PDB: 45459 resultsInfo pagesStatus searchChemie searchBIRD

---

8RCT	Escherichia coli paused disome complex (Rotated disome interface class 2) Descriptor: 1,4-DIAMINOBUTANE, 16S ribosomal RNA, 23S ribosomal RNA, ... Authors: Fluegel, T, Schacherl, M. Deposit date: 2023-12-07 Release date: 2024-03-06 Last modified: 2024-04-24 Method: ELECTRON MICROSCOPY (5.32 Å) Cite: Transient disome complex formation in native polysomes during ongoing protein synthesis captured by cryo-EM. Nat Commun, 15, 2024
7QK5	In vitro assembled 266/297 - 391 tau filaments with KCl (10a) Descriptor: CHLORIDE ION, Microtubule-associated protein tau, POTASSIUM ION Authors: Lovestam, S, Scheres, S.H.W. Deposit date: 2021-12-17 Release date: 2022-02-16 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (1.92 Å) Cite: Assembly of recombinant tau into filaments identical to those of Alzheimer's disease and chronic traumatic encephalopathy. Elife, 11, 2022
5DYW	Crystal structure of human butyrylcholinesterase in complex with N-((1-benzylpiperidin-3-yl)methyl)-N-(2-methoxyethyl)naphthalene-2-sulfonamide Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... Authors: Coquelle, N, Brus, B, Colletier, J.P. Deposit date: 2015-09-25 Release date: 2017-01-18 Last modified: 2024-05-01 Method: X-RAY DIFFRACTION (2.5 Å) Cite: Development of an in-vivo active reversible butyrylcholinesterase inhibitor. Sci Rep, 6, 2016
8RGP	Closed Complex I from murine brain Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ... Authors: Vercellino, I, Sazanov, L.A. Deposit date: 2023-12-14 Release date: 2024-04-24 Last modified: 2024-07-31 Method: ELECTRON MICROSCOPY (3 Å) Cite: SCAF1 drives the compositional diversity of mammalian respirasomes. Nat.Struct.Mol.Biol., 31, 2024
7QSD	Bovine complex I in the active state at 3.1 A Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... Authors: Bridges, H.R, Blaza, J.N, Yin, Z, Chung, I, Hirst, J. Deposit date: 2022-01-13 Release date: 2022-03-02 Last modified: 2023-03-08 Method: ELECTRON MICROSCOPY (3.1 Å) Cite: Structural basis of mammalian respiratory complex I inhibition by medicinal biguanides. Science, 379, 2023
8EXH	Agrobacterium tumefaciens Tpilus Descriptor: (14S,17R)-20-amino-17-hydroxy-11,17-dioxo-12,16,18-trioxa-17lambda~5~-phosphaicosan-14-yl tetradecanoate, Protein virB2 Authors: Beltran, L.C, Egelman, E.H. Deposit date: 2022-10-25 Release date: 2023-03-22 Last modified: 2024-06-19 Method: ELECTRON MICROSCOPY (3.5 Å) Cite: Archaeal DNA-import apparatus is homologous to bacterial conjugation machinery Nat Commun, 14, 2023
8EN5	Structure of GII.4 norovirus in complex with Nanobody 56 Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GII.4 P domain, ... Authors: Kher, G, Sabin, C, Pancera, M, Koromyslova, A, Hansman, G. Deposit date: 2022-09-28 Release date: 2023-03-15 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (1.6 Å) Cite: Direct Blockade of the Norovirus Histo-Blood Group Antigen Binding Pocket by Nanobodies. J.Virol., 97, 2023
8QR0	Cryo-EM structure of the light-driven sodium pump ErNaR in the pentameric form at pH 4.3 Descriptor: Bacteriorhodopsin-like protein, DODECYL-BETA-D-MALTOSIDE, EICOSANE Authors: Kovalev, K, Podoliak, E, Lamm, G.H.U, Marin, E, Stetsenko, A, Guskov, A. Deposit date: 2023-10-06 Release date: 2024-04-24 Method: ELECTRON MICROSCOPY (2.5 Å) Cite: A subgroup of light-driven sodium pumps with an additional Schiff base counterion. Nat Commun, 15, 2024
