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8SQ8
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X-ray crystal structure of Acinetobacter baumanii beta-lactamase variant OXA-109 in complex with doripenem
Descriptor: (4R,5S)-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-3-({(3S,5S)-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl}sulfanyl)-4,5-dihydro-1H-pyrrole-2-carboxylic acid, BICARBONATE ION, Beta-lactamase OXA-109
Authors:Powers, R.A, Leonard, D.A, June, C.M, Szarecka, A, Wawrzak, Z.
Deposit date:2023-05-04
Release date:2024-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structural and Dynamic Features of Acinetobacter baumannii OXA-66 beta-Lactamase Explain Its Stability and Evolution of Novel Variants.
J.Mol.Biol., 436, 2024
8SQ7
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X-ray crystal structure of Acinetobacter baumanii beta-lactamase variant OXA-82 K83D in complex with doripenem
Descriptor: (4R,5S)-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-3-({(3S,5S)-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl}sulfanyl)-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Beta-lactamase OXA-82, CITRATE ANION, ...
Authors:Powers, R.A, Leonard, D.A, June, C.M, Szarecka, A, Wawrzak, Z.
Deposit date:2023-05-04
Release date:2024-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural and Dynamic Features of Acinetobacter baumannii OXA-66 beta-Lactamase Explain Its Stability and Evolution of Novel Variants.
J.Mol.Biol., 436, 2024
8P1U
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Structure of divisome complex FtsWIQLB
Descriptor: Cell division protein FtsB, Cell division protein FtsL, Cell division protein FtsQ, ...
Authors:Yang, L, Chang, S, Tang, D, Dong, H.
Deposit date:2023-05-12
Release date:2024-05-22
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into the activation of the divisome complex FtsWIQLB.
Cell Discov, 10, 2024
8VBW
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Structure of the monofunctional Staphylococcus aureus PBP1 in its beta-lactam (Ertapenem) inhibited form
Descriptor: (4R,5S)-3-({(3S,5S)-5-[(3-carboxyphenyl)carbamoyl]pyrrolidin-3-yl}sulfanyl)-5-[(1S,2R)-1-formyl-2-hydroxypropyl]-4-methyl-4,5-dihydro-1H-pyrrole-2-carboxylic acid, Penicillin-binding protein 1
Authors:Bon, C.G, Lee, J, Caveney, N.A, Strynadka, N.C.J.
Deposit date:2023-12-12
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and kinetic analysis of the monofunctional Staphylococcus aureus PBP1.
J.Struct.Biol., 216, 2024
8VBT
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Structure of the monofunctional Staphylococcus aureus PBP1 in its apo form
Descriptor: Penicillin-binding protein 1
Authors:Bon, C.G, Lee, J, Caveney, N.A, Strynadka, N.C.J.
Deposit date:2023-12-12
Release date:2024-05-01
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and kinetic analysis of the monofunctional Staphylococcus aureus PBP1.
J.Struct.Biol., 216, 2024
8VBU
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Structure of the monofunctional Staphylococcus aureus PBP1 in its beta-lactam (Oxacillin) inhibited form
Descriptor: (2R,4S)-5,5-dimethyl-2-[(1R)-1-{[(5-methyl-3-phenyl-1,2-oxazol-4-yl)carbonyl]amino}-2-oxoethyl]-1,3-thiazolidine-4-carb oxylic acid, Penicillin-binding protein 1
Authors:Bon, C.G, Lee, J, Caveney, N.A, Strynadka, N.C.J.
Deposit date:2023-12-12
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural and kinetic analysis of the monofunctional Staphylococcus aureus PBP1.
J.Struct.Biol., 216, 2024
8VBV
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Structure of the monofunctional Staphylococcus aureus PBP1 in its beta-lactam (Cephalexin) inhibited form
Descriptor: (2S)-2-[(1R)-1-{[(2R)-2-amino-2-phenylacetyl]amino}-2-oxoethyl]-5-methyl-3,6-dihydro-2H-1,3-thiazine-4-carboxylic acid, Penicillin-binding protein 1
Authors:Bon, C.G, Lee, J, Caveney, N.A, Strynadka, N.C.J.
Deposit date:2023-12-12
Release date:2024-05-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural and kinetic analysis of the monofunctional Staphylococcus aureus PBP1.
J.Struct.Biol., 216, 2024
8RTZ
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The structure of E. coli penicillin binding protein 3 (PBP3) in complex with a bicyclic peptide inhibitor
Descriptor: 1,1',1''-(1,3,5-triazinane-1,3,5-triyl)tripropan-1-one, Bicyclic peptide inhibitor, Peptidoglycan D,D-transpeptidase FtsI
Authors:Newman, H, Rowland, C.E, Dods, R, Lewis, N, Stanway, S.J, Bellini, D, Beswick, P.
