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6O5J
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BU of 6o5j by Molmil
Crystal Structure of DAD2 bound to quinazolinone derivative
Descriptor: 1-(4-hydroxy-3-nitrophenyl)quinazoline-2,4(1H,3H)-dione, ACETATE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Hamiaux, C.
Deposit date:2019-03-03
Release date:2019-06-26
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Chemical synthesis and characterization of a new quinazolinedione competitive antagonist for strigolactone receptors with an unexpected binding mode.
Biochem.J., 476, 2019
6OL9
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BU of 6ol9 by Molmil
Structure of the M5 muscarinic acetylcholine receptor (M5-T4L) bound to tiotropium
Descriptor: (1R,2R,4S,5S,7S)-7-{[hydroxy(dithiophen-2-yl)acetyl]oxy}-9,9-dimethyl-3-oxa-9-azoniatricyclo[3.3.1.0~2,4~]nonane, (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, ...
Authors:Vuckovic, Z, Christopoulos, A, Thal, D.M.
Deposit date:2019-04-16
Release date:2019-12-11
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.541 Å)
Cite:Crystal structure of the M5muscarinic acetylcholine receptor.
Proc.Natl.Acad.Sci.USA, 116, 2019
6OLG
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BU of 6olg by Molmil
Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with PP tRNA)
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
Authors:Li, W, Cate, J.H.D.
Deposit date:2019-04-16
Release date:2019-06-19
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for selective stalling of human ribosome nascent chain complexes by a drug-like molecule.
Nat.Struct.Mol.Biol., 26, 2019
6OY9
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BU of 6oy9 by Molmil
Structure of the Rhodopsin-Transducin Complex
Descriptor: Gt-alpha/Gi1-alpha chimera, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(T) subunit gamma-T1, ...
Authors:Gao, Y, Hu, H, Ramachandran, S, Erickson, J.W, Cerione, R.A, Skiniotis, G.
Deposit date:2019-05-14
Release date:2019-07-24
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structures of the Rhodopsin-Transducin Complex: Insights into G-Protein Activation.
Mol.Cell, 75, 2019
6ON6
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BU of 6on6 by Molmil
Crystal Structure of the RIG-5 IG1 homodimer
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, NeuRonal IgCAM-5
Authors:Cheng, S, Kurleto, J.D, Ozkan, E.
Deposit date:2019-04-20
Release date:2019-05-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.423 Å)
Cite:Family of neural wiring receptors in bilaterians defined by phylogenetic, biochemical, and structural evidence.
Proc.Natl.Acad.Sci.USA, 116, 2019
6ONF
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BU of 6onf by Molmil
Crystal structure of HIV-1 LM/HT Clade A/E CRF01 gp120 core in complex with (S)-MCG-III-188-A02.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, clade A/E 93TH057 HIV-1 gp120 core, ...
Authors:Tolbert, W.D, Sherburn, R, Pazgier, M.
Deposit date:2019-04-22
Release date:2019-10-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.842 Å)
Cite:A New Family of Small-Molecule CD4-Mimetic Compounds Contacts Highly Conserved Aspartic Acid 368 of HIV-1 gp120 and Mediates Antibody-Dependent Cellular Cytotoxicity.
J.Virol., 93, 2019
6OR9
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BU of 6or9 by Molmil
Structure of L-lactate dehydrogenase from Trichoplusia ni
Descriptor: L-lactate dehydrogenase
Authors:Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2019-04-29
Release date:2019-07-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of L-lactate dehydrogenase from Trichoplusia ni
to be published
8V1T
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BU of 8v1t by Molmil
Herpes simplex virus 1 polymerase holoenzyme bound to DNA and acyclovir triphosphate in closed conformation
Descriptor: ACYCLOVIR TRIPHOSPHATE, DNA polymerase, DNA polymerase processivity factor, ...
Authors:Pan, J, Abraham, J, Coen, D.M, Shankar, S, Yang, P, Hogle, J.
Deposit date:2023-11-21
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Viral DNA polymerase structures reveal mechanisms of antiviral drug resistance.
Cell, 187, 2024
6OXN
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BU of 6oxn by Molmil
2.6 Angstrom structure of W45F/H46S Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
Descriptor: GLYCEROL, GLYOXYLIC ACID, Glyoxylate/hydroxypyruvate reductase A, ...
Authors:Vuksanovic, N, Silvaggi, N.R.
