Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6TCR
DownloadVisualize
BU of 6tcr by Molmil
Crystal structure of the omalizumab Fab Ser81Arg, Gln83Arg and Leu158Pro light chain mutant
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Omalizumab Fab Ser81Arg, ...
Authors:Mitropoulou, A.N, Ceska, T, Beavil, A.J, Henry, A.J, McDonnell, J.M, Sutton, B.J, Davies, A.M.
Deposit date:2019-11-06
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Engineering the Fab fragment of the anti-IgE omalizumab to prevent Fab crystallization and permit IgE-Fc complex crystallization.
Acta Crystallogr.,Sect.F, 76, 2020
6TCO
DownloadVisualize
BU of 6tco by Molmil
Crystal structure of the omalizumab Fab Leu158Pro light chain mutant - crystal form I
Descriptor: 1,2-ETHANEDIOL, Omalizumab Fab Leu158Pro light chain mutant, SULFATE ION
Authors:Mitropoulou, A.N, Ceska, T, Beavil, A.J, Henry, A.J, McDonnell, J.M, Sutton, B.J, Davies, A.M.
Deposit date:2019-11-06
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Engineering the Fab fragment of the anti-IgE omalizumab to prevent Fab crystallization and permit IgE-Fc complex crystallization.
Acta Crystallogr.,Sect.F, 76, 2020
6SV2
DownloadVisualize
BU of 6sv2 by Molmil
Human prion protein (PrP) fragment 119-231 (G127V M129 variant) complexed to ICSM 18 (anti-Prp therapeutic antibody) Fab fragment
Descriptor: ICSM 18-ANTI-PRP THERAPEUTIC FAB HEAVY CHAIN, ICSM 18-ANTI-PRP THERAPEUTIC FAB LIGHT CHAIN, Major prion protein, ...
Authors:Conners, R.
Deposit date:2019-09-17
Release date:2020-07-29
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural effects of the highly protective V127 polymorphism on human prion protein.
Commun Biol, 3, 2020
6SUZ
DownloadVisualize
BU of 6suz by Molmil
Human prion protein (PrP) fragment 119-231 (G127V V129 variant) complexed to ICSM 18 (anti-Prp therapeutic antibody) Fab fragment
Descriptor: ICSM 18-ANTI-PRP THERAPEUTIC FAB HEAVY CHAIN, ICSM 18-ANTI-PRP THERAPEUTIC FAB LIGHT CHAIN, Major prion protein, ...
Authors:Conners, R.
Deposit date:2019-09-17
Release date:2020-08-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural effects of the highly protective V127 polymorphism on human prion protein.
Commun Biol, 3, 2020
6TCM
DownloadVisualize
BU of 6tcm by Molmil
Crystal structure of the omalizumab Fab - crystal form I
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, Omalizumab Fab, ...
Authors:Mitropoulou, A.N, Ceska, T, Beavil, A.J, Henry, A.J, McDonnell, J.M, Sutton, B.J, Davies, A.M.
Deposit date:2019-11-06
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Engineering the Fab fragment of the anti-IgE omalizumab to prevent Fab crystallization and permit IgE-Fc complex crystallization.
Acta Crystallogr.,Sect.F, 76, 2020
6TCS
DownloadVisualize
BU of 6tcs by Molmil
Crystal structure of the omalizumab scFv
Descriptor: DI(HYDROXYETHYL)ETHER, Omalizumab scFv
Authors:Mitropoulou, A.N, Ceska, T, Beavil, A.J, Henry, A.J, McDonnell, J.M, Sutton, B.J, Davies, A.M.
Deposit date:2019-11-06
Release date:2020-03-18
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Engineering the Fab fragment of the anti-IgE omalizumab to prevent Fab crystallization and permit IgE-Fc complex crystallization.
Acta Crystallogr.,Sect.F, 76, 2020
7FIG
DownloadVisualize
BU of 7fig by Molmil
luteinizing hormone/choriogonadotropin receptor(S277I)-chorionic gonadotropin-Gs complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Camelid antibody VHH fragment Nb35, Choriogonadotropin subunit beta 3, ...
Authors:Duan, J, Xu, P, Cheng, X, Mao, C, Croll, T, He, X, Shi, J, Luan, X, Yin, W, You, E, Liu, Q, Zhang, S, Jiang, H, Zhang, Y, Jiang, Y, Xu, H.E.
Deposit date:2021-07-31
Release date:2021-09-29
Last modified:2022-02-16
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structures of full-length glycoprotein hormone receptor signalling complexes.
Nature, 598, 2021
7F5G
DownloadVisualize
BU of 7f5g by Molmil
The crystal structure of RBD-Nanobody complex, DL4 (SA4)
Descriptor: ACETATE ION, GLYCEROL, Nanobody DL4, ...
Authors:Li, T, Lai, Y, Zhou, Y, Tan, J, Li, D.
Deposit date:2021-06-22
Release date:2022-05-25
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Isolation, characterization, and structure-based engineering of a neutralizing nanobody against SARS-CoV-2.
