PDB: 35140 resultsInfo pagesStatus searchChemie searchBIRD

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7Z8R	CAND1-CUL1-RBX1 Descriptor: Cullin-1, Cullin-associated NEDD8-dissociated protein 1, E3 ubiquitin-protein ligase RBX1, ... Authors: Baek, K, Schulman, B.A. Deposit date: 2022-03-18 Release date: 2023-04-19 Last modified: 2023-05-10 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Systemwide disassembly and assembly of SCF ubiquitin ligase complexes. Cell, 186, 2023
2LWJ	NMR solution structure Myxoccoccus xanthus CdnL Descriptor: Transcriptional regulator, CarD family Authors: Jimenez, M, Padmanabhan, S, Mirassou, Y. Deposit date: 2012-08-01 Release date: 2014-02-05 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural Insights into RNA Polymerase Recognition and Essential Function of Myxococcus xanthus CdnL. Plos One, 9, 2014
7Z8V	CAND1-SCF-SKP2 (SKP1deldel) CAND1 engaged SCF rocked Descriptor: Cullin-1, Cullin-associated NEDD8-dissociated protein 1, E3 ubiquitin-protein ligase RBX1, ... Authors: Baek, K, Schulman, B.A. Deposit date: 2022-03-18 Release date: 2023-04-19 Last modified: 2023-05-10 Method: ELECTRON MICROSCOPY (2.7 Å) Cite: Systemwide disassembly and assembly of SCF ubiquitin ligase complexes. Cell, 186, 2023
7Z8T	CAND1-SCF-SKP2 CAND1 engaged SCF rocked Descriptor: Cullin-1, Cullin-associated NEDD8-dissociated protein 1, E3 ubiquitin-protein ligase RBX1, ... Authors: Baek, K, Schulman, B.A. Deposit date: 2022-03-18 Release date: 2023-04-19 Last modified: 2023-05-10 Method: ELECTRON MICROSCOPY (3 Å) Cite: Systemwide disassembly and assembly of SCF ubiquitin ligase complexes. Cell, 186, 2023
2CB3	Crystal structure of peptidoglycan recognition protein-LE in complex with tracheal cytotoxin (monomeric diaminopimelic acid-type peptidoglycan) Descriptor: GLCNAC(BETA1-4)-MURNAC(1,6-ANHYDRO)-L-ALA-GAMMA-D-GLU-MESO-A2PM-D-ALA, GLYCEROL, PEPTIDOGLYCAN-RECOGNITION PROTEIN-LE Authors: Lim, J.-H, Kim, M.-S, Oh, B.-H. Deposit date: 2005-12-29 Release date: 2006-01-26 Last modified: 2023-12-13 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Structural Basis for Preferential Recognition of Diaminopimelic Acid-Type Peptidoglycan by a Subset of Peptidoglycan Recognition Proteins J.Biol.Chem., 281, 2006
7YNX	Crystal structure of Pirh2 bound to poly-Ala peptide Descriptor: RING finger and CHY zinc finger domain-containing protein 1, SODIUM ION, SULFATE ION, ... Authors: Dong, C, Yan, X, Li, Y. Deposit date: 2022-08-01 Release date: 2023-04-26 Last modified: 2024-05-29 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Recognition of an Ala-rich C-degron by the E3 ligase Pirh2. Nat Commun, 14, 2023
6I9H	Solution structure of TRIM28 RING domain Descriptor: Transcription intermediary factor 1-beta, ZINC ION Authors: Stevens, R.V, Esposito, D, Rittinger, K. Deposit date: 2018-11-23 Release date: 2019-05-01 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: Characterisation of class VI TRIM RING domains: linking RING activity to C-terminal domain identity. Life Sci Alliance, 2, 2019
6I9B	NMR structure of the La module from human LARP4A Descriptor: La-related protein 4 Authors: Conte, M.R, Martino, L, Atkinson, R.A, Kelly, G, Cruz-Gallardo, I, De Tito, S, Trotta, R. Deposit date: 2018-11-22 Release date: 2019-03-13 Last modified: 2024-06-19 Method: SOLUTION NMR Cite: LARP4A recognizes polyA RNA via a novel binding mechanism mediated by disordered regions and involving the PAM2w motif, revealing interplay between PABP, LARP4A and mRNA. Nucleic Acids Res., 47, 2019
7ZBW	CAND1-SCF-SKP2 CAND1 rolling-2 SCF engaged Descriptor: Cullin-1, Cullin-associated NEDD8-dissociated protein 1, E3 ubiquitin-protein ligase RBX1, ... Authors: Baek, K, Schulman, B.A. Deposit date: 2022-03-24 Release date: 2023-04-19 Last modified: 2023-05-10 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Systemwide disassembly and assembly of SCF ubiquitin ligase complexes. Cell, 186, 2023
2M0E	Solution Structure of Miz-1 zinc finger 6 Descriptor: ZINC ION, Zinc finger and BTB domain-containing protein 17 Authors: Bernard, D, Bedard, M, Bilodeau, J, Lavigne, P. Deposit date: 2012-10-24 Release date: 2012-11-14 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: NMR Structure Note: Solution Structure of Miz-1 Zinc Fingers 5 to 7 To be Published
8HR1	Cryo-EM structure of SSX1 bound to the unmodified nucleosome at a resolution of 3.02 angstrom Descriptor: DNA (147-MER), Histone H2A type 1-B/E, Histone H2B type 1-K, ... Authors: Zebin, T, Ai, H.S, Ziyu, X, Man, P, Liu, L. Deposit date: 2022-12-14 Release date: 2023-09-13 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.02 Å) Cite: Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes. Nat.Struct.Mol.Biol., 31, 2024
6J5S	Crystal structure of human HINT1 mutant complexing with AP5A Descriptor: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ETHANESULFONIC ACID, Histidine triad nucleotide-binding protein 1 Authors: Wang, J, Fang, P, Guo, M. Deposit date: 2019-01-11 Release date: 2019-09-25 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (1.02 Å) Cite: Second messenger Ap4A polymerizes target protein HINT1 to transduce signals in Fc epsilon RI-activated mast cells. Nat Commun, 10, 2019
6J1Z	WWP2 semi-open conformation Descriptor: NEDD4-like E3 ubiquitin-protein ligase WWP2 Authors: Liu, Z.H. Deposit date: 2018-12-30 Release date: 2019-07-24 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.7 Å) Cite: A multi-lock inhibitory mechanism for fine-tuning enzyme activities of the HECT family E3 ligases. Nat Commun, 10, 2019
8HQY	Cryo-EM structure of SSX1 bound to the H2AK119Ub nucleosome at a resolution of 3.05 angstrom Descriptor: DNA (136-MER), DNA (137-MER), Histone H2A type 1-B/E, ... Authors: Zebin, T, Ai, H.S, Ziyu, X, GuoChao, C, Man, P, Liu, L. Deposit date: 2022-12-14 Release date: 2023-09-27 Last modified: 2024-03-06 Method: ELECTRON MICROSCOPY (3.05 Å) Cite: Synovial sarcoma X breakpoint 1 protein uses a cryptic groove to selectively recognize H2AK119Ub nucleosomes. Nat.Struct.Mol.Biol., 31, 2024
7DG5	Crystal structure of mouse Smc1-Smc3 hinge domain containing a D574Y mutation Descriptor: Structural maintenance of chromosomes protein 1A, Structural maintenance of chromosomes protein 3 Authors: Seo, H, Noh, H, Oh, B.-H. Deposit date: 2020-11-11 Release date: 2021-11-17 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2 Å) Cite: Folding of cohesin's coiled coil is important for Scc2/4-induced association with chromosomes. Elife, 10, 2021
7K06	Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases Descriptor: CYTIDINE-5'-MONOPHOSPHATE, ERI1 exoribonuclease 3, MAGNESIUM ION Authors: Thapar, R, Arvai, A.S, Tainer, J.A. Deposit date: 2020-09-03 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.95 Å) Cite: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3'- 5' exoribonucleases To Be Published
1U4Q	Crystal Structure of Repeats 15, 16 and 17 of Chicken Brain Alpha Spectrin Descriptor: Spectrin alpha chain, brain Authors: Kusunoki, H, Minasov, G, MacDonald, R.I, Mondragon, A. Deposit date: 2004-07-26 Release date: 2004-10-19 Last modified: 2024-03-13 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Independent Movement, Dimerization and Stability of Tandem Repeats of Chicken Brain alpha-Spectrin J.Mol.Biol., 344, 2004