Deposit date:2019-05-13
Release date:2020-05-20
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:2.1 Angstrom structure of wild type Glyoxylate/Hydroxypyruvate reductase A from Escherichia Coli in complex with glyoxylate and NADP
To Be Published
8V1R
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BU of 8v1r by Molmil
Herpes simplex virus 1 polymerase holoenzyme bound to DNA and DTTP in closed conformation
Descriptor: DNA polymerase, DNA polymerase processivity factor, MAGNESIUM ION, ...
Authors:Pan, J, Abraham, J, Coen, D.M, Shankar, S, Yang, P, Hogle, J.
Deposit date:2023-11-21
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Viral DNA polymerase structures reveal mechanisms of antiviral drug resistance.
Cell, 187, 2024
6OYU
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BU of 6oyu by Molmil
Structure of an ancestral-reconstructed cytochrome P450 1B1 with alpha-naphthoflavone
Descriptor: 2-PHENYL-4H-BENZO[H]CHROMEN-4-ONE, Cytochrome P450 1B1, GLYCEROL, ...
Authors:Bart, A.G, Harris, K.L, Scott, E.E.
Deposit date:2019-05-15
Release date:2020-03-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of an ancestral mammalian family 1B1 cytochrome P450 with increased thermostability.
J.Biol.Chem., 295, 2020
5UE5
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BU of 5ue5 by Molmil
proMMP-7 with heparin octasaccharide bound to the catalytic domain
Descriptor: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, CALCIUM ION, Matrilysin, ...
Authors:Fulcher, Y.G, Prior, S.H, Linhardt, R.J, Van Doren, S.R.
Deposit date:2016-12-29
Release date:2017-07-19
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Glycan Activation of a Sheddase: Electrostatic Recognition between Heparin and proMMP-7.
Structure, 25, 2017
8V1Q
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BU of 8v1q by Molmil
Herpes simplex virus 1 polymerase holoenzyme bound to DNA in both open/closed conformations
Descriptor: DNA polymerase, DNA polymerase processivity factor, MAGNESIUM ION, ...
Authors:Pan, J, Abraham, J, Coen, D.M, Shankar, S, Yang, P, Hogle, J.
Deposit date:2023-11-21
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Viral DNA polymerase structures reveal mechanisms of antiviral drug resistance.
Cell, 187, 2024
8V1S
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BU of 8v1s by Molmil
Herpes simplex virus 1 polymerase holoenzyme bound to mismatched DNA in editing conformation
Descriptor: DNA polymerase, DNA polymerase processivity factor, MAGNESIUM ION, ...
Authors:Pan, J, Abraham, J, Coen, D.M, Shankar, S, Yang, P, Hogle, J.
Deposit date:2023-11-21
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Viral DNA polymerase structures reveal mechanisms of antiviral drug resistance.
Cell, 187, 2024
5UE2
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BU of 5ue2 by Molmil
proMMP-7 with heparin octasaccharide bridging between domains
Descriptor: 2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose, CALCIUM ION, Matrilysin, ...
Authors:Fulcher, Y.G, Prior, S.H, Linhardt, R.J, Van Doren, S.R.
Deposit date:2016-12-29
Release date:2017-07-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Glycan Activation of a Sheddase: Electrostatic Recognition between Heparin and proMMP-7.
Structure, 25, 2017
8V23
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BU of 8v23 by Molmil
Crystal structure of HIV-1 capsid N-terminal domain in the presence of Lenacapavir
Descriptor: Capsid protein p24
Authors:Briganti, L, Kvaratskhelia, M.
Deposit date:2023-11-21
Release date:2025-01-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:The primary mechanism for highly potent inhibition of HIV-1 maturation by lenacapavir.
Biorxiv, 2024
8V5I
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BU of 8v5i by Molmil
Crystal structure of MAP4K4 in complex with an inhibitor
Descriptor: (3M)-N~6~-(1,4-dimethyl-1H-pyrazol-3-yl)-3-(1-methyl-1H-imidazol-5-yl)-2,7-naphthyridine-1,6-diamine, Mitogen-activated protein kinase kinase kinase kinase 4
Authors:Greasley, S.E, Diehl, W.
Deposit date:2023-11-30
Release date:2025-01-22
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Discovery of Highly Selective Inhibitors of Microtubule-Associated Serine/Threonine Kinase-like (MASTL).
J.Med.Chem., 67, 2024
5JPW
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BU of 5jpw by Molmil
Molecular basis for protein recognition specificity of the DYNLT1/Tctex1 canonical binding groove. Characterization of the interaction with activin receptor IIB
Descriptor: Dynein light chain Tctex-type 1,Cytoplasmic dynein 1 intermediate chain 2
Authors:Rodriguez-Crespo, I, Merino-Gracia, J, Bruix, M, Zamora-Carreras, H.
Deposit date:2016-05-04
Release date:2016-08-17
Last modified:2024-07-03
Method:SOLUTION NMR
Cite:Molecular Basis for the Protein Recognition Specificity of the Dynein Light Chain DYNLT1/Tctex1: CHARACTERIZATION OF THE INTERACTION WITH ACTIVIN RECEPTOR IIB.
J.Biol.Chem., 291, 2016
5W0B
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BU of 5w0b by Molmil
Structure of human TUT7 catalytic module (CM)
Descriptor: IODIDE ION, SULFATE ION, Terminal uridylyltransferase 7, ...
Authors:Faehnle, C.R, Walleshauser, J, Joshua-Tor, L.
Deposit date:2017-05-30
Release date:2017-06-28
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.614 Å)
Cite:Multi-domain utilization by TUT4 and TUT7 in control of let-7 biogenesis.
Nat. Struct. Mol. Biol., 24, 2017
7RMJ
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BU of 7rmj by Molmil
Disulfide stabilized HIV-1 CA hexamer in complex with capsid inhibitor (S)-N-(1-(3-(4-chloro-3-(methylsulfonamido)-1-(2,2,2-trifluoroethyl)-1H-indazol-7-yl)-6-(3-methyl-3-(methylsulfonyl)but-1-yn-1-yl)pyridin-2-yl)-2-(3,5-difluorophenyl)ethyl)-2-(3-(trifluoromethyl)-4,5,6,7-tetrahydro-1H-indazol-1-yl)acetamide
Descriptor: CAPSID PROTEIN P24, CHLORIDE ION, IODIDE ION, ...
Authors:Bester, S.M, Kvaratskhelia, M.
Deposit date:2021-07-27
Release date:2022-08-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.27 Å)
Cite:Structural and Mechanistic Bases of Viral Resistance to HIV-1 Capsid Inhibitor Lenacapavir.
Mbio, 13, 2022
5VX0
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BU of 5vx0 by Molmil
Bak in complex with Bim-h3Glg
Descriptor: 1,2-ETHANEDIOL, Bcl-2 homologous antagonist/killer, Bcl-2-like protein 11, ...
Authors:Brouwer, J.M, Lan, P, Lessene, G, Colman, P.M, Czabotar, P.E.
Deposit date:2017-05-23
Release date:2017-11-15
Last modified:2025-04-02
Method:X-RAY DIFFRACTION (1.599 Å)
Cite:Conversion of Bim-BH3 from Activator to Inhibitor of Bak through Structure-Based Design.
Mol. Cell, 68, 2017
7RMM
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BU of 7rmm by Molmil
Structure of N74D mutant of disulfide stabilized HIV-1 CA hexamer
Descriptor: CAPSID PROTEIN P24, CHLORIDE ION, IODIDE ION
Authors:Bester, S.M, Kvaratskhelia, M.
Deposit date:2021-07-27
Release date:2022-08-03
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Structural and Mechanistic Bases of Viral Resistance to HIV-1 Capsid Inhibitor Lenacapavir.
Mbio, 13, 2022
5VTP
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BU of 5vtp by Molmil
X-ray diffraction data of DNA Polymerase Eta (RAD30) of Saccharomyces cerevisiae with a single magnesium bound in absence of DNA and incoming dNTP
Descriptor: DNA polymerase eta, MAGNESIUM ION
Authors:Powers, K.T, Washington, M.T.
Deposit date:2017-05-17
Release date:2018-01-24
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The C-terminal region of translesion synthesis DNA polymerase eta is partially unstructured and has high conformational flexibility.
Nucleic Acids Res., 46, 2018
5VQ9
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BU of 5vq9 by Molmil
Structure of human TRIP13, Apo form
Descriptor: Pachytene checkpoint protein 2 homolog
Authors:Ye, Q, Corbett, K.D.
Deposit date:2017-05-08
Release date:2017-06-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:The AAA+ ATPase TRIP13 remodels HORMA domains through N-terminal engagement and unfolding.
EMBO J., 36, 2017
5VWW
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BU of 5vww by Molmil
Bak core latch dimer in complex with Bim-RT - Tetragonal
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, BROMIDE ION, Bcl-2 homologous antagonist/killer, ...
Authors:Brouwer, J.M, Colman, P.M, Czabotar, P.E.
Deposit date:2017-05-23
Release date:2017-11-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.802 Å)
Cite:Conversion of Bim-BH3 from Activator to Inhibitor of Bak through Structure-Based Design.
Mol. Cell, 68, 2017

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