Int.J.Biol.Macromol., 209, 2022
6TCQ
DownloadVisualize
BU of 6tcq by Molmil
Crystal structure of the omalizumab Fab Ser81Arg and Gln83Arg light chain mutant
Descriptor: GLYCEROL, Omalizumab Fab Ser81Arg and Gln83Arg light chain mutant
Authors:Mitropoulou, A.N, Ceska, T, Beavil, A.J, Henry, A.J, McDonnell, J.M, Sutton, B.J, Davies, A.M.
Deposit date:2019-11-06
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Engineering the Fab fragment of the anti-IgE omalizumab to prevent Fab crystallization and permit IgE-Fc complex crystallization.
Acta Crystallogr.,Sect.F, 76, 2020
6TCN
DownloadVisualize
BU of 6tcn by Molmil
Crystal structure of the omalizumab Fab - crystal form II
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
Authors:Mitropoulou, A.N, Ceska, T, Beavil, A.J, Henry, A.J, McDonnell, J.M, Sutton, B.J, Davies, A.M.
Deposit date:2019-11-06
Release date:2020-03-18
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Engineering the Fab fragment of the anti-IgE omalizumab to prevent Fab crystallization and permit IgE-Fc complex crystallization.
Acta Crystallogr.,Sect.F, 76, 2020
8TEA
DownloadVisualize
BU of 8tea by Molmil
HCMV Pentamer in complex with CS2pt1p2_A10L Fab and CS3pt1p4_C1L Fab
Descriptor: CS2pt1p2_A10L Fab heavy chain, CS2pt1p2_A10L Fab light chain, CS3pt1p4_C1L Fab heavy chain, ...
Authors:Goldsmith, J.A, McLellan, J.S.
Deposit date:2023-07-05
Release date:2023-08-09
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Single-cell analysis of memory B cells from top neutralizers reveals multiple sites of vulnerability within HCMV Trimer and Pentamer.
Immunity, 56, 2023
7DQ7
DownloadVisualize
BU of 7dq7 by Molmil
Cryo-EM structure of Coxsackievirus B1 mature virion in complex with nAb 5F5
Descriptor: 5F5 VH, 5F5 VL, Capsid protein VP4, ...
Authors:Li, S, Zhu, R, Xu, L, Cheng, T, Zheng, Q.
Deposit date:2020-12-22
Release date:2021-05-05
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures reveal the molecular basis of receptor-initiated coxsackievirus uncoating.
Cell Host Microbe, 29, 2021
6ZLR
DownloadVisualize
BU of 6zlr by Molmil
Soaking competent crystal form of the SARS-CoV-2 Receptor Binding Domain (RBD):CR3022 complex.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CR3022 FAB HEAVY CHAIN, CR3022 FAB LIGHT CHAIN, ...
Authors:de Nicola, G.F, Nichols, C.E.
Deposit date:2020-07-01
Release date:2020-12-23
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A New Crystal Form of the SARS-CoV-2 Receptor Binding Domain: CR3022 Complex-An Ideal Target for In-Crystal Fragment Screening of the ACE2 Binding Site Surface.
Front Pharmacol, 11, 2020
8YN6
DownloadVisualize
BU of 8yn6 by Molmil
Cryo-EM structure of histamine H3 receptor in complex with imetit and Gi
Descriptor: 2-(1~{H}-imidazol-5-yl)ethyl carbamimidothioate, Antibody fragment scFv16, CHOLESTEROL, ...
Authors:Zhang, X, Liu, G, Li, X, Gong, W.
Deposit date:2024-03-10
Release date:2024-10-09
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:Structural basis of ligand recognition and activation of the histamine receptor family
Nat Commun, 15, 2024
1MVF
DownloadVisualize
BU of 1mvf by Molmil
MazE addiction antidote
Descriptor: PemI-like protein 1, immunoglobulin heavy chain variable region
Authors:Loris, R, Marianovsky, I, Lah, J, Laeremans, T, Engelberg-Kulka, H, Glaser, G, Muyldermans, S, Wyns, L.
Deposit date:2002-09-25
Release date:2003-06-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the intrinsically flexible addiction antidote MazE.
J.Biol.Chem., 278, 2003
8U4Q
DownloadVisualize
BU of 8u4q by Molmil
Structure of REGN7663 Fab-bound CXCR4/Gi complex
Descriptor: C-X-C chemokine receptor type 4, CHOLESTEROL, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Saotome, K, McGoldrick, L.L, Franklin, M.C.
Deposit date:2023-09-11
Release date:2024-03-13
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structural insights into CXCR4 modulation and oligomerization.
Nat.Struct.Mol.Biol., 2024
8U4T
DownloadVisualize
BU of 8u4t by Molmil
Structure of tetrameric CXCR4 in complex with REGN7663 Fab
Descriptor: (2R)-1-(hexadecanoyloxy)-3-(phosphonooxy)propan-2-yl (9Z)-octadec-9-enoate, C-X-C chemokine receptor type 4, CHOLESTEROL, ...
Authors:Saotome, K, McGoldrick, L.L, Franklin, M.C.
