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7XVF
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Nav1.7 mutant class2
Descriptor: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Huang, G, Wu, Q, Li, Z, Pan, X, Yan, N.
Deposit date:2022-05-22
Release date:2022-08-10
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Unwinding and spiral sliding of S4 and domain rotation of VSD during the electromechanical coupling in Na v 1.7.
Proc.Natl.Acad.Sci.USA, 119, 2022
8CXJ
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BU of 8cxj by Molmil
The IgI3 domain of R28 protein from S. pyogenes bound to CEACAM1
Descriptor: CHLORIDE ION, Carcinoembryonic antigen-related cell adhesion molecule 1, GLYCEROL, ...
Authors:Bonsor, D.A, McCarthy, A.J.
Deposit date:2022-05-21
Release date:2023-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Human CEACAM1 is targeted by a Streptococcus pyogenes adhesin implicated in puerperal sepsis pathogenesis.
Nat Commun, 14, 2023
7XVE
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BU of 7xve by Molmil
Human Nav1.7 mutant class-I
Descriptor: (2S,3R,4E)-2-(acetylamino)-3-hydroxyoctadec-4-en-1-yl dihydrogen phosphate, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-O-OCTADECYL-SN-GLYCERO-3-PHOSPHOCHOLINE, ...
Authors:Huang, G, Wu, Q, Li, Z, Pan, X, Yan, N.
Deposit date:2022-05-21
Release date:2022-08-10
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Unwinding and spiral sliding of S4 and domain rotation of VSD during the electromechanical coupling in Na v 1.7.
Proc.Natl.Acad.Sci.USA, 119, 2022
8CWK
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BU of 8cwk by Molmil
Fab arm of antibodies 4G1-C2 and 10G4 bound to CoV-2 receptor binding domain (RBD)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Heavy chain of Fab arm of antibody 10G4, ...
Authors:Langley, D.B, Christ, D.
Deposit date:2022-05-19
Release date:2023-05-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.368 Å)
Cite:Neutralization of CoV-2 omicron sublineages by affinity-matured class 5 antibodies
To Be Published
7XT6
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BU of 7xt6 by Molmil
Structure of a membrane protein M3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, B-cell antigen receptor complex-associated protein alpha chain, ...
Authors:Ma, X, Zhu, Y, Chen, Y, Huang, Z.
Deposit date:2022-05-16
Release date:2022-08-31
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Cryo-EM structures of two human B cell receptor isotypes.
Science, 377, 2022
7XQ8
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BU of 7xq8 by Molmil
Structure of human B-cell antigen receptor of the IgM isotype
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, B-cell antigen receptor complex-associated protein alpha chain, B-cell antigen receptor complex-associated protein beta chain, ...
Authors:Chen, M.Y, Su, Q, Shi, Y.G.
Deposit date:2022-05-07
Release date:2022-08-17
Last modified:2022-08-31
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of the human IgM B cell receptor.
Science, 377, 2022
7UXO
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BU of 7uxo by Molmil
Structure of PDL1 in complex with FP30790, a Helicon Polypeptide
Descriptor: AMINO GROUP, FP30790, N,N'-(1,4-phenylene)diacetamide, ...
Authors:Li, K, Agarwal, S, Tokareva, O, Thomson, T, Travaline, T, Tattersfield, H, Wahl, S, Verdine, G, McGee, J.
Deposit date:2022-05-05
Release date:2022-12-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:De novo mapping of alpha-helix recognition sites on protein surfaces using unbiased libraries.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UXQ
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BU of 7uxq by Molmil
Structure of PDL1 in complex with FP28135, a Helicon Polypeptide
Descriptor: 1,2-ETHANEDIOL, FP28135, N,N'-(1,4-phenylene)diacetamide, ...
Authors:Li, K, Agarwal, S, Tokareva, O, Thomson, T, Travaline, T, Wahl, S, Verdine, G, McGee, J.
Deposit date:2022-05-05
Release date:2022-12-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:De novo mapping of alpha-helix recognition sites on protein surfaces using unbiased libraries.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UXP
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BU of 7uxp by Molmil
Structure of PDL1 in complex with FP28132, a Helicon Polypeptide
Descriptor: AMINO GROUP, FP28132, N,N'-(1,4-phenylene)diacetamide, ...
Authors:Li, K, Agarwal, S, Tokareva, O, Thomson, T, Travaline, T, Tattersfield, H, Wahl, S, Verdine, G, McGee, J.
