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3ZNH
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BU of 3znh by Molmil
Crimean Congo Hemorrhagic Fever Virus OTU domain in complex with ubiquitin-propargyl.
Descriptor: POLYUBIQUITIN-B, UBIQUITIN THIOESTERASE
Authors:Ekkebus, R, vanKasteren, S.I, Kulathu, Y, Scholten, A, Berlin, I, deJong, A, Goerdayal, G, Neefjes, J, Heck, A.J.R, Komander, D, Ovaa, H.
Deposit date:2013-02-14
Release date:2013-02-27
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:On Terminal Alkynes that Can React with Active-Site Cysteine Nucleophiles in Proteases.
J.Am.Chem.Soc., 135, 2013
1XUT
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BU of 1xut by Molmil
Solution structure of TACI-CRD2
Descriptor: Tumor necrosis factor receptor superfamily member 13B
Authors:Hymowitz, S.G, Patel, D.R, Wallweber, H.J, Runyon, S, Yan, M, Yin, J, Shriver, S.K, Gordon, N.C, Pan, B, Skelton, N.J, Kelley, R.F, Starovasnik, M.A.
Deposit date:2004-10-26
Release date:2004-11-09
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:Structures of APRIL-receptor complexes: like BCMA, TACI employs only a single cysteine-rich domain for high affinity ligand binding.
J.Biol.Chem., 280, 2005
1Y4H
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BU of 1y4h by Molmil
Wild type staphopain-staphostatin complex
Descriptor: CHLORIDE ION, SULFATE ION, cysteine protease, ...
Authors:Filipek, R, Potempa, J, Bochtler, M.
Deposit date:2004-11-30
Release date:2005-01-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:A comparison of staphostatin B with standard mechanism serine protease inhibitors.
J.Biol.Chem., 280, 2005
3WEV
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BU of 3wev by Molmil
Crystal structure of the Schiff base intermediate of L-Lys epsilon-oxidase from Marinomonas mediterranea with L-Lys
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, L-lysine 6-oxidase, ...
Authors:Okazaki, S, Nakano, S, Matsui, D, Akaji, S, Inagaki, K, Asano, Y.
Deposit date:2013-07-12
Release date:2013-09-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:X-Ray crystallographic evidence for the presence of the cysteine tryptophylquinone cofactor in L-lysine {varepsilon}-oxidase from Marinomonas mediterranea
J.Biochem., 154, 2013
1XU2
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BU of 1xu2 by Molmil
The crystal structure of APRIL bound to BCMA
Descriptor: NICKEL (II) ION, Tumor necrosis factor ligand superfamily member 13, Tumor necrosis factor receptor superfamily member 17
Authors:Hymowitz, S.G, Patel, D.R, Wallweber, H.J.A, Runyon, S, Yan, M, Yin, J, Shriver, S.K, Gordon, N.C, Pan, B, Skelton, N.J, Kelley, R.F, Starovasnik, M.A.
Deposit date:2004-10-25
Release date:2004-11-09
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structures of APRIL-receptor complexes: Like BCMA, TACI employs only a single cysteine-rich domain for high-affinity ligand binding
J.Biol.Chem., 280, 2005
7KPD
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BU of 7kpd by Molmil
NMR Solution Structure of Acyclotide ribe 31
Descriptor: Acyclotide ribe 31
Authors:Harvey, P.J, Craik, D.J, Dang, T.T.
Deposit date:2020-11-11
Release date:2021-02-24
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:In Planta Discovery and Chemical Synthesis of Bracelet Cystine Knot Peptides from Rinorea bengalensis .
J.Nat.Prod., 2021
3E4H
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BU of 3e4h by Molmil
Crystal structure of the cyclotide varv F
Descriptor: Varv peptide F,Varv peptide F
Authors:Hu, S.H.
Deposit date:2008-08-11
Release date:2009-02-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Combined X-ray and NMR Analysis of the Stability of the Cyclotide Cystine Knot Fold That Underpins Its Insecticidal Activity and Potential Use as a Drug Scaffold
J.Biol.Chem., 284, 2009
2KT2
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BU of 2kt2 by Molmil
Structure of NmerA, the N-terminal HMA domain of Tn501 Mercuric Reductase
Descriptor: Mercuric reductase
Authors:Ledwidge, R, Danacea, F, Dotsch, V, Miller, S.M.
Deposit date:2010-01-17
Release date:2010-09-22
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:NmerA of Tn501 mercuric ion reductase: structural modulation of the pKa values of the metal binding cysteine thiols.
Biochemistry, 49, 2010
2KT3
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BU of 2kt3 by Molmil
Structure of Hg-NmerA, Hg(II) complex of the N-terminal domain of Tn501 Mercuric Reductase
Descriptor: MERCURY (II) ION, Mercuric reductase
Authors:Miller, S.M, Ledwidge, R, Danacea, F, Dotsch, V.
Deposit date:2010-01-17
Release date:2010-09-22
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:NmerA of Tn501 mercuric ion reductase: structural modulation of the pKa values of the metal binding cysteine thiols.
