04-24
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Designed Parasite-Selective Rhomboid Inhibitors Block Invasion and Clear Blood-Stage Malaria.
Cell Chem Biol, 27, 2020
5F5B
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BU of 5f5b by Molmil
Structure of E.Coli GlpG complexed with peptidic inhibitor Ac-VRMA-CHO
分子名称: Rhomboid protease GlpG, peptidic derivative of Gurken: ACE-VAL-ARG-MET-ALA-aldehyde
著者Urban, S, Cho, S, Dickey, S.W.
登録日2015-12-04
公開日2016-02-17
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis.
Mol.Cell, 61, 2016
5F5G
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Structure of E.Coli GlpG Y205F mutant complexed with peptidic inhibitor Ac-RMA-CHO in the DMPC/CHAPSO bicelle
分子名称: ACE-ARG-MET-ALA-aldehyde, Rhomboid protease GlpG
著者Urban, S, Cho, S, Dickey, S.W.
登録日2015-12-04
公開日2016-04-06
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal Structures and Inhibition Kinetics Reveal a Two-Stage Catalytic Mechanism with Drug Design Implications for Rhomboid Proteolysis.
Mol.Cell, 61, 2016
3TXT
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Crystal structure of GlpG in complex with inhibitor DFP
分子名称: DIISOPROPYL PHOSPHONATE, Rhomboid protease glpG
著者Xue, Y, Ha, Y.
登録日2011-09-23
公開日2011-12-07
最終更新日2019-07-17
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献The crystal structure of rhomboid protease GlpG in complex with a mechanism-based inhibitor
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