5M32	Human 26S proteasome in complex with Oprozomib Descriptor: 26S protease regulatory subunit 10B, 26S protease regulatory subunit 4, 26S protease regulatory subunit 6A, ... Authors: Haselbach, D, Schrader, J, Lambrecht, F, Henneberg, F, Chari, A, Stark, H. Deposit date: 2016-10-14 Release date: 2017-07-05 Last modified: 2019-12-11 Method: ELECTRON MICROSCOPY (3.8 Å) Cite: Long-range allosteric regulation of the human 26S proteasome by 20S proteasome-targeting cancer drugs. Nat Commun, 8, 2017
7K07	Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases Descriptor: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, MANGANESE (II) ION Authors: Thapar, R, Arvai, A.S, Tainer, J.A. Deposit date: 2020-09-03 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.15 Å) Cite: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3'- 5' exoribonucleases To Be Published
7K05	Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3-prime - 5-prime exoribonucleases Descriptor: ADENOSINE MONOPHOSPHATE, ERI1 exoribonuclease 3, GLYCEROL, ... Authors: Thapar, R, Andrew, A.S, Tainer, J.A. Deposit date: 2020-09-03 Release date: 2021-10-06 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Crystal structures and ribonuclease activity of the Flavivirus host factor ERI3 that is involved in viral RNA synthesis define the ERI subfamily of structure-specific 3' - 5' exoribonucleases To Be Published
2MBH	NMR structure of EKLF(22-40)/Ubiquitin Complex Descriptor: Krueppel-like factor 1, Ubiquitin Authors: Raiola, L, Omichinski, J.G. Deposit date: 2013-07-31 Release date: 2013-10-09 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structural Characterization of a Noncovalent Complex between Ubiquitin and the Transactivation Domain of the Erythroid-Specific Factor EKLF. Structure, 21, 2013
7DLV	shrimp dUTPase in complex with Stl Descriptor: CALCIUM ION, Orf20, SULFATE ION, ... Authors: Ma, Q, Wang, F. Deposit date: 2020-11-30 Release date: 2021-12-01 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.525 Å) Cite: Structural basis of staphylococcal Stl inhibition on a eukaryotic dUTPase. Int.J.Biol.Macromol., 184, 2021
4DUQ	The Structure of Ca2+-loaded S100A2 at 1.3A resolution Descriptor: CALCIUM ION, POLYETHYLENE GLYCOL (N=34), Protein S100-A2 Authors: Koch, M, Fritz, G. Deposit date: 2012-02-22 Release date: 2012-03-07 Last modified: 2024-02-28 Method: X-RAY DIFFRACTION (1.3 Å) Cite: The structure of Ca2+-loaded S100A2 at 1.3- angstrom resolution. Febs J., 279, 2012
2M68	NMR solution structure ensemble of 3-4D mutant domain 11 IGF2R in complex with IGF2 (domain 11 structure only) Descriptor: Insulin-like growth factor 2 receptor variant Authors: Strickland, M, Williams, C, Richards, E, Minnall, L, Crump, M.P, Frago, S, Hughes, J, Garner, L, Hoppe, H, Rezgui, D, Zaccheo, O.J, Prince, S.N, Hassan, A.B, Whittaker, S. Deposit date: 2013-03-27 Release date: 2014-10-15 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Functional evolution of IGF2:IGF2R domain 11 binding generates novel structural interactions and a specific IGF2 antagonist. Proc.Natl.Acad.Sci.USA, 113, 2016
2M9Y	Solution Structure of the Catalytic Domain of HHARI Descriptor: E3 ubiquitin-protein ligase ARIH1, ZINC ION Authors: Mercier, P, Spratt, D.E, Shaw, G.S. Deposit date: 2013-06-24 Release date: 2013-11-13 Last modified: 2024-05-15 Method: SOLUTION NMR Cite: Structure of the HHARI catalytic domain shows glimpses of a HECT E3 ligase. Plos One, 8, 2013

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