Deposit date:2024-01-29
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Discovery and chemical optimisation of a Potent, Bi-cyclic (Bicycle) Antimicrobial Inhibitor of Escherichia coli PBP3
To Be Published
8VBZ
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Crystal structure of the transpeptidase domain of a S310A mutant of PBP2 from Neisseria gonorrhoeae strain H041
Descriptor: Probable peptidoglycan D,D-transpeptidase PenA
Authors:Stratton, C, Bala, S, Davies, C.
Deposit date:2023-12-13
Release date:2024-03-20
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Ureidopenicillins Are Potent Inhibitors of Penicillin-Binding Protein 2 from Multidrug-Resistant Neisseria gonorrhoeae H041.
Acs Infect Dis., 10, 2024
8VEQ
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Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae cephalosporin-resistant strain H041 in complex with azlocillin
Descriptor: (2R,4S)-5,5-dimethyl-2-[(1R)-2-oxo-1-{[(2R)-2-{[(2-oxoimidazolidin-1-yl)carbonyl]amino}-2-phenylacetyl]amino}ethyl]-1,3-thiazolidine-4-carboxylic acid, Probable peptidoglycan D,D-transpeptidase PenA
Authors:Stratton, C, Bala, S, Davies, C.
Deposit date:2023-12-20
Release date:2024-03-20
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Ureidopenicillins Are Potent Inhibitors of Penicillin-Binding Protein 2 from Multidrug-Resistant Neisseria gonorrhoeae H041.
Acs Infect Dis., 10, 2024
8VEN
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Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae cephalosporin-resistant strain H041 in complex with cefoperazone
Descriptor: (2R,4R)-2-[(1R)-1-{[(2R)-2-[(4-ethyl-2,3-dioxopiperazine-1-carbonyl)amino]-2-(4-hydroxyphenyl)acetyl]amino}-2-oxoethyl]-5-methylidene-1,3-thiazinane-4-carboxylic acid, Probable peptidoglycan D,D-transpeptidase PenA
Authors:Stratton, C, Bala, S, Davies, C.
Deposit date:2023-12-20
Release date:2024-03-20
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Ureidopenicillins Are Potent Inhibitors of Penicillin-Binding Protein 2 from Multidrug-Resistant Neisseria gonorrhoeae H041.
Acs Infect Dis., 10, 2024
8VEP
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Crystal structure of transpeptidase domain of PBP2 from Neisseria gonorrhoeae cephalosporin-resistant strain H041 acylated by piperacillin
Descriptor: DI(HYDROXYETHYL)ETHER, Piperacillin (Open Form), Probable peptidoglycan D,D-transpeptidase PenA
Authors:Stratton, C.M, Bala, S, Davies, C.
Deposit date:2023-12-20
Release date:2024-03-20
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (2.002 Å)
Cite:Ureidopenicillins Are Potent Inhibitors of Penicillin-Binding Protein 2 from Multidrug-Resistant Neisseria gonorrhoeae H041.
Acs Infect Dis., 10, 2024
8PEB
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OXA-48_Q5. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
Descriptor: Beta-lactamase, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Leiros, H.-K.S, Frohlich, C.
Deposit date:2023-06-13
Release date:2024-02-14
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (1.17 Å)
Cite:Epistasis arises from shifting the rate-limiting step during enzyme evolution of a beta-lactamase.
Nat Catal, 7, 2024
8PEC
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OXA-48_Q5-CAZ. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
Descriptor: 1-({(2R)-2-[(1R)-1-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetyl]amino}-2-oxoethyl]-4-carboxy-3,6-dihydro-2H-1,3-thiazin-5-yl}methyl)pyridinium, Beta-lactamase, CHLORIDE ION
Authors:Leiros, H.-K.S, Frohlich, C.
Deposit date:2023-06-13
Release date:2024-02-14
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (2.66 Å)
Cite:Epistasis arises from shifting the rate-limiting step during enzyme evolution of a beta-lactamase.
Nat Catal, 7, 2024
8PEA
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OXA-48_F72L. Epistasis Arises from Shifting the Rate-Limiting Step during Enzyme Evolution
Descriptor: Beta-lactamase, CHLORIDE ION
Authors:Leiros, H.-K.S, Frohlich, C.
Deposit date:2023-06-13
Release date:2024-02-14
Last modified:2024-06-12
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Epistasis arises from shifting the rate-limiting step during enzyme evolution of a beta-lactamase.
Nat Catal, 7, 2024
8U55
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Crystal structure of Enterococcus faecium EnGen25 Penicillin-binding protein 5 (PBP5)
Descriptor: Penicillin-binding protein 5
Authors:Pemberton, O.A, Shamoo, Y.