Deposit date:2023-09-11
Release date:2024-03-13
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural insights into CXCR4 modulation and oligomerization.
Nat.Struct.Mol.Biol., 2024
8U4S
DownloadVisualize
BU of 8u4s by Molmil
Structure of trimeric CXCR4 in complex with REGN7663 Fab
Descriptor: (2R)-1-(hexadecanoyloxy)-3-(phosphonooxy)propan-2-yl (9Z)-octadec-9-enoate, C-X-C chemokine receptor type 4, CHOLESTEROL, ...
Authors:Saotome, K, McGoldrick, L.L, Franklin, M.C.
Deposit date:2023-09-11
Release date:2024-03-13
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Structural insights into CXCR4 modulation and oligomerization.
Nat.Struct.Mol.Biol., 2024
8U4R
DownloadVisualize
BU of 8u4r by Molmil
Structure of REGN7663-Fab bound CXCR4
Descriptor: C-X-C chemokine receptor type 4, CHOLESTEROL, REGN7663 Fab heavy chain, ...
Authors:Saotome, K, McGoldrick, L.L, Franklin, M.C.
Deposit date:2023-09-11
Release date:2024-03-13
Last modified:2024-10-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into CXCR4 modulation and oligomerization.
Nat.Struct.Mol.Biol., 2024
2CK0
DownloadVisualize
BU of 2ck0 by Molmil
ANTI-ANTI-IDIOTYPIC ANTIBODY AGAINST HUMAN ANGIOTENSIN II, COMPLEX WITH A SYNTHETIC CYCLIC PEPTIDE
Descriptor: PROTEIN (11-MER; CYCLIC PEPTIDE), PROTEIN (IMMUNOGLOBULIN; HEAVY CHAIN), PROTEIN (IMMUNOGLOBULIN; LIGHT CHAIN)
Authors:Pan, Y.H, Amzel, L.M.
Deposit date:1999-06-13
Release date:2003-08-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of Angiotensin II and a Phage-Display Selected Cyclic Peptide in Complex with Fab131: Making Angiotensin II Analogs
To be Published
1BEV
DownloadVisualize
BU of 1bev by Molmil
BOVINE ENTEROVIRUS VG-5-27
Descriptor: BOVINE ENTEROVIRUS COAT PROTEINS VP1 TO VP4, MYRISTIC ACID, SULFATE ION
Authors:Smyth, M, Tate, J, Lyons, C, Hoey, E, Martin, S, Stuart, D.
Deposit date:1996-04-03
Release date:1998-09-16
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Implications for viral uncoating from the structure of bovine enterovirus.
Nat.Struct.Biol., 2, 1995
7KNA
DownloadVisualize
BU of 7kna by Molmil
Localized reconstruction of the H1 A/Michigan/45/2015 ectodomain displayed at the surface of I53_dn5 nanoparticle
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin,I53_dn5
Authors:Acton, O.J, Park, Y.J, Veesler, D, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
Deposit date:2020-11-04
Release date:2021-03-31
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Quadrivalent influenza nanoparticle vaccines induce broad protection.
Nature, 592, 2021
8YNA
DownloadVisualize
BU of 8yna by Molmil
Cryo-EM structure of histamine H4 receptor in complex with immepip and Gi
Descriptor: 4-(1H-imidazol-5-ylmethyl)piperidine, Antibody fragment scFv16, CHOLESTEROL, ...
Authors:Zhang, X, Liu, G, Li, X, Gong, W.
Deposit date:2024-03-10
Release date:2024-10-09
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:Structural basis of ligand recognition and activation of the histamine receptor family
Nat Commun, 15, 2024
7BU7
DownloadVisualize
BU of 7bu7 by Molmil
Structure of human beta1 adrenergic receptor bound to BI-167107 and nanobody 6B9
Descriptor: (2S)-2,3-dihydroxypropyl (7Z)-tetradec-7-enoate, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 8-[(1R)-2-{[1,1-dimethyl-2-(2-methylphenyl)ethyl]amino}-1-hydroxyethyl]-5-hydroxy-2H-1,4-benzoxazin-3(4H)-one, ...
Authors:Xu, X, Kaindl, J, Clark, M, Hubner, H, Hirata, K, Sunahara, R, Gmeiner, P, Kobilka, B.K, Liu, X.
Deposit date:2020-04-04
Release date:2020-12-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Binding pathway determines norepinephrine selectivity for the human beta 1 AR over beta 2 AR.
Cell Res., 31, 2021
7BU6
DownloadVisualize
BU of 7bu6 by Molmil
Structure of human beta1 adrenergic receptor bound to norepinephrine and nanobody 6B9
Descriptor: (2S)-2,3-dihydroxypropyl octanoate, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHOLESTEROL, ...
Authors:Xu, X, Kaindl, J, Clark, M, Hubner, H, Hirata, K, Sunahara, R, Gmeiner, P, Kobilka, B.K, Liu, X.
Deposit date:2020-04-04
Release date:2020-12-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Binding pathway determines norepinephrine selectivity for the human beta 1 AR over beta 2 AR.
Cell Res., 31, 2021

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon