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2L9W
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Solution Structure of the C-terminal domain of Prp24
Descriptor: U4/U6 snRNA-associated-splicing factor PRP24
Authors:Martin-Tumasz, S.A, Butcher, S.E.
Deposit date:2011-02-25
Release date:2011-06-29
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A novel occluded RNA recognition motif in Prp24 unwinds the U6 RNA internal stem loop.
Nucleic Acids Res., 39, 2011
1R6T
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BU of 1r6t by Molmil
crystal structure of human tryptophanyl-tRNA synthetase
Descriptor: GLYCEROL, TRYPTOPHANYL-5'AMP, Tryptophanyl-tRNA synthetase
Authors:Yang, X.-L, Otero, F.J, Skene, R.J, McRee, D.E, Ribas de Pouplana, L, Schimmel, P.
Deposit date:2003-10-16
Release date:2004-01-06
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures that suggest late development of genetic code components for differentiating aromatic side chains
Proc.Natl.Acad.Sci.USA, 100, 2003
2JLT
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BU of 2jlt by Molmil
Crystal structure of an RNA kissing complex
Descriptor: R06, TAR
Authors:DiPrimo, C, Fribourg, S.
Deposit date:2008-09-15
Release date:2009-08-18
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Exploring Tar-RNA Aptamer Loop-Loop Interaction by X-Ray Crystallography, Uv Spectroscopy and Surface Plasmon Resonance.
Nucleic Acids Res., 36, 2008
1KQ1
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BU of 1kq1 by Molmil
1.55 A Crystal structure of the pleiotropic translational regulator, Hfq
Descriptor: ACETIC ACID, Host Factor for Q beta
Authors:Schumacher, M.A, Pearson, R.F, Moller, T, Valentin-Hansen, P, Brennan, R.G.
Deposit date:2002-01-03
Release date:2002-07-10
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structures of the pleiotropic translational regulator Hfq and an Hfq-RNA complex: a bacterial Sm-like protein.
EMBO J., 21, 2002
4MSB
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BU of 4msb by Molmil
RNA 10mer duplex with two 2'-5'-linkages
Descriptor: RNA 10mer duplex with two 2'-5'-linkages, STRONTIUM ION
Authors:Sheng, J, Li, L, Engelhart, A.E, Gan, J, Wang, J, Szostak, J.W.
Deposit date:2013-09-18
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural insights into the effects of 2'-5' linkages on the RNA duplex.
Proc.Natl.Acad.Sci.USA, 111, 2014
1L8V
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BU of 1l8v by Molmil
Crystal Structure of a Mutant (C109G,G212C) P4-P6 Domain of the Group I Intron from Tetrahymena Thermophilia
Descriptor: MAGNESIUM ION, P4-P6 RNA ribozyme domain
Authors:Battle, D.J, Doudna, J.A.
Deposit date:2002-03-21
Release date:2002-08-23
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Specificity of RNA-RNA Helix Recognition
Proc.Natl.Acad.Sci.USA, 99, 2002
2WJ8
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Respiratory Syncitial Virus RiboNucleoProtein
Descriptor: BORATE ION, NUCLEOPROTEIN, RNA (5'-R(*CP*CP*CP*CP*CP*C)-3')
Authors:Tawar, R.G, Duquerroy, S, Vonrhein, C, Varela, P.F, Damier-Piolle, L, Castagne, N, MacLellan, K, Bedouelle, H, Bricogne, G, Bhella, D, Eleouet, J, Rey, F.A.
Deposit date:2009-05-25
Release date:2009-12-08
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:Crystal Structure of a Nucleocapsid-Like Nucleoprotein-RNA Complex of Respiratory Syncytial Virus
Science, 326, 2009
4MSR
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BU of 4msr by Molmil
RNA 10mer duplex with six 2'-5'-linkages
Descriptor: RNA 10mer duplex with six 2'-5'-linkages, STRONTIUM ION
Authors:Sheng, J, Li, L, Engelhart, A.E, Gan, J, Wang, J, Szostak, J.W.
Deposit date:2013-09-18
Release date:2014-02-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Structural insights into the effects of 2'-5' linkages on the RNA duplex.
Proc.Natl.Acad.Sci.USA, 111, 2014
2R8S
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BU of 2r8s by Molmil
High resolution structure of a specific synthetic FAB bound to P4-P6 RNA ribozyme domain
Descriptor: Fab heavy chain, Fab light chain, MAGNESIUM ION, ...
Authors:Ye, J.D, Tereshko, V, Sidhu, S.S, Koide, S, Kossiakoff, A.A, Piccirilli, J.A.
Deposit date:2007-09-11
Release date:2007-12-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Synthetic antibodies for specific recognition and crystallization of structured RNA
Proc.Natl.Acad.Sci.Usa, 105, 2008
2BJ2
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BU of 2bj2 by Molmil
RNA LOOP-LOOP COMPLEX: THE COLE1 INVERTED LOOP SEQUENCE, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: RNA (5'-R(*GP*CP*AP*CP*CP*GP*AP*AP*CP*CP*AP*UP*CP*CP*GP*GP*UP*GP*C)-3'), RNA (5'-R(*GP*GP*CP*AP*AP*CP*GP*GP*AP*UP*GP*GP*UP*UP*CP*GP*UP*UP*GP*CP*C)-3')
Authors:Lee, A.J, Crothers, D.M.
Deposit date:1998-07-02
Release date:1999-02-02
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of an RNA loop-loop complex: the ColE1 inverted loop sequence.
Structure, 6, 1998
1S2M
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BU of 1s2m by Molmil
Crystal Structure of the DEAD box protein Dhh1p
Descriptor: Putative ATP-dependent RNA helicase DHH1
Authors:Cheng, Z, Song, H.
Deposit date:2004-01-09
Release date:2005-03-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure and functional analysis of DEAD-box protein Dhh1p.
Rna, 11, 2005
4CSF
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BU of 4csf by Molmil
Structural insights into Toscana virus RNA encapsidation
Descriptor: NUCLEOPROTEIN, RNA (5'-R(*UP*GP*UP*GP*UP*UP*UP*CP*UP)-3')
Authors:Olal, D, Daumke, O.
Deposit date:2014-03-07
Release date:2014-04-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.598 Å)
Cite:Structural Insights Into RNA Encapsidation and Helical Assembly of the Toscana Virus Nucleoprotein.
Nucleic Acids Res., 42, 2014
1JZV
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BU of 1jzv by Molmil
Crystal structure of a bulged RNA from the SL2 stem-loop of the HIV-1 psi-RNA
Descriptor: 5'-R(*CP*AP*GP*UP*AP*CP*GP*(5IC)P*C)-3', 5'-R(*GP*GP*CP*GP*AP*CP*(5BU)P*G)-3', MAGNESIUM ION
Authors:Xiong, Y, Sudarsanakumar, C, Deng, J, Pan, B, Sundaralingam, M.
Deposit date:2001-09-17
Release date:2003-11-11
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of a Bulged RNA from the SL2 Stem-loop of the HIV-1 psi-RNA
To be Published
1D0U
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BU of 1d0u by Molmil
SOLUTION STRUCTURE OF AN RNA BINDING SITE FOR PHAGE MS2 COAT PROTEIN
Descriptor: PHAGE MS2 RNA BINDING SITE
Authors:Smith, J.S, Nikonowicz, E.P.
Deposit date:1999-09-14
Release date:2000-05-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Phosphorothioate substitution can substantially alter RNA conformation.
Biochemistry, 39, 2000
1D0T
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BU of 1d0t by Molmil
SOLUTION STRUCTURE OF A PHOSPHOROTHIOATE MODIFIED RNA BINDING SITE FOR PHAGE MS2 COAT PROTEIN
Descriptor: PHOSPHOROTHIOATE SUBSTITUTED PHAGE MS2 RNA BINDING SITE
Authors:Smith, J.S, Nikonowicz, E.P.
Deposit date:1999-09-14
Release date:2000-05-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Phosphorothioate substitution can substantially alter RNA conformation.
Biochemistry, 39, 2000
8B7A
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BU of 8b7a by Molmil
Tubulin - maytansinoid - 4 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Boiarska, Z, Perez-Pena, H, Abel, A.-C, Marzullo, P, Alvarez-Bernad, B, Bonato, F, Santini, B, Horvath, D, Lucena-Agell, D, Vasile, F, Sironi, M, Diaz, F.J, Steinmetz, M.O, Prota, A.E, Piaraccini, S, Passarella, D.
Deposit date:2022-09-29
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Maytansinol Functionalization: Towards Useful Probes for Studying Microtubule Dynamics.
Chemistry, 29, 2023
8B7C
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BU of 8b7c by Molmil
Tubulin-maytansinoid-12 complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Boiarska, Z, Perez-Pena, H, Abel, A.-C, Marzullo, P, Alvarez-Bernad, B, Bonato, F, Santini, B, Horvath, D, Lucena-Agell, D, Vasile, F, Sironi, M, Diaz, J.F, Steinmetz, M.O, Prota, A.E, Pieraccini, S, Passarella, D.
Deposit date:2022-09-29
Release date:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Maytansinol Functionalization: Towards Useful Probes for Studying Microtubule Dynamics.
Chemistry, 29, 2023
8B7B
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BU of 8b7b by Molmil
Tubulin - maytansinoid - 6 complex
Descriptor: (~{Z})-11-[[(1~{R},2~{R},3~{S},5~{S},6~{S},16~{E},18~{E},20~{R},21~{S})-11-chloranyl-12,20-dimethoxy-2,5,9,16-tetramethyl-21-oxidanyl-8,23-bis(oxidanylidene)-4,24-dioxa-9,22-diazatetracyclo[19.3.1.1^{10,14}.0^{3,5}]hexacosa-10(26),11,13,16,18-pentaen-6-yl]oxy]-11-oxidanylidene-undec-2-enoic acid, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Boiarska, Z, Perez-Pena, H, Abel, A.-C, Marzullo, P, Alvarez-Bernad, B, Bonato, F, Santini, B, Horvath, D, Lucena-Agell, D, Vasile, F, Sironi, M, Diaz, J.F, Steinmetz, M.O, Prota, A.E, Pieraccini, S, Passarella, D.
Deposit date:2022-09-29
Release date:2023-08-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Maytansinol Functionalization: Towards Useful Probes for Studying Microtubule Dynamics.
Chemistry, 29, 2023
4BPB
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BU of 4bpb by Molmil
STRUCTURAL INSIGHTS INTO RNA RECOGNITION BY RIG-I
Descriptor: 5'-R(*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP)-3', PROBABLE ATP-DEPENDENT RNA HELICASE DDX58, SULFATE ION, ...
Authors:Luo, D, Pyle, A.M.
Deposit date:2013-05-23
Release date:2013-06-19
Method:X-RAY DIFFRACTION (2.584 Å)
Cite:Structural Insights Into RNA Recognition by Rig-I.
Cell(Cambridge,Mass.), 147, 2011
2XLI
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BU of 2xli by Molmil
Crystal structure of the Csy4-crRNA complex, monoclinic form
Descriptor: 5'-R(*CP*UP*GP*CP*CP*GP*UP*AP*UP*AP*GP*GP*CP*A*DG*C)-3', CSY4 ENDORIBONUCLEASE
Authors:Haurwitz, R.E, Jinek, M, Wiedenheft, B, Zhou, K, Doudna, J.A.
Deposit date:2010-07-20
Release date:2010-09-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Sequence- and Structure-Specific RNA Processing by a Crispr Endonuclease.
Science, 329, 2010
4F3M
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BU of 4f3m by Molmil
Crystal structure of CRISPR-associated protein
Descriptor: 1,2-ETHANEDIOL, BH0337 protein, SULFATE ION
Authors:Ke, A, Nam, K.H.
Deposit date:2012-05-09
Release date:2012-08-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Cas5d Protein Processes Pre-crRNA and Assembles into a Cascade-like Interference Complex in Subtype I-C/Dvulg CRISPR-Cas System.
Structure, 20, 2012
4FF2
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BU of 4ff2 by Molmil
N4 mini-vRNAP transcription initiation complex, 2 min after soaking GTP, ATP and Mn
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Bacteriophage N4 P2 promoter, GUANOSINE-5'-MONOPHOSPHATE, ...
Authors:Murakami, K.S, Basu, R.S.
Deposit date:2012-05-30
Release date:2012-12-12
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Watching the Bacteriophage N4 RNA Polymerase Transcription by Time-dependent Soak-trigger-freeze X-ray Crystallography.
J.Biol.Chem., 288, 2013
2RSK
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BU of 2rsk by Molmil
RNA aptamer against prion protein in complex with the partial binding peptide
Descriptor: RNA (5'-R(*GP*GP*AP*GP*GP*AP*GP*GP*AP*GP*GP*A)-3'), partial binding peptide of Major prion protein
Authors:Mashima, T, Nishikawa, F, Kamatari, Y.O, Fujiwara, H, Nishikawa, S, Kuwata, K, Katahira, M.
Deposit date:2012-03-08
Release date:2013-02-13
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Anti-prion activity of an RNA aptamer and its structural basis
Nucleic Acids Res., 41, 2013
1YRJ
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BU of 1yrj by Molmil
Crystal Structure of Apramycin bound to a Ribosomal RNA A site oligonucleotide
Descriptor: APRAMYCIN, Bacterial 16 S Ribosomal RNA A Site Oligonucleotide, MAGNESIUM ION, ...
Authors:Han, Q, Zhao, Q, Fish, S, Simonsen, K.B, Vourloumis, D, Froelich, J.M, Wall, D, Hermann, T.
Deposit date:2005-02-03
Release date:2005-06-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular recognition by glycoside pseudo base pairs and triples in an apramycin-RNA complex.
Angew.Chem.Int.Ed.Engl., 44, 2005
2GV4
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BU of 2gv4 by Molmil
Solution structure of the poliovirus 3'-UTR Y-stem
Descriptor: Short RNA strand 5'-GGACCUCUCGAAAGAGUGGUCC-3'
Authors:Heus, H.A, Zoll, J, Tessari, M, van Kuppeveld, F.J.M, Melchers, W.J.G.
Deposit date:2006-05-02
Release date:2007-03-20
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Breaking pseudo-twofold symmetry in the poliovirus 3'-UTR Y-stem by restoring Watson-Crick base pairs.
Rna, 13, 2007

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