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5OEW
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BU of 5oew by Molmil
Crystal structure of the GluA2 ligand-binding domain (S1S2J) in complex with glutamate and positive allosteric modulator BPAM538
Descriptor: 4-cyclopropyl-7-(3-methoxyphenoxy)-2,3-dihydro-1$l^{6},2,4-benzothiadiazine 1,1-dioxide, ACETATE ION, GLUTAMIC ACID, ...
Authors:Larsen, A.P, Frydenvang, K.A, Kastrup, J.S.
Deposit date:2017-07-10
Release date:2018-01-03
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:7-Phenoxy-Substituted 3,4-Dihydro-2H-1,2,4-benzothiadiazine 1,1-Dioxides as Positive Allosteric Modulators of alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic Acid (AMPA) Receptors with Nanomolar Potency.
J. Med. Chem., 61, 2018
5NZO
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BU of 5nzo by Molmil
Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with 1-methyl-3-phenyl-1H-pyrazol-5-amine
Descriptor: 2-methyl-5-phenyl-pyrazol-3-amine, D-3-phosphoglycerate dehydrogenase
Authors:Unterlass, J.E, Basle, A, Blackburn, T.J, Tucker, J, Cano, C, Noble, M.E.M, Curtin, N.J.
Deposit date:2017-05-14
Release date:2017-06-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.29 Å)
Cite:Validating and enabling phosphoglycerate dehydrogenase (PHGDH) as a target for fragment-based drug discovery in PHGDH-amplified breast cancer.
Oncotarget, 9, 2018
2NQG
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BU of 2nqg by Molmil
Calpain 1 proteolytic core inactivated by WR18(S,S), an epoxysuccinyl-type inhibitor.
Descriptor: 5-AZANYLIDYNE-N-[(2S)-4-ETHOXY-2-HYDROXY-4-OXOBUTANOYL]-L-NORVALYL-L-ARGINYL-L-TRYPTOPHANAMIDE, CALCIUM ION, Calpain-1 catalytic subunit
Authors:Cuerrier, D, Davies, P.L, Campbell, R.L, Moldoveanu, T.
Deposit date:2006-10-31
Release date:2007-01-09
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Development of Calpain-specific Inactivators by Screening of Positional Scanning Epoxide Libraries
J.Biol.Chem., 282, 2007
6CIV
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BU of 6civ by Molmil
Lactam cyclised mimetic of a fragment of p21
Descriptor: p21
Authors:Wegener, K.L.
Deposit date:2018-02-25
Release date:2018-07-04
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Rational Design of a 310-Helical PIP-Box Mimetic Targeting PCNA, the Human Sliding Clamp.
Chemistry, 24, 2018
5OHQ
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BU of 5ohq by Molmil
Crystal structure of the KOW6-KOW7 domain of human DSIF
Descriptor: CHLORIDE ION, SODIUM ION, Transcription elongation factor SPT5
Authors:Bernecky, C, Plitzko, J.M, Cramer, P.
Deposit date:2017-07-17
Release date:2017-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.098 Å)
Cite:Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp.
Nat. Struct. Mol. Biol., 24, 2017
2JSJ
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BU of 2jsj by Molmil
Obestatin in water solution
Descriptor: Appetite-regulating hormone, Obestatin
Authors:D'Ursi, A.M, Scrima, M, Esposito, C, Campiglia, P.
Deposit date:2007-07-05
Release date:2008-10-21
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Obestatin conformational features: a strategy to unveil obestatin's biological role?
Biochem.Biophys.Res.Commun., 363, 2007
6BNX
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BU of 6bnx by Molmil
Crystal structure of V278E-glyoxalase I mutant from Zea mays in space group P6(3)
Descriptor: COBALT (II) ION, Lactoylglutathione lyase
Authors:Alvarez, C.E, Agostini, R.B, Gonzalez, J.M, Drincovich, M.F, Campos Bermudez, V.A, Klinke, S.
Deposit date:2017-11-17
Release date:2018-11-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Deciphering the number and location of active sites in the monomeric glyoxalase I of Zea mays.
Febs J., 286, 2019
5OFW
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BU of 5ofw by Molmil
Crystal structure of human 3-phosphoglycerate dehydrogenase in complex with 3-Chloro-4-fluorobenzamide
Descriptor: 3-chloranyl-4-fluoranyl-benzamide, D-3-phosphoglycerate dehydrogenase
Authors:Unterlass, J.E, Basle, A, Blackburn, T.J, Tucker, J, Cano, C, Noble, M.E.M, Curtin, N.J.
Deposit date:2017-07-11
Release date:2017-08-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Validating and enabling phosphoglycerate dehydrogenase (PHGDH) as a target for fragment-based drug discovery in PHGDH-amplified breast cancer.
Oncotarget, 9, 2018
2K0T
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BU of 2k0t by Molmil
High Resolution Solution NMR Structures of Oxaliplatin-DNA Adduct
Descriptor: CYCLOHEXANE-1(R),2(R)-DIAMINE-PLATINUM(II), DNA (5'-D(*DCP*DCP*DTP*DCP*DTP*DGP*DGP*DTP*DCP*DTP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DAP*DGP*DAP*DCP*DCP*DAP*DGP*DAP*DGP*DG)-3')
Authors:Bhattacharyya, D, King, C.L, Chaney, S.G, Campbell, S.L.
Deposit date:2008-02-14
Release date:2009-02-03
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Flanking Bases Influence the Nature of DNA Distortion by Platinum 1,2-Intrastrand (GG) Cross-Links.
Plos One, 6, 2011
5OHO
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BU of 5oho by Molmil
Crystal structure of the KOWx-KOW4 domain of human DSIF
Descriptor: CHLORIDE ION, GLYCEROL, Transcription elongation factor SPT5
Authors:Bernecky, C, Plitzko, J.M, Cramer, P.
Deposit date:2017-07-17
Release date:2017-09-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.601 Å)
Cite:Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp.
Nat. Struct. Mol. Biol., 24, 2017
6CU0
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BU of 6cu0 by Molmil
Crystal structure of 4-1BBL/4-1BB (C121S) complex in P21 space group
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Tumor necrosis factor ligand superfamily member 9, Tumor necrosis factor receptor superfamily member 9
Authors:Aruna, B, Zajonc, D.M, Doukov, T.
Deposit date:2018-03-23
Release date:2018-05-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of the human 4-1BB receptor bound to its ligand 4-1BBL reveal covalent receptor dimerization as a potential signaling amplifier.
J. Biol. Chem., 293, 2018
2KOL
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BU of 2kol by Molmil
Solution structure of human SDF1-alpha H25R
Descriptor: Stromal cell-derived factor 1
Authors:Volkman, B.F, Ziarek, J.J, Peterson, F.C, Veldkamp, C.T.
Deposit date:2009-09-24
Release date:2010-10-06
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Solution structure of human SDF1-alpha H25R
To be Published
2LRX
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BU of 2lrx by Molmil
RNA structural dynamics are modulated through anti-folding by chaperones
Descriptor: DNA-binding protein stpA
Authors:Fuertig, B, Doetsch, M, Stampfl, S, Kontaxis, G, Schroeder, R.
Deposit date:2012-04-15
Release date:2013-04-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Chaperones modulate RNA structural dynamics through anti-folding
To be Published
2LJT
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BU of 2ljt by Molmil
C9L,C14L-LeuA
Descriptor: Bacteriocin leucocin-A
Authors:Sit, C.S, Lohans, C.T, van Belkum, M.J, Campbell, C.D, Miskolzie, M, Vederas, J.C.
Deposit date:2011-09-23
Release date:2012-01-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Substitution of a Conserved Disulfide in the Type IIa Bacteriocin, Leucocin A, with L-Leucine and L-Serine Residues: Effects on Activity and Three-Dimensional Structure.
Chembiochem, 13, 2012
2M41
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BU of 2m41 by Molmil
Solution Structure of the AXH domain of Ataxin-1 in complex with ligand peptide from Capicua
Descriptor: Ataxin-1, Protein capicua homolog
Authors:de Chiara, C, Kelly, G, Pastore, A.
Deposit date:2013-01-28
Release date:2013-12-11
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Protein-Protein Interactions as a Strategy towards Protein-Specific Drug Design: The Example of Ataxin-1.
Plos One, 8, 2013
3QSB
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BU of 3qsb by Molmil
Structure of E. coli polIIIbeta with (Z)-5-(1-((4'-Fluorobiphenyl-4-yl)methoxyimino)butyl)-2,2-dimethyl-4,6-dioxocyclohexanecarbonitrile
Descriptor: (1R,5R)-5-{(1Z)-N-[(4'-fluorobiphenyl-4-yl)methoxy]butanimidoyl}-2,2-dimethyl-4,6-dioxocyclohexanecarbonitrile, DNA polymerase III subunit beta
Authors:Wijffels, G, Johnson, W.M, Oakley, A.J, Turner, K, Epa, V.C, Briscoe, S.J, Polley, M, Liepa, A.J, Hofmann, A, Buchardt, J, Christensen, C, Prosselkov, P, Dalrymple, B.P, Alewood, P.F, Jennings, P.A, Dixon, N.E, Winkler, D.A.