Biochemistry, 49, 2010
5EZD
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BU of 5ezd by Molmil
Crystal structure of a Hepatocyte growth factor activator inhibitor-1 (HAI-1) fragment covering the PKD-like 'internal' domain and Kunitz domain 1
Descriptor: ACETATE ION, Kunitz-type protease inhibitor 1, POTASSIUM ION
Authors:Hong, Z, Andreasen, P.A, Morth, J.P, Jensen, J.K.
Deposit date:2015-11-26
Release date:2016-05-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of a Two-domain Fragment of Hepatocyte Growth Factor Activator Inhibitor-1: FUNCTIONAL INTERACTIONS BETWEEN THE KUNITZ-TYPE INHIBITOR DOMAIN-1 AND THE NEIGHBORING POLYCYSTIC KIDNEY DISEASE-LIKE DOMAIN.
J.Biol.Chem., 291, 2016
8CZL
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BU of 8czl by Molmil
Human LanCL1 bound to methyl glutathione (MeGSH)
Descriptor: Glutathione S-transferase LANCL1, L-GAMMA-GLUTAMYL-S-METHYLCYSTEINYLGLYCINE, ZINC ION
Authors:Ongpipattanakul, C, Nair, S.K.
Deposit date:2022-05-24
Release date:2023-01-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:The mechanism of thia-Michael addition catalyzed by LanC enzymes.
Proc.Natl.Acad.Sci.USA, 120, 2023
1EV5
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BU of 1ev5 by Molmil
CRYSTAL STRUCTURE ANALYSIS OF ALA167 MUTANT OF ESCHERICHIA COLI
Descriptor: SULFATE ION, THYMIDYLATE SYNTHASE
Authors:Phan, J, Mahdavian, E, Nivens, M.C, Minor, W, Berger, S, Spencer, H.T, Dunlap, R.B, Lebioda, L.
Deposit date:2000-04-19
Release date:2000-05-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Catalytic cysteine of thymidylate synthase is activated upon substrate binding.
Biochemistry, 39, 2000
1P57
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BU of 1p57 by Molmil
Extracellular domain of human hepsin
Descriptor: 2-{5-[AMINO(IMINIO)METHYL]-1H-BENZIMIDAZOL-2-YL}BENZENOLATE, Serine protease hepsin
Authors:Somoza, J.R, Ho, J.D, Luong, C, Sprengeler, P.A, Mortara, K, Shrader, W.D, Sperandio, D, Chan, H, McGrath, M.E, Katz, B.A.
Deposit date:2003-04-25
Release date:2004-01-20
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The Structure of the Extracellular Region of Human Hepsin Reveals a Serine Protease Domain and a Novel Scavenger Receptor Cysteine-Rich (SRCR) Domain
Structure, 11, 2003
1WJF
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BU of 1wjf by Molmil
SOLUTION STRUCTURE OF H12C MUTANT OF THE N-TERMINAL ZN BINDING DOMAIN OF HIV-1 INTEGRASE COMPLEXED TO CADMIUM, NMR, 40 STRUCTURES
Descriptor: CADMIUM ION, HIV-1 INTEGRASE
Authors:Cai, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-06-11
Release date:1998-12-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the His12 --> Cys mutant of the N-terminal zinc binding domain of HIV-1 integrase complexed to cadmium.
Protein Sci., 7, 1998
1WJE
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BU of 1wje by Molmil
SOLUTION STRUCTURE OF H12C MUTANT OF THE N-TERMINAL ZN BINDING DOMAIN OF HIV-1 INTEGRASE COMPLEXED TO CADMIUM, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: CADMIUM ION, HIV-1 INTEGRASE
Authors:Cai, M, Gronenborn, A.M, Clore, G.M.
Deposit date:1998-06-11
Release date:1998-12-16
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of the His12 --> Cys mutant of the N-terminal zinc binding domain of HIV-1 integrase complexed to cadmium.
Protein Sci., 7, 1998
6ATM
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BU of 6atm by Molmil
Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
Descriptor: Potassium channel toxin alpha-KTx 3.10
Authors:Gewe, M.M, Rupert, P, Strong, R.K.
Deposit date:2017-08-29
Release date:2018-08-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Exploring Cystine Dense Peptide Space to Open a Unique Molecular Toolbox
To Be Published
2DO2
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BU of 2do2 by Molmil
Design of specific inhibitors of phospholipase A2: Crystal structure of the complex formed between a group II Cys 49 phospholipase A2 and a designed pentapeptide Ala-Leu-Ala-Ser-Lys at 2.6A resolution
Descriptor: Ala-Leu-Ala-Ser-Lys, Phospholipase A2 VRV-PL-VIIIa, SULFATE ION
Authors:Singh, N, Sharma, S, Somvanshi, R.K, Dey, S, Singh, T.P.