7QH6	Cryo-EM structure of the human mtLSU assembly intermediate upon MRM2 depletion - class 1 Descriptor: 16S ribosomal RNA, 39S ribosomal protein L13, mitochondrial, ... Authors: Rebelo-Guiomar, P, Pellegrino, S, Dent, K.C, Warren, A.J, Minczuk, M. Deposit date: 2021-12-10 Release date: 2022-03-02 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (3.08 Å) Cite: A late-stage assembly checkpoint of the human mitochondrial ribosome large subunit. Nat Commun, 13, 2022
7QIQ	CRYSTAL STRUCTURE OF THE P1 aminobutanoic acid (ABU) BPTI MUTANT- BOVINE CHYMOTRYPSIN COMPLEX Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ... Authors: Dimos, N, Leppkes, J, Koksch, B, Wahl, M.C, Loll, B. Deposit date: 2021-12-15 Release date: 2022-03-09 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (1.85 Å) Cite: Fluorine-induced polarity increases inhibitory activity of BPTI towards chymotrypsin. Rsc Chem Biol, 3, 2022
8F4F	RT XFEL structure of Photosystem II 500 microseconds after the third illumination at 2.03 Angstrom resolution Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... Authors: Bhowmick, A, Hussein, R, Bogacz, I, Simon, P.S, Ibrahim, M, Chatterjee, R, Doyle, M.D, Cheah, M.H, Fransson, T, Chernev, P, Kim, I.-S, Makita, H, Dasgupta, M, Kaminsky, C.J, Zhang, M, Gatcke, J, Haupt, S, Nangca, I.I, Keable, S.M, Aydin, O, Tono, K, Owada, S, Gee, L.B, Fuller, F.D, Batyuk, A, Alonso-Mori, R, Holton, J.M, Paley, D.W, Moriarty, N.W, Mamedov, F, Adams, P.D, Brewster, A.S, Dobbek, H, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yano, J, Yachandra, V.K. Deposit date: 2022-11-10 Release date: 2023-03-22 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.03 Å) Cite: Structural evidence for intermediates during O 2 formation in photosystem II. Nature, 617, 2023
8F4H	RT XFEL structure of Photosystem II 1200 microseconds after the third illumination at 2.10 Angstrom resolution Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... Authors: Bhowmick, A, Hussein, R, Bogacz, I, Simon, P.S, Ibrahim, M, Chatterjee, R, Doyle, M.D, Cheah, M.H, Fransson, T, Chernev, P, Kim, I.-S, Makita, H, Dasgupta, M, Kaminsky, C.J, Zhang, M, Gatcke, J, Haupt, S, Nangca, I.I, Keable, S.M, Aydin, O, Tono, K, Owada, S, Gee, L.B, Fuller, F.D, Batyuk, A, Alonso-Mori, R, Holton, J.M, Paley, D.W, Moriarty, N.W, Mamedov, F, Adams, P.D, Brewster, A.S, Dobbek, H, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yano, J, Yachandra, V.K. Deposit date: 2022-11-10 Release date: 2023-03-22 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Structural evidence for intermediates during O 2 formation in photosystem II. Nature, 617, 2023
7QWR	Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC Descriptor: 28S rRNA, 5.8S ribosomal RNA, 5S ribosomal RNA, ... Authors: Jomaa, A, Gamerdinger, M, Hsieh, H, Wallisch, A, Chandrasekaran, V, Ulusoy, Z, Scaiola, A, Hegde, R, Shan, S, Ban, N, Deuerling, E. Deposit date: 2022-01-25 Release date: 2022-03-09 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (2.9 Å) Cite: Mechanism of signal sequence handover from NAC to SRP on ribosomes during ER-protein targeting. Science, 375, 2022
8EZ5	RT XFEL structure of the two-flash state of Photosystem II (2F, S3-rich) at 2.09 Angstrom resolution Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... Authors: Bhowmick, A, Hussein, R, Bogacz, I, Simon, P.S, Ibrahim, M, Chatterjee, R, Doyle, M.D, Cheah, M.H, Fransson, T, Chernev, P, Kim, I.-S, Makita, H, Dasgupta, M, Kaminsky, C.J, Zhang, M, Gatcke, J, Haupt, S, Nangca, I.I, Keable, S.M, Aydin, O, Tono, K, Owada, S, Gee, L.B, Fuller, F.D, Batyuk, A, Alonso-Mori, R, Holton, J.M, Paley, D.W, Moriarty, N.W, Mamedov, F, Adams, P.D, Brewster, A.S, Dobbek, H, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yano, J, Yachandra, V.K. Deposit date: 2022-10-31 Release date: 2023-03-22 Last modified: 2023-11-22 Method: X-RAY DIFFRACTION (2.09 Å) Cite: Structural evidence for intermediates during O 2 formation in photosystem II. Nature, 617, 2023
8FRH	Apo structure of D59C mutant of a melibiose transporter Descriptor: Melibiose permease, PENTAETHYLENE GLYCOL Authors: Guan, L, Hariharan, P. Deposit date: 2023-01-06 Release date: 2024-06-05 Method: X-RAY DIFFRACTION (3.18 Å) Cite: Apo structure of D59C mutant of a melibiose transporter To Be Published
8F4C	RT XFEL structure of the two-flash state of Photosystem II (2F, S3-rich) at 2.00 Angstrom resolution Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... Authors: Bhowmick, A, Hussein, R, Bogacz, I, Simon, P.S, Ibrahim, M, Chatterjee, R, Doyle, M.D, Cheah, M.H, Fransson, T, Chernev, P, Kim, I.-S, Makita, H, Dasgupta, M, Kaminsky, C.J, Zhang, M, Gatcke, J, Haupt, S, Nangca, I.I, Keable, S.M, Aydin, O, Tono, K, Owada, S, Gee, L.B, Fuller, F.D, Batyuk, A, Alonso-Mori, R, Holton, J.M, Paley, D.W, Moriarty, N.W, Mamedov, F, Adams, P.D, Brewster, A.S, Dobbek, H, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yano, J, Yachandra, V.K. Deposit date: 2022-11-10 Release date: 2023-03-22 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural evidence for intermediates during O 2 formation in photosystem II. Nature, 617, 2023
8QAX	Medicago truncatula HISN5 (IGPD) in complex with MN, FMT, GOL and TRS Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, FORMIC ACID, GLYCEROL, ... Authors: Witek, W, Ruszkowski, M. Deposit date: 2023-08-23 Release date: 2024-04-10 Method: X-RAY DIFFRACTION (1.69 Å) Cite: Targeting imidazole-glycerol phosphate dehydratase in plants: novel approach for structural and functional studies, and inhibitor blueprinting. Front Plant Sci, 15, 2024
8F4I	RT XFEL structure of Photosystem II 2000 microseconds after the third illumination at 2.00 Angstrom resolution Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... Authors: Bhowmick, A, Hussein, R, Bogacz, I, Simon, P.S, Ibrahim, M, Chatterjee, R, Doyle, M.D, Cheah, M.H, Fransson, T, Chernev, P, Kim, I.-S, Makita, H, Dasgupta, M, Kaminsky, C.J, Zhang, M, Gatcke, J, Haupt, S, Nangca, I.I, Keable, S.M, Aydin, O, Tono, K, Owada, S, Gee, L.B, Fuller, F.D, Batyuk, A, Alonso-Mori, R, Holton, J.M, Paley, D.W, Moriarty, N.W, Mamedov, F, Adams, P.D, Brewster, A.S, Dobbek, H, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yano, J, Yachandra, V.K. Deposit date: 2022-11-10 Release date: 2023-03-22 Last modified: 2023-08-16 Method: X-RAY DIFFRACTION (2 Å) Cite: Structural evidence for intermediates during O 2 formation in photosystem II. Nature, 617, 2023
8QO9	Cryo-EM structure of a human spliceosomal B complex protomer Descriptor: 116 kDa U5 small nuclear ribonucleoprotein component, MINX pre-mRNA, Microfibrillar-associated protein 1, ... Authors: Zhang, Z, Kumar, V, Dybkov, O, Will, C.L, Urlaub, H, Stark, H, Luehrmann, R. Deposit date: 2023-09-28 Release date: 2024-01-24 Last modified: 2024-08-07 Method: ELECTRON MICROSCOPY (5.29 Å) Cite: Cryo-EM analyses of dimerized spliceosomes provide new insights into the functions of B complex proteins. Embo J., 43, 2024