Deposit date:2011-02-20
Release date:2011-06-08
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Binding inhibitors of the bacterial sliding clamp by design
J.Med.Chem., 54, 2011
2KDR
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BU of 2kdr by Molmil
Solution structure of HCV NS4B(227-254)
Descriptor: Non-structural protein 4B
Authors:Montserret, R, Penin, F.
Deposit date:2009-01-15
Release date:2009-09-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An amphipathic alpha-helix at the C terminus of hepatitis C virus nonstructural protein 4B mediates membrane association
J.Virol., 83, 2009
2KI5
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BU of 2ki5 by Molmil
HERPES SIMPLEX TYPE-1 THYMIDINE KINASE IN COMPLEX WITH THE DRUG ACICLOVIR AT 1.9A RESOLUTION
Descriptor: 9-HYROXYETHOXYMETHYLGUANINE, PROTEIN (THYMIDINE KINASE), SULFATE ION
Authors:Bennett, M.S, Wien, F, Champness, J.N, Batuwangala, T, Rutherford, T, Summers, W.C, Sun, H, Wright, G, Sanderson, M.R.
Deposit date:1999-02-12
Release date:1999-03-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure to 1.9 A resolution of a complex with herpes simplex virus type-1 thymidine kinase of a novel, non-substrate inhibitor: X-ray crystallographic comparison with binding of aciclovir.
FEBS Lett., 443, 1999
2KJC
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BU of 2kjc by Molmil
Solution structure of CzrA in the Zn(II) state
Descriptor: CzrA protein
Authors:Arunkumar, A.I, Campanello, G.C, Giedroc, D.P.
Deposit date:2009-05-27
Release date:2009-11-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of a paradigm ArsR family zinc sensor in the DNA-bound state
Proc.Natl.Acad.Sci.USA, 106, 2009
3S45
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BU of 3s45 by Molmil
wild-type HIV-2 protease with antiviral drug amprenavir
Descriptor: CHLORIDE ION, IMIDAZOLE, Protease, ...
Authors:Tie, Y.-F, Wang, Y.-F, Weber, I.T.
Deposit date:2011-05-18
Release date:2012-03-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Critical differences in HIV-1 and HIV-2 protease specificity for clinical inhibitors.
Protein Sci., 21, 2012
2LAU
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BU of 2lau by Molmil
Solution structure of the THAP-zinc finger domain 1-81 from the cell growth suppressor human THAP11 protein
Descriptor: THAP domain-containing protein 11, ZINC ION
Authors:Durand, J, Campagne, S, Milon, A, Gervais, V.
Deposit date:2011-03-21
Release date:2012-09-26
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the THAP domain from the cell growth suppressor human THAP11
To be Published
2LQR
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BU of 2lqr by Molmil
NMR structure of Ig3 domain of palladin
Descriptor: Palladin
Authors:Beck, M.R, Dixon IV, R.D.S, Otey, C.A, Campbell, S.L, Murphy, G.S.
Deposit date:2012-03-13
Release date:2013-01-23
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure and Function of Palladin's Actin Binding Domain.
J.Mol.Biol., 425, 2013
2LJQ
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BU of 2ljq by Molmil
(C9S, C14S)-leucocin A
Descriptor: Bacteriocin leucocin-A
Authors:Sit, C.S, Lohans, C.T, van Belkum, M.J, Campbell, C.D, Miskolzie, M, Vederas, J.C.
Deposit date:2011-09-22
Release date:2012-01-18
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Substitution of a Conserved Disulfide in the Type IIa Bacteriocin, Leucocin A, with L-Leucine and L-Serine Residues: Effects on Activity and Three-Dimensional Structure.
Chembiochem, 13, 2012
2N55
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BU of 2n55 by Molmil
Structure of constitutively monomeric CXCL12 in complex with the CXCR4 N-terminus
Descriptor: C-X-C chemokine receptor type 4, Stromal cell-derived factor 1
Authors:Ziarek, J.J, Peterson, F.C, Volkman, B.F.
Deposit date:2015-07-07
Release date:2016-04-27
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Structural basis for chemokine recognition by a G protein-coupled receptor and implications for receptor activation.
Sci Signal, 10, 2017
3NP1
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BU of 3np1 by Molmil
CRYSTAL STRUCTURE OF THE COMPLEX OF NITROPHORIN 1 FROM RHODNIUS PROLIXUS WITH CYANIDE
Descriptor: CYANIDE ION, NITROPHORIN 1, PHOSPHATE ION, ...
Authors:Weichsel, A, Andersen, J.F, Champagne, D.E, Walker, F.A, Montfort, W.R.
Deposit date:1998-01-22
Release date:1998-05-27
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of a nitric oxide transport protein from a blood-sucking insect.
Nat.Struct.Biol., 5, 1998

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