Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2KES
DownloadVisualize
BU of 2kes by Molmil
Solution Structure of the Coiled-coil Domain of Synphilin-1
Descriptor: Synphilin-1
Authors:Xie, Y.Y, Zhou, C.J, Zhou, Z.R, Hu, H.Y.
Deposit date:2009-02-02
Release date:2009-02-24
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Interaction with synphilin-1 promotes inclusion formation of alpha-synuclein: mechanistic insights and pathological implication.
Faseb J., 24, 2010
4EDU
DownloadVisualize
BU of 4edu by Molmil
The MBT repeats of human SCML2 in a complex with histone H2A peptide
Descriptor: Histone H2A.J peptide, Sex comb on midleg-like protein 2
Authors:Nady, N, Amaya, M.F, Tempel, W, Ravichandran, M, Arrowsmith, C.H.
Deposit date:2012-03-27
Release date:2012-09-19
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Histone recognition by human malignant brain tumor domains.
J.Mol.Biol., 423, 2012
6TR3
DownloadVisualize
BU of 6tr3 by Molmil
Ruminococcus gnavus GH29 fucosidase E1_10125 in complex with fucose
Descriptor: CALCIUM ION, F5/8 type C domain-containing protein, MAGNESIUM ION, ...
Authors:Owen, C.D, Wu, H, Crost, E, Colvile, A, Juge, N, Walsh, M.A.
Deposit date:2019-12-17
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Fucosidases from the human gut symbiont Ruminococcus gnavus.
Cell.Mol.Life Sci., 78, 2021
1ZLX
DownloadVisualize
BU of 1zlx by Molmil
The apo structure of human glycinamide ribonucleotide transformylase
Descriptor: GLYCEROL, Phosphoribosylglycinamide formyltransferase
Authors:Dahms, T.E, Sainz, G, Giroux, E.L, Caperelli, C.A, Smith, J.L.
Deposit date:2005-05-09
Release date:2005-08-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The apo and ternary complex structures of a chemotherapeutic target: human glycinamide ribonucleotide transformylase.
Biochemistry, 44, 2005
2BIV
DownloadVisualize
BU of 2biv by Molmil
Crystal structure of the wild-type MBT domains of Human SCML2
Descriptor: IODIDE ION, SEX COMB ON MIDLEG-LIKE PROTEIN 2, SODIUM ION
Authors:Santiveri, C.M, Allen, M.D, Sait, F, Bycroft, M.
Deposit date:2005-01-26
Release date:2005-02-08
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The Malignant Brain Tumor Repeats of Human Scml2 Bind to Peptides Containing Monomethylated Lysine.
J.Mol.Biol., 382, 2008
6TR4
DownloadVisualize
BU of 6tr4 by Molmil
Ruminococcus gnavus GH29 fucosidase E1_10125 D221A mutant in complex with fucose
Descriptor: CALCIUM ION, CHLORIDE ION, F5/8 type C domain-containing protein, ...
Authors:Owen, C.D, Wu, H, Crost, E, Colvile, A, Juge, N, Walsh, M.A.
Deposit date:2019-12-17
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Fucosidases from the human gut symbiont Ruminococcus gnavus.
Cell.Mol.Life Sci., 78, 2021
1X7B
DownloadVisualize
BU of 1x7b by Molmil
CRYSTAL STRUCTURE OF ESTROGEN RECEPTOR BETA COMPLEXED WITH ERB-041
Descriptor: 2-(3-FLUORO-4-HYDROXYPHENYL)-7-VINYL-1,3-BENZOXAZOL-5-OL, Estrogen receptor beta, STEROID RECEPTOR COACTIVATOR-1
Authors:Manas, E.S, Unwalla, R.J, Xu, Z.B, Malamas, M.S, Miller, C.P, Harris, H.A, Hsiao, C, Akopian, T, Hum, W.T, Malakian, K, Wolfrom, S, Bapat, A, Bhat, R.A, Stahl, M.L, Somers, W.S, Alvarez, J.C.
Deposit date:2004-08-13
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Based Design of Estrogen Receptor-Beta Selective Ligands
J.Am.Chem.Soc., 126, 2004
1X76
DownloadVisualize
BU of 1x76 by Molmil
CRYSTAL STRUCTURE OF ESTROGEN RECEPTOR BETA COMPLEXED WITH WAY-697
Descriptor: 5-HYDROXY-2-(4-HYDROXYPHENYL)-1-BENZOFURAN-7-CARBONITRILE, Estrogen receptor beta, STEROID RECEPTOR COACTIVATOR-1
Authors:Manas, E.S, Unwalla, R.J, Xu, Z.B, Malamas, M.S, Miller, C.P, Harris, H.A, Hsiao, C, Akopian, T, Hum, W.T, Malakian, K, Wolfrom, S, Bapat, A, Bhat, R.A, Stahl, M.L, Somers, W.S, Alvarez, J.C.