7QWS	Structure of ribosome translating beta-tubulin in complex with TTC5 and NAC Descriptor: 28S rRNA, 5.8S rRNA, 5S rRNA, ... Authors: Jomaa, A, Gamerdinger, M, Hsieh, H, Wallisch, A, Chandrasekaran, V, Ulusoy, Z, Scaiola, A, Hegde, R, Shan, S, Ban, N, Deuerling, E. Deposit date: 2022-01-25 Release date: 2022-03-09 Last modified: 2024-07-17 Method: ELECTRON MICROSCOPY (3.4 Å) Cite: Mechanism of signal sequence handover from NAC to SRP on ribosomes during ER-protein targeting. Science, 375, 2022
8QYF	Crystal structure of ClpP from Staphylococcus epidermidis in complex with ixazomib Descriptor: ATP-dependent Clp protease proteolytic subunit, [(1~{R})-1-[2-[[2,5-bis(chloranyl)phenyl]carbonylamino]ethanoylamino]-3-methyl-butyl]boronic acid Authors: Franca, B.A, Rohde, H, Betzel, C. Deposit date: 2023-10-26 Release date: 2024-01-17 Last modified: 2024-02-14 Method: X-RAY DIFFRACTION (2.33 Å) Cite: Molecular insights into the dynamic modulation of bacterial ClpP function and oligomerization by peptidomimetic boronate compounds. Sci Rep, 14, 2024
7QNQ	Structure of the Aux2 relaxosome protein of plasmid pLS20 Descriptor: Auxiliary relaxosome protein, CHLORIDE ION, MAGNESIUM ION Authors: Boer, D.R, Crespo, I. Deposit date: 2021-12-22 Release date: 2022-03-09 Last modified: 2024-06-19 Method: X-RAY DIFFRACTION (1.89 Å) Cite: Structural and biochemical characterization of the relaxosome auxiliary proteins encoded on the Bacillus subtilis plasmid pLS20. Comput Struct Biotechnol J, 20, 2022
8F4K	RT XFEL structure of the three-flash state of Photosystem II (3F, S0-rich) at 2.16 Angstrom resolution Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ... Authors: Bhowmick, A, Hussein, R, Bogacz, I, Simon, P.S, Ibrahim, M, Chatterjee, R, Doyle, M.D, Cheah, M.H, Fransson, T, Chernev, P, Kim, I.-S, Makita, H, Dasgupta, M, Kaminsky, C.J, Zhang, M, Gatcke, J, Haupt, S, Nangca, I.I, Keable, S.M, Aydin, O, Tono, K, Owada, S, Gee, L.B, Fuller, F.D, Batyuk, A, Alonso-Mori, R, Holton, J.M, Paley, D.W, Moriarty, N.W, Mamedov, F, Adams, P.D, Brewster, A.S, Dobbek, H, Sauter, N.K, Bergmann, U, Zouni, A, Messinger, J, Kern, J, Yano, J, Yachandra, V.K. Deposit date: 2022-11-10 Release date: 2023-03-22 Last modified: 2023-10-25 Method: X-RAY DIFFRACTION (2.16 Å) Cite: Structural evidence for intermediates during O 2 formation in photosystem II. Nature, 617, 2023
6O2B	Crystal structure of 4493 Fab in complex with circumsporozoite protein DND and anti-kappa VHH domain Descriptor: 1,2-ETHANEDIOL, 4493 Fab heavy chain, 4493 Kappa light chain, ... Authors: Scally, S.W, Bosch, A, Prieto, K, Murugan, R, Wardemann, H, Julien, J.P. Deposit date: 2019-02-22 Release date: 2020-07-01 Last modified: 2024-04-03 Method: X-RAY DIFFRACTION (2.1 Å) Cite: Evolution of protective human antibodies against Plasmodium falciparum circumsporozoite protein repeat motifs. Nat. Med., 26, 2020
7QY3	Crystal structure of the halohydrin dehalogenase HheG D114C mutant cross-linked with BMOE Descriptor: 1,1'-ethane-1,2-diylbis(1H-pyrrole-2,5-dione), Putative oxidoreductase, SULFATE ION Authors: Henke, S, Blankenfeldt, W, Schallmey, A. Deposit date: 2022-01-27 Release date: 2022-03-09 Last modified: 2024-01-31 Method: X-RAY DIFFRACTION (2.72 Å) Cite: Biocatalytically active and stable cross-linked enzyme crystals of halohydrin dehalogenase HheG by protein engineering Chemcatchem, 2022

<1091109210931094109510961097109810991100110111021103110411051106>