Deposit date:2022-05-05
Release date:2022-12-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.62 Å)
Cite:De novo mapping of alpha-helix recognition sites on protein surfaces using unbiased libraries.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UX5
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BU of 7ux5 by Molmil
Structure of PDL1 in complex with FP28136, a Helicon Polypeptide
Descriptor: Helicon FP28136, N,N'-(1,4-phenylene)diacetamide, Programmed cell death 1 ligand 1
Authors:Agarwal, S, Li, K, Tokareva, O, Thomson, T, Travaline, T, Wahl, S, Verdine, G, McGee, J.
Deposit date:2022-05-05
Release date:2022-12-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:De novo mapping of alpha-helix recognition sites on protein surfaces using unbiased libraries.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UVF
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BU of 7uvf by Molmil
Crystal structure of ZED8 Fab complex with CD8 alpha
Descriptor: CHLORIDE ION, GLYCEROL, Immunoglobulin heavy chain, ...
Authors:Yu, C, Davies, C, Koerber, J.T, Williams, S.
Deposit date:2022-05-01
Release date:2022-10-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Preclinical development of ZED8, an 89 Zr immuno-PET reagent for monitoring tumor CD8 status in patients undergoing cancer immunotherapy.
Eur J Nucl Med Mol Imaging, 50, 2023
7ZOZ
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BU of 7zoz by Molmil
Crystal structure of Siglec-15 in complex with Fab
Descriptor: Anti-Siglec 15 Fab HC, Anti-Siglec 15 Fab LC, Sialic acid-binding Ig-like lectin 15
Authors:Lenza, M.P, Oyenarte, I, Jimenez-Barbero, J, Ereno-Orbea, J.
Deposit date:2022-04-26
Release date:2023-06-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.104 Å)
Cite:Structural insights into Siglec-15 reveal glycosylation dependency for its interaction with T cells through integrin CD11b.
Nat Commun, 14, 2023
7XM9
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BU of 7xm9 by Molmil
Cryo-EM structure of human NaV1.7/beta1/beta2-XEN907
Descriptor: (7~{R})-1'-pentylspiro[6~{H}-furo[3,2-f][1,3]benzodioxole-7,3'-indole]-2'-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:zhang, J.T, Jiang, D.H.
Deposit date:2022-04-25
Release date:2022-11-30
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.22 Å)
Cite:Structural basis for Na V 1.7 inhibition by pore blockers.
Nat.Struct.Mol.Biol., 29, 2022
7XMF
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BU of 7xmf by Molmil
Cryo-EM structure of human NaV1.7/beta1/beta2-Nav1.7-IN2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-[[4-[3-(4-fluoranyl-2-methyl-phenoxy)azetidin-1-yl]pyrimidin-2-yl]amino]-~{N}-methyl-benzamide, ...
Authors:Zhang, J.T, Jiang, D.H.
Deposit date:2022-04-25
Release date:2022-11-30
Last modified:2022-12-28
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:Structural basis for Na V 1.7 inhibition by pore blockers.
Nat.Struct.Mol.Biol., 29, 2022
7XMG
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BU of 7xmg by Molmil
Cryo-EM structure of human NaV1.7/beta1/beta2-TCN-1752
Descriptor: (1~{Z})-~{N}-[2-methyl-3-[(~{E})-[6-[4-[[4-(trifluoromethyloxy)phenyl]methoxy]piperidin-1-yl]-1~{H}-1,3,5-triazin-2-ylidene]amino]phenyl]ethanimidic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Jiang, D.H, Zhang, J.T.
Deposit date:2022-04-25
Release date:2022-11-30
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Structural basis for Na V 1.7 inhibition by pore blockers.
Nat.Struct.Mol.Biol., 29, 2022
7ZLI
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BU of 7zli by Molmil
Cryo-EM structure of C-mannosyltransferase CeDPY19, in complex with Dol25-P-Man and bound to CMT2-Fab and anti-Fab nanobody
Descriptor: Anti-Fab nanobody, C-mannosyltransferase dpy-19, CMT2-Fab heavy chain, ...
Authors:Bloch, J.S, Mukherjee, S, Boilevin, J, Irobalieva, R, Darbre, T, Reymond, J.L, Kossiakoff, A.A, Goddard-Borger, E.D, Locher, K.P.
Deposit date:2022-04-15
Release date:2023-01-11
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (2.99 Å)
Cite:Structure, sequon recognition and mechanism of tryptophan C-mannosyltransferase.
Nat.Chem.Biol., 19, 2023
7ZLG
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BU of 7zlg by Molmil
Cryo-EM structure of C-mannosyltransferase CeDPY19, in complex with acceptor peptide and bound to CMT2-Fab and anti-Fab nanobody
Descriptor: Anti-Fab nanobody, C-mannosyltransferase dpy-19, CMT2-Fab heavy chain, ...
Authors:Bloch, J.S, Mukherjee, S, Mao, R, Irobalieva, R, Kossiakoff, A.A, Goddard-Borger, E.D, Locher, K.P.
Deposit date:2022-04-15
Release date:2023-01-11
Last modified:2023-05-10
Method:ELECTRON MICROSCOPY (2.72 Å)
Cite:Structure, sequon recognition and mechanism of tryptophan C-mannosyltransferase.
Nat.Chem.Biol., 19, 2023
7ZLJ
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BU of 7zlj by Molmil
Cryo-EM structure of C-mannosyltransferase CeDPY19, in ternary complex with Dol25-P-C-Man and acceptor peptide, bound to CMT2-Fab and anti-Fab nanobody
Descriptor: Anti-Fab nanobody, C-mannosyltransferase dpy-19, CMT2-Fab heavy chain, ...
Authors:Bloch, J.S, Mao, R, Mukherjee, S, Boilevin, J, Irobalieva, R, Darbre, T, Reymond, J.L, Kossiakoff, A.A, Goddard-Borger, E.D, Locher, K.P.
Deposit date:2022-04-15
Release date:2023-01-11
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.63 Å)
Cite:Structure, sequon recognition and mechanism of tryptophan C-mannosyltransferase.
Nat.Chem.Biol., 19, 2023
7UMG
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BU of 7umg by Molmil
Crystal structure of human CD8aa-MR1-Ac-6-FP complex
Descriptor: Beta-2-microglobulin, CHLORIDE ION, Major histocompatibility complex class I-related gene protein, ...
Authors:Awad, W, Rossjohn, J.
Deposit date:2022-04-06
Release date:2022-08-03
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:CD8 coreceptor engagement of MR1 enhances antigen responsiveness by human MAIT and other MR1-reactive T cells.
J.Exp.Med., 219, 2022
7XAE
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BU of 7xae by Molmil
Crystal strucutre of PD-L1 and 3ONJA protein
Descriptor: 2IC6, Programmed cell death 1 ligand 1
Authors:Liu, K.F, Xu, Z.P, Han, P, Gao, G.F, Chai, Y, Tan, S.G.
Deposit date:2022-03-17
Release date:2023-09-20
Method:X-RAY DIFFRACTION (3.44 Å)
Cite:Crystal strucutre of PD-L1 and 2IC6 protein
To Be Published
7XAD
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BU of 7xad by Molmil
Crystal strucutre of PD-L1 and DBL2_02 designed protein binder
Descriptor: DBL2_02 binder, Programmed cell death 1 ligand 1
Authors:Liu, K.F, Xu, Z.P, Han, P, Pacesa, M, Gao, G.F, Chai, Y, Tan, S.G.
Deposit date:2022-03-17
Release date:2023-04-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:De novo design of protein interactions with learned surface fingerprints.
Nature, 617, 2023
7TY0
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BU of 7ty0 by Molmil
Nipah Virus attachment (G) glycoprotein ectodomain in complex with nAH1.3 neutralizing antibody Fab fragment (local refinement of the stalk region)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Wang, Z.Q, Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D.
Deposit date:2022-02-10
Release date:2022-03-09
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Architecture and antigenicity of the Nipah virus attachment glycoprotein.
Science, 375, 2022
7WVM
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BU of 7wvm by Molmil
The complex structure of PD-1 and cemiplimab
Descriptor: Heavy Chain of Cemiplimab, Light Chain of Cemiplimab, Programmed cell death protein 1
Authors:Lu, D, Xu, Z.P, Liu, K.F, Tan, S.G, Gao, G.F, Chai, Y.
Deposit date:2022-02-10
Release date:2022-04-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:PD-1 N58-Glycosylation-Dependent Binding of Monoclonal Antibody Cemiplimab for Immune Checkpoint Therapy.
Front Immunol, 13, 2022
7WSL
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BU of 7wsl by Molmil
PD-1 in complex with Dostarlimab
Descriptor: Programmed cell death protein 1, heavy chain, light chain
Authors:Heo, Y.S.
Deposit date:2022-01-30
Release date:2022-08-24
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.534 Å)
Cite:Molecular basis of PD-1 blockade by dostarlimab, the FDA-approved antibody for cancer immunotherapy.
Biochem.Biophys.Res.Commun., 599, 2022
7WSO
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BU of 7wso by Molmil
Structure of a membrane protein G
Descriptor: B-cell antigen receptor complex-associated protein alpha chain, B-cell antigen receptor complex-associated protein beta chain, Immunoglobulin heavy constant gamma 1
Authors:Ma, X, Zhu, Y, Chen, Y, Huang, Z.
Deposit date:2022-01-30
Release date:2022-08-31
Method:ELECTRON MICROSCOPY (3.03 Å)
Cite:Cryo-EM structures of two human B cell receptor isotypes.
Science, 377, 2022

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