Deposit date:2006-04-27
Release date:2006-05-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design of specific inhibitors of phospholipase A2: Crystal structure of the complex formed between a group II Cys 49 phospholipase A2 and a designed pentapeptide Ala-Leu-Ala-Ser-Lys at 2.6A resolution
To be Published
4ZNB
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BU of 4znb by Molmil
METALLO-BETA-LACTAMASE (C181S MUTANT)
Descriptor: METALLO-BETA-LACTAMASE, SODIUM ION, ZINC ION
Authors:Li, Z, Herzberg, O.
Deposit date:1998-10-20
Release date:1999-06-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural consequences of the active site substitution Cys181 --> Ser in metallo-beta-lactamase from Bacteroides fragilis.
Protein Sci., 8, 1999
4J7T
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BU of 4j7t by Molmil
Human LTC4 synthase in complex with product analogs - implications for enzyme catalysis
Descriptor: D-gamma-glutamyl-S-(4-phenylbutyl)-L-cysteinylglycine, Leukotriene C4 synthase, NICKEL (II) ION, ...
Authors:Niegowski, D, Rinaldo-Matthis, A, Haeggstrom, J.Z.
Deposit date:2013-02-14
Release date:2014-01-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.203 Å)
Cite:Crystal Structures of Leukotriene C4 Synthase in Complex with Product Analogs: IMPLICATIONS FOR THE ENZYME MECHANISM.
J.Biol.Chem., 289, 2014
4J7Y
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BU of 4j7y by Molmil
Human LTC4 synthase in complex with product analogs - implications for enzyme catalysis
Descriptor: D-gamma-glutamyl-(Z)-N-(carboxymethylidene)-S-[(2R)-2-hydroxy-4-phenylbutyl]-L-cysteinamide, Leukotriene C4 synthase, NICKEL (II) ION, ...
Authors:Niegowski, D, Rinaldo-Matthis, A, Haeggstrom, J.Z.
Deposit date:2013-02-14
Release date:2014-01-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.901 Å)
Cite:Crystal Structures of Leukotriene C4 Synthase in Complex with Product Analogs: IMPLICATIONS FOR THE ENZYME MECHANISM.
J.Biol.Chem., 289, 2014
3JW9
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BU of 3jw9 by Molmil
Crystal structure of L-methionine gamma-lyase from Citrobacter freundii with S-ethyl-cysteine
Descriptor: DI(HYDROXYETHYL)ETHER, Methionine gamma-lyase, S-ethyl-L-cysteine
Authors:Revtovish, S.V, Nikulin, A.D, Morozova, E.A, Demidkina, T.V.
Deposit date:2009-09-18
Release date:2010-09-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional structures of noncovalent complexes of Citrobacter freundii methionine gamma-lyase with substrates.
Biochemistry Mosc., 76, 2011
4Q31
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BU of 4q31 by Molmil
The crystal structure of cystathione gamma lyase (CalE6) from Micromonospora echinospora
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, FORMIC ACID, ...
Authors:Tan, K, Bigelow, L, Jedrzejczak, R, Babnigg, G, Bingman, C.A, Yennamalli, R.M, Singh, S, Kharel, M.K, Thorson, J.S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-04-10
Release date:2014-05-07
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:Structural dynamics of a methionine gamma-lyase for calicheamicin biosynthesis: Rotation of the conserved tyrosine stacking with pyridoxal phosphate.
Struct Dyn, 3, 2016
1RYW
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BU of 1ryw by Molmil
C115S MurA liganded with reaction products
Descriptor: GLYCEROL, PHOSPHATE ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, ...
Authors:Eschenburg, S, Schonbrunn, E.
Deposit date:2003-12-22
Release date:2004-11-09
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Evidence That the Fosfomycin Target Cys115 in UDP-N-acetylglucosamine Enolpyruvyl Transferase (MurA) Is Essential for Product Release.
J.Biol.Chem., 280, 2005
3CIW
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BU of 3ciw by Molmil
X-RAY structure of the [FeFe]-hydrogenase maturase HydE from thermotoga maritima
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CHLORIDE ION, FeFe-Hydrogenase maturase, ...
Authors:Nicolet, Y, Ruback, J.K, Posewitz, M.C, Amara, P, Mathevon, C, Atta, M, Fontecave, M, Fontecilla-Camps, J.C.
Deposit date:2008-03-12
Release date:2008-04-08
Last modified:2025-03-26
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:X-ray Structure of the [FeFe]-Hydrogenase Maturase HydE from Thermotoga maritima
J.Biol.Chem., 283, 2008
3CIX
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BU of 3cix by Molmil
X-RAY structure of the [FeFe]-hydrogenase maturase HydE from thermotoga maritima in complex with thiocyanate
Descriptor: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Nicolet, Y, Ruback, J.K, Posewitz, M.C, Amara, P, Mathevon, C, Atta, M, Fontecave, M, Fontecilla-Camps, J.C.
Deposit date:2008-03-12
Release date:2008-04-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:X-ray Structure of the [FeFe]-Hydrogenase Maturase HydE from Thermotoga maritima
J.Biol.Chem., 283, 2008

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