Deposit date:2023-09-12
Release date:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Enterococcus faecium EnGen25 Penicillin-binding protein 5 (PBP5)
To Be Published
8SQF
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OXA-48 bound to inhibitor CDD-2725
Descriptor: (1M)-3'-(benzyloxy)-5-hydroxy[1,1'-biphenyl]-3,4'-dicarboxylic acid, BICARBONATE ION, Beta-lactamase
Authors:Park, S, Judge, A, Fan, J, Sankaran, B, Prasad, B.V.V, Palzkill, T.
Deposit date:2023-05-04
Release date:2024-01-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Exploiting the Carboxylate-Binding Pocket of beta-Lactamase Enzymes Using a Focused DNA-Encoded Chemical Library.
J.Med.Chem., 67, 2024
8SQG
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OXA-48 bound to inhibitor CDD-2801
Descriptor: (1M)-3'-(benzyloxy)-5-[2-(methylamino)-2-oxoethoxy][1,1'-biphenyl]-3,4'-dicarboxylic acid, BICARBONATE ION, Beta-lactamase
Authors:Park, S, Judge, A, Fan, J, Sankaran, B, Palzkill, T.
Deposit date:2023-05-04
Release date:2024-01-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Exploiting the Carboxylate-Binding Pocket of beta-Lactamase Enzymes Using a Focused DNA-Encoded Chemical Library.
J.Med.Chem., 67, 2024
8C5W
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Crystal Structure of Penicillin-binding Protein 3 (PBP3) from Staphylococcus Epidermidis in complex with Cefotaxime
Descriptor: CEFOTAXIME, C3' cleaved, open, ...
Authors:Schwinzer, M, Brognaro, H, Rohde, H, Betzel, C.
Deposit date:2023-01-10
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure and Dynamics of the Penicillin-Binding Protein 3 from Staphylococcus Epidermidis Native and in Complex with Cefotaxime and Vaborbactam
Int J Appl Biol Pharm, 2023
8C5B
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Crystal Structure of Penicillin-binding Protein 3 (PBP3) from Staphylococcus Epidermidis
Descriptor: Penicillin-binding protein 3
Authors:Schwinzer, M, Brognaro, H, Rohde, H, Betzel, C.
Deposit date:2023-01-06
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure and Dynamics of the Penicillin-Binding Protein 3 from Staphylococcus Epidermidis Native and in Complex with Cefotaxime and Vaborbactam
Int J Appl Biol Pharm, 2023
8C5O
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Crystal Structure of Penicillin-binding Protein 3 (PBP3) from Staphylococcus Epidermidis in complex with Vaborbactam
Descriptor: Penicillin-binding protein 3, Vaborbactam
Authors:Schwinzer, M, Brognaro, H, Rohde, H, Betzel, C.
Deposit date:2023-01-10
Release date:2023-12-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and Dynamics of the Penicillin-Binding Protein 3 from Staphylococcus Epidermidis Native and in Complex with Cefotaxime and Vaborbactam
Int J Appl Biol Pharm, 2023
8F3Y
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Crystal structure of Penicillin Binding Protein 5 (PBP5) Poly-Gly variant penicillin bound form from Enterococcus faecium
Descriptor: OPEN FORM - PENICILLIN G, Penicillin binding protein 5, SULFATE ION
Authors:Schoenle, M.V, D'Andrea, E.D, Choy, M.S, Peti, W, Page, R.
Deposit date:2022-11-10
Release date:2023-11-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:The Molecular Basis for Resistance of E. faecium PBP5 to beta-lactam antibiotics
To Be Published
8F3X
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Crystal structure of Penicillin Binding Protein 5 (PBP5) Poly-Gly variant apo form from Enterococcus faecium
Descriptor: Penicillin binding protein 5, SULFATE ION
Authors:Schoenle, M.V, D'Andrea, E.D, Choy, M.S, Peti, W, Page, R.
Deposit date:2022-11-10
Release date:2023-11-15
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:The Molecular Basis for Resistance of E. faecium PBP5 to beta-lactam antibiotics
To Be Published
8F3W
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Crystal structure of Penicillin Binding Protein 5 (PBP5) PAPAPAP variant penicillin bound form from Enterococcus faecium
Descriptor: OPEN FORM - PENICILLIN G, Penicillin binding protein 5, SULFATE ION
Authors:Schoenle, M.V, D'Andrea, E.D, Choy, M.S, Peti, W, Page, R.
Deposit date:2022-11-10
Release date:2023-11-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The Molecular Basis for Resistance of E. faecium PBP5 to beta-lactam antibiotics
To Be Published
8F3V
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Crystal structure of Penicillin Binding Protein 5 (PBP5) PAPAPAP variant apo form from Enterococcus faecium
Descriptor: Penicillin binding protein 5, SULFATE ION
Authors:Schoenle, M.V, D'Andrea, E.D, Choy, M.S, Peti, W, Page, R.
Deposit date:2022-11-10
Release date:2023-11-15
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The Molecular Basis for Resistance of E. faecium PBP5 to beta-lactam antibiotics
To Be Published

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PDB entries from 2024-06-12

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