Deposit date:2004-08-13
Release date:2005-03-01
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-Based Design of Estrogen Receptor-Beta Selective Ligands
J.Am.Chem.Soc., 126, 2004
4LO8
DownloadVisualize
BU of 4lo8 by Molmil
HA70(D3)-HA17
Descriptor: HA-17, HA-70
Authors:Lee, K, Gu, S, Jin, L, Le, T.T, Cheng, L.W, Strotmeier, J, Kruel, A.M, Yao, G, Perry, K, Rummel, A, Jin, R.
Deposit date:2013-07-12
Release date:2013-10-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a Bimodular Botulinum Neurotoxin Complex Provides Insights into Its Oral Toxicity.
Plos Pathog., 9, 2013
4LSG
DownloadVisualize
BU of 4lsg by Molmil
Structure of Mouse P-Glycoprotein
Descriptor: MERCURY (II) ION, Multidrug resistance protein 1A
Authors:Chang, G, Szewczyk, P.
Deposit date:2013-07-22
Release date:2013-07-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:

7LOU
DownloadVisualize
BU of 7lou by Molmil
Crystal structure of Clostridium difficile Toxin B (TcdB) glucosyltransferase in complex with UDP and isofagomine
Descriptor: 1,2-ETHANEDIOL, 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE, Glucosyltransferase TcdB, ...
Authors:Harijan, R.K, Paparella, A.S, Aboulache, B.L, Bonanno, J.B, Almo, S.C, Schramm, V.L.
Deposit date:2021-02-10
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Inhibition of Clostridium difficile TcdA and TcdB toxins with transition state analogues.
Nat Commun, 12, 2021
7LOV
DownloadVisualize
BU of 7lov by Molmil
Crystal structure of Clostridium difficile Toxin B (TcdB) glucosyltransferase in complex with UDP and noeuromycin
Descriptor: (2R,3S,4R,5R)-5-(HYDROXYMETHYL)PIPERIDINE-2,3,4-TRIOL, GLYCEROL, MANGANESE (II) ION, ...
Authors:Harijan, R.K, Paparella, A.S, Aboulache, B.L, Bonanno, J.B, Almo, S.C, Schramm, V.L.
Deposit date:2021-02-10
Release date:2021-11-17
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Inhibition of Clostridium difficile TcdA and TcdB toxins with transition state analogues.
Nat Commun, 12, 2021
2E7O
DownloadVisualize
BU of 2e7o by Molmil
Solution structure of the Bromodomain from human Bromodomain adjacent to zinc finger domain 2B
Descriptor: Bromodomain adjacent to zinc finger domain 2B
Authors:Qin, X.R, Kurosaki, C, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-01-11
Release date:2007-07-17
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the Bromodomain from human Bromodomain adjacent to zinc finger domain 2B
to be published
7LXF
DownloadVisualize
BU of 7lxf by Molmil
ENAH EVH1 domain bound to peptide from protein PCARE
Descriptor: Protein enabled homolog,Photoreceptor cilium actin regulator
Authors:Hwang, T, Grant, R.A, Keating, A.E.
Deposit date:2021-03-03
Release date:2021-11-24
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:A distributed residue network permits conformational binding specificity in a conserved family of actin remodelers.
Elife, 10, 2021
2E61
DownloadVisualize
BU of 2e61 by Molmil
Solution structure of the zf-CW domain in zinc finger CW-type PWWP domain protein 1
Descriptor: ZINC ION, Zinc finger CW-type PWWP domain protein 1
Authors:He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-12-25
Release date:2007-06-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structural insight into the zinc finger CW domain as a histone modification reader
Structure, 18, 2010
4GQG
DownloadVisualize
BU of 4gqg by Molmil
Crystal structure of AKR1B10 complexed with NADP+
Descriptor: Aldo-keto reductase family 1 member B10, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Zhang, L, Zheng, X, Chen, S, Zhai, J, Hu, X.
Deposit date:2012-08-23
Release date:2013-08-28
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Inhibitor selectivity between aldo-keto reductase superfamily members AKR1B10 and AKR1B1: Role of Trp112 (Trp111)
Febs Lett., 587, 2013
7LYX
DownloadVisualize
BU of 7lyx by Molmil
Crystal structure of human CYP8B1 in complex with (S)-tioconazole
Descriptor: (S)-Tioconazole, 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase, GLYCEROL, ...
Authors:Liu, J, Scott, E.E.
Deposit date:2021-03-08
Release date:2022-08-17
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The structure and characterization of human cytochrome P450 8B1 supports future drug design for nonalcoholic fatty liver disease and diabetes.
J.Biol.Chem., 298, 2022
5EI2
DownloadVisualize
BU of 5ei2 by Molmil
Rapid Discovery of Pyrido[3,4-d]pyrimidine Inhibitors of Monopolar Spindle kinase 1 (MPS1) Using a Structure-Based Hydridization Approach
Descriptor: Dual specificity protein kinase TTK, ~{N}-(2,4-dimethoxyphenyl)-8-(1-methylpyrazol-4-yl)pyrido[3,4-d]pyrimidin-2-amine
Authors:Innocenti, P, Woodward, H.L, Solanki, S, Naud, N, Westwood, I.M, Cronin, N, Hayes, A, Roberts, J, Henley, A.T, Baker, R, Faisal, A, Mak, G, Box, G, Valenti, M, De Haven Brandon, A, O'Fee, L, Saville, J, Schmitt, J, Burke, R, van Montfort, R.L.M, Raymaud, F.I, Eccles, S.A, Linardopoulos, S, Blagg, J, Hoelder, S.
Deposit date:2015-10-29
Release date:2016-04-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Rapid Discovery of Pyrido[3,4-d]pyrimidine Inhibitors of Monopolar Spindle Kinase 1 (MPS1) Using a Structure-Based Hybridization Approach.
J.Med.Chem., 59, 2016
5EE5
DownloadVisualize
BU of 5ee5 by Molmil
Structure of human ARL1 in complex with the DCB domain of BIG1
Descriptor: ACETATE ION, ADP-ribosylation factor-like protein 1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, ...
Authors:Galindo, A, Soler, N, Munro, S.
Deposit date:2015-10-22
Release date:2016-07-06
Last modified:2016-07-27
Method:X-RAY DIFFRACTION (2.279 Å)
Cite:Structural Insights into Arl1-Mediated Targeting of the Arf-GEF BIG1 to the trans-Golgi.
Cell Rep, 16, 2016
6T2N
DownloadVisualize
BU of 6t2n by Molmil
Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown
Descriptor: CALCIUM ION, Glycoside hydrolase family 16 protein
Authors:Crouch, L.I, Liberato, M.V, Ubranowicz, P.A, Basle, A, Lamb, C.A, Cooke, K, Doona, M, Needham, S, Brady, R.R, Berrington, J.E, Madubic, K, Chater, P, Zhang, F, Linhardt, R.J, Spence, D.I.R, Bolam, D.N.
Deposit date:2019-10-09
Release date:2020-07-08
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Prominent members of the human gut microbiota express endo-acting O-glycanases to initiate mucin breakdown.
Nat Commun, 11, 2020
4JKL
DownloadVisualize
BU of 4jkl by Molmil
Crystal Structure of Streptococcus agalactiae beta-glucuronidase in space group P21212
Descriptor: Beta-glucuronidase, MAGNESIUM ION
Authors:Wallace, B.D, Redinbo, M.R.
Deposit date:2013-03-09
Release date:2014-09-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.288 Å)
Cite:Structure and Inhibition of Microbiome beta-Glucuronidases Essential to the Alleviation of Cancer Drug Toxicity.
Chem.Biol., 22, 2015
4EXT
DownloadVisualize
BU of 4ext by Molmil
Structure of polymerase-interacting domain of human Rev1 in complex with translesional synthesis polymerase zeta
Descriptor: DNA repair protein REV1, Mitotic spindle assembly checkpoint protein MAD2B, peptide from DNA polymerase zeta catalytic subunit
Authors:Liu, D.N, Ryu, K.S, Ko, J.S, Choi, B.S.
Deposit date:2012-05-01
Release date:2013-05-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Insights into the scaffold mechanism of human Rev1 in translesional synthesis revealed by structural studies on its polymerase-interacting domain
To be Published
2O23
DownloadVisualize
BU of 2o23 by Molmil
The structure of wild-type human HADH2 (17beta-hydroxysteroid dehydrogenase type 10) bound to NAD+ at 1.2 A
Descriptor: GLYCEROL, HADH2 protein, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Kavanagh, K.L, Shafqat, N, Scholer, K, Debreczeni, J, Zschocke, J, von Delft, F, Weigelt, J, Arrowsmith, C, Sundstrom, M, Edwards, A, Oppermann, U, Structural Genomics Consortium (SGC)
Deposit date:2006-11-29
Release date:2006-12-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The structure of wild-type human HADH2 (17beta-hydroxysteroid dehydrogenase type 10) bound to NAD+ at 1.2 A
To be Published
1Y02
DownloadVisualize
BU of 1y02 by Molmil
Crystal Structure of a FYVE-type domain from caspase regulator CARP2
Descriptor: FYVE-RING finger protein SAKURA, ZINC ION
Authors:Tibbetts, M.D, Gu, L, Shiozaki, E.N, Shi, Y.
Deposit date:2004-11-14
Release date:2004-12-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of a FYVE-type zinc finger domain from the caspase regulator CARP2.
STRUCTURE, 12, 2004
1XR0
DownloadVisualize
BU of 1xr0 by Molmil
Structural Basis of SNT PTB Domain Interactions with Distinct Neurotrophic Receptors
Descriptor: Basic fibroblast growth factor receptor 1, FGFR signalling adaptor SNT-1
Authors:Dhalluin, C, Yan, K.S, Plotnikova, O, Lee, K.W, Zeng, L, Kuti, M, Mujtaba, S, Goldfarb, M.P, Zhou, M.-M.
Deposit date:2004-10-13
Release date:2004-11-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structural Basis of SNT PTB Domain Interactions with Distinct Neurotrophic Receptors
Mol.Cell, 6, 2000

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon