PDB: 760 resultsInfo pagesStatus searchChemie searchBIRD

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1TK5	T7 DNA polymerase binary complex with 8 oxo guanosine in the templating strand Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(*CP*CP*CP*(8OG)P*CP*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', 5'-D(*CP*GP*AP*AP*A*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*(DDG)P*TP*GP*CP*AP*A)-3', ... Authors: Brieba, L.G, Eichman, B.F, Kokoska, R.J, Doublie, S, Kunkel, T.A, Ellenberger, T. Deposit date: 2004-06-08 Release date: 2004-08-31 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase. Embo J., 23, 2004
1TK0	T7 DNA polymerase ternary complex with 8 oxo guanosine and ddCTP at the insertion site Descriptor: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 5'-D(*CP*CP*CP*(8OG)P*CP*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3', ... Authors: Brieba, L.G, Eichman, B.F, Kokoska, R.J, Doublie, S, Kunkel, T.A, Ellenberger, T. Deposit date: 2004-06-07 Release date: 2004-08-31 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.3 Å) Cite: Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase. Embo J., 23, 2004
6XAR	Structure of CBL tyrosine kinase binding domain (TKBD) with C-terminal tail of Src-like kinase protein 2 (SLAP2) Descriptor: CALCIUM ION, E3 ubiquitin-protein ligase CBL, Src-like-adapter 2 Authors: Wybenga-Groot, L.E, McGlade, C.J. Deposit date: 2020-06-04 Release date: 2021-03-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (2.501 Å) Cite: SLAP2 Adaptor Binding Disrupts c-CBL Autoinhibition to Activate Ubiquitin Ligase Function. J.Mol.Biol., 433, 2021
5JBK	Trichoderma harzianum GH1 beta-glucosidase ThBgl1 Descriptor: Beta-glucosidase, GLYCEROL Authors: Florindo, R.N, Mutti, H.S, Polikarpov, I, Nascimento, A.S. Deposit date: 2016-04-13 Release date: 2017-08-09 Last modified: 2023-09-27 Method: X-RAY DIFFRACTION (2.593 Å) Cite: Structural insights into beta-glucosidase transglycosylation based on biochemical, structural and computational analysis of two GH1 enzymes from Trichoderma harzianum. N Biotechnol, 40, 2018
1TKD	T7 DNA polymerase ternary complex with 8 oxo guanosine and dCMP at the elongation site Descriptor: 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA (5'-D(*CP*CP*CP*AP*(8OG)P*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*TP*CP*G)-3'), ... Authors: Brieba, L.G, Eichman, B.F, Kokoska, R.J, Doublie, S, Kunkel, T.A, Ellenberger, T. Deposit date: 2004-06-08 Release date: 2004-08-31 Last modified: 2023-08-23 Method: X-RAY DIFFRACTION (2.49 Å) Cite: Structural basis for the dual coding potential of 8-oxoguanosine by a high-fidelity DNA polymerase. Embo J., 23, 2004
6LUR	Human PUF60 UHM domain (thioredoxin fusion) in complex with a small molecule binder Descriptor: 4-[2-[4-(aminomethyl)phenyl]phenyl]piperazin-2-one, Thioredoxin 1,Poly(U)-binding-splicing factor PUF60 Authors: Takahashi, M, Hanzawa, H. Deposit date: 2020-01-30 Release date: 2020-04-29 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2 Å) Cite: Revisiting biomolecular NMR spectroscopy for promoting small-molecule drug discovery. J.Biomol.Nmr, 74, 2020
2EIO	Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts Descriptor: Thioredoxin 1 Authors: Kobayashi, M. Deposit date: 2007-03-13 Release date: 2007-09-11 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.6 Å) Cite: Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts J.Mol.Biol., 372, 2007
2EIQ	Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, COPPER (II) ION, Thioredoxin 1 Authors: Kobayashi, M. Deposit date: 2007-03-13 Release date: 2007-09-11 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.9 Å) Cite: Design of Disulfide-linked Thioredoxin Dimers and Multimers Through Analysis of Crystal Contacts J.Mol.Biol., 372, 2007
6IBL	ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND AGONIST FORMOTEROL AND NANOBODY Nb80 Descriptor: Camelid antibody fragment Nb80, HEGA-10, SODIUM ION, ... Authors: Warne, T, Edwards, P.C, Dore, A.S, Leslie, A.G.W, Tate, C.G. Deposit date: 2018-11-30 Release date: 2019-01-09 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Molecular basis of beta-arrestin coupling to formoterol-bound beta1-adrenoceptor. Nature, 583, 2020
6H7L	ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND PARTIAL AGONIST DOBUTAMINE AND NANOBODY Nb6B9 Descriptor: Beta-1 adrenergic receptor, Camelid antibody fragment Nb6B9, DOBUTAMINE, ... Authors: Warne, T, Edwards, P.C, Dore, A.S, Leslie, A.G.W, Tate, C.G. Deposit date: 2018-07-31 Release date: 2018-10-17 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.7 Å) Cite: Molecular basis for high-affinity agonist binding in GPCRs. Science, 364, 2019
6H7O	ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND WEAK PARTIAL AGONIST CYANOPINDOLOL AND NANOBODY Nb6B9 Descriptor: 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile, Beta-1 adrenergic receptor, Camelid antibody fragment Nb6B9, ... Authors: Warne, T, Edwards, P.C, Dore, A.S, Leslie, A.G.W, Tate, C.G. Deposit date: 2018-07-31 Release date: 2018-10-17 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Molecular basis for high-affinity agonist binding in GPCRs. Science, 364, 2019
3AQX	Crystal structure of Bombyx mori beta-GRP/GNBP3 N-terminal domain with laminarihexaoses Descriptor: Beta-1,3-glucan-binding protein, GLYCEROL, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose Authors: Kanagawa, M, Satoh, T, Ikeda, A, Adachi, Y, Ohno, N, Yamaguchi, Y. Deposit date: 2010-11-22 Release date: 2011-06-22 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.05 Å) Cite: Structural insights into recognition of triple-helical beta-glucans by an insect fungal receptor J.Biol.Chem., 286, 2011
6H7M	ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND PARTIAL AGONIST SALBUTAMOL AND NANOBODY Nb6B9 Descriptor: Beta-1 adrenergic receptor, Camelid antibody fragment Nb6B9, HEGA-10, ... Authors: Warne, T, Edwards, P.C, Dore, A.S, Leslie, A.G.W, Tate, C.G. Deposit date: 2018-07-31 Release date: 2018-10-17 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.76 Å) Cite: Molecular basis for high-affinity agonist binding in GPCRs. Science, 364, 2019
6H7N	ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND PARTIAL AGONIST XAMOTEROL AND NANOBODY Nb6B9 Descriptor: Beta-1 adrenergic receptor, Camelid antibody fragment Nb6B9, HEGA-10, ... Authors: Warne, T, Edwards, P.C, Dore, A.S, Leslie, A.G.W, Tate, C.G. Deposit date: 2018-07-31 Release date: 2018-10-17 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Molecular basis for high affinity agonist binding in GPCRs Biorxiv, 2018
3AQY	Crystal structure of Plodia interpunctella beta-GRP/GNBP3 N-terminal domain Descriptor: Beta-1,3-glucan-binding protein Authors: Kanagawa, M, Satoh, T, Ikeda, A, Adachi, Y, Ohno, N, Yamaguchi, Y. Deposit date: 2010-11-22 Release date: 2011-06-22 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (1.58 Å) Cite: Structural insights into recognition of triple-helical beta-glucans by an insect fungal receptor J.Biol.Chem., 286, 2011
3AQZ	Crystal structure of Plodia interpunctella beta-GRP/GNBP3 N-terminal domain with laminarihexaoses Descriptor: Beta-1,3-glucan-binding protein, beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose-(1-3)-beta-D-glucopyranose Authors: Kanagawa, M, Satoh, T, Ikeda, A, Adachi, Y, Ohno, N, Yamaguchi, Y. Deposit date: 2010-11-22 Release date: 2011-06-22 Last modified: 2023-11-01 Method: X-RAY DIFFRACTION (2.2 Å) Cite: Structural insights into recognition of triple-helical beta-glucans by an insect fungal receptor J.Biol.Chem., 286, 2011
5E4W	Crystal structure of cpSRP43 chromodomains 2 and 3 in complex with the Alb3 tail Descriptor: CALCIUM ION, GLYCEROL, Inner membrane protein ALBINO3, ... Authors: Horn, A, Ahmed, Y.L, Wild, K, Sinning, I. Deposit date: 2015-10-07 Release date: 2015-12-02 Last modified: 2024-01-10 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Structural basis for cpSRP43 chromodomain selectivity and dynamics in Alb3 insertase interaction. Nat Commun, 6, 2015
6H7J	ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND AGONIST ISOPRENALINE AND NANOBODY Nb80 Descriptor: Beta-1 adrenergic receptor, Camelid antibody fragment Nb80, HEGA-10, ... Authors: Warne, T, Edwards, P.C, Dore, A.S, Leslie, A.G.W, Tate, C.G. Deposit date: 2018-07-31 Release date: 2018-10-17 Last modified: 2024-01-17 Method: X-RAY DIFFRACTION (2.8 Å) Cite: Molecular basis for high-affinity agonist binding in GPCRs. Science, 364, 2019
6TRV	Structure of SapL1 lectin in complex with alpha methyl fucoside Descriptor: GLYCEROL, SULFATE ION, Uncharacterized protein, ... Authors: Martinez Alarcon, D, Varrot, A. Deposit date: 2019-12-19 Release date: 2020-12-23 Last modified: 2024-01-24 Method: X-RAY DIFFRACTION (2.4 Å) Cite: Biochemical and structural studies of target lectin SapL1 from the emerging opportunistic microfungus Scedosporium apiospermum. Sci Rep, 11, 2021
7V8H	Crystal structure of LRR domain from Shigella flexneri IpaH1.4 Descriptor: RING-type E3 ubiquitin transferase Authors: Liu, J, Wang, Y, Pan, L. Deposit date: 2021-08-23 Release date: 2022-03-30 Last modified: 2023-11-29 Method: X-RAY DIFFRACTION (2.46 Å) Cite: Mechanistic insights into the subversion of the linear ubiquitin chain assembly complex by the E3 ligase IpaH1.4 of Shigella flexneri. Proc.Natl.Acad.Sci.USA, 119, 2022
7JST	Crystal structure of SARS-CoV-2 3CL in apo form Descriptor: 3C-like proteinase, PHOSPHATE ION Authors: Iketani, S, Forouhar, F, Liu, H, Hong, S.J, Lin, F.-Y, Nair, M.S, Zask, A, Huang, Y, Xing, L, Stockwell, B.R, Chavez, A, Ho, D.D. Deposit date: 2020-08-16 Release date: 2021-03-03 Last modified: 2023-10-18 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Lead compounds for the development of SARS-CoV-2 3CL protease inhibitors. Nat Commun, 12, 2021
7ALD	Antimicrobial peptide Capitellacin from polychaeta Capitella teleta Descriptor: BRICHOS domain-containing protein Authors: Tsarev, A.V, Reznikova, O.V, Shenkarev, Z.O. Deposit date: 2020-10-06 Release date: 2020-12-23 Last modified: 2023-06-14 Method: SOLUTION NMR Cite: Structure Elucidation and Functional Studies of a Novel beta-hairpin Antimicrobial Peptide from the Marine Polychaeta Capitella teleta . Mar Drugs, 18, 2020
4E8H	Structural of Bombyx mori glutathione transferase BmGSTD1 complex with GTT Descriptor: GLUTATHIONE, Glutathione S-transferase Authors: Tan, X, Ma, X.X, Hu, X.M, Chen, Q.M, Zhao, P, Xia, Q.Y, Zhou, C.Z. Deposit date: 2012-03-20 Release date: 2013-04-24 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.12 Å) Cite: Structural of Bombyx mori glutathione transferase BmGSTD1 complex with GTT To be Published
4E8E	Structural characterization of Bombyx mori glutathione transferase BmGSTD1 Descriptor: Glutathione S-transferase Authors: Tan, X, Ma, X.X, Hu, X.M, Chen, Q.M, Zhao, P, Xia, Q.Y, Zhou, C.Z. Deposit date: 2012-03-20 Release date: 2013-04-24 Last modified: 2023-11-08 Method: X-RAY DIFFRACTION (2.51 Å) Cite: Structural characterization of Bombyx mori glutathione transferase BmGSTD1 To be Published
3N3F	Crystal Structure of the Human Collagen XV Trimerization Domain: A Potent Trimerizing Unit Common to Multiplexin Collagens Descriptor: Collagen alpha-1(XV) chain Authors: Wirz, J.A. Deposit date: 2010-05-19 Release date: 2010-10-20 Last modified: 2023-09-06 Method: X-RAY DIFFRACTION (2.005 Å) Cite: Crystal structure of the human collagen XV trimerization domain: A potent trimerizing unit common to multiplexin collagens. Matrix Biol., 30, 2011

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