Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5WI0
DownloadVisualize
BU of 5wi0 by Molmil
Crystal structure of human NAMPT with fragment 2: 2-[(2-fluorophenyl)amino]-6-propylpyrimidin-4(3H)-one
Descriptor: 2-[(2-fluorophenyl)amino]-6-propylpyrimidin-4(3H)-one, Nicotinamide phosphoribosyltransferase
Authors:Longenecker, K.L, Raich, D, Korepanova, A.V.
Deposit date:2017-07-18
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Fragment-based discovery of a potent NAMPT inhibitor.
Bioorg. Med. Chem. Lett., 28, 2018
5WI1
DownloadVisualize
BU of 5wi1 by Molmil
Crystal structure of human NAMPT with fragment 5: (3E)-3-[(phenylamino)methylidene]oxan-2-one
Descriptor: (3E)-3-[(phenylamino)methylidene]oxan-2-one, Nicotinamide phosphoribosyltransferase, SULFATE ION
Authors:Longenecker, K.L, Raich, D, Korepanova, A.V.
Deposit date:2017-07-18
Release date:2018-01-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Fragment-based discovery of a potent NAMPT inhibitor.
Bioorg. Med. Chem. Lett., 28, 2018
1Y4T
DownloadVisualize
BU of 1y4t by Molmil
Ferric binding protein from Campylobacter jejuni
Descriptor: FE (III) ION, putative iron-uptake ABC transport system periplasmic iron-binding protein
Authors:Tom-Yew, S.A.L, Cui, D.T, Bekker, E.G, Murphy, M.E.P.
Deposit date:2004-12-01
Release date:2005-01-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Anion-independent iron coordination by the Campylobacter jejuni ferric binding protein
J.Biol.Chem., 280, 2005
2FFY
DownloadVisualize
BU of 2ffy by Molmil
AmpC beta-lactamase N289A mutant in complex with a boronic acid deacylation transition state analog compound SM3
Descriptor: (1R)-1-(2-THIENYLACETYLAMINO)-1-PHENYLMETHYLBORONIC ACID, Beta-lactamase, PHOSPHATE ION, ...
Authors:Chen, Y, Minasov, G, Roth, T.A, Prati, F, Shoichet, B.K.
Deposit date:2005-12-20
Release date:2006-03-28
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.07 Å)
Cite:The deacylation mechanism of AmpC beta-lactamase at ultrahigh resolution
J.Am.Chem.Soc., 128, 2006
5Z1Y
DownloadVisualize
BU of 5z1y by Molmil
mBjAMP1 structure
Descriptor: mBjAMP1 peptide
Authors:Nam, J.Y, Lee, C.W.
Deposit date:2017-12-28
Release date:2019-01-02
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:mBjAMP1 structure
To Be Published
2JKN
DownloadVisualize
BU of 2jkn by Molmil
DraE Adhesin in complex with Chloramphenicol Succinate (trigonal form)
Descriptor: 1,2-ETHANEDIOL, CHLORAMPHENICOL SUCCINATE, DR HEMAGGLUTININ STRUCTURAL SUBUNIT, ...
Authors:Pettigrew, D.M, Roversi, P, Davies, S.G, Russell, A.J, Lea, S.M.
Deposit date:2008-08-28
Release date:2008-12-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A structural study of the interaction between the Dr haemagglutinin DraE and derivatives of chloramphenicol.
Acta Crystallogr. D Biol. Crystallogr., 65, 2009
2JKL
DownloadVisualize
BU of 2jkl by Molmil
DraE Adhesin in complex with Bromamphenicol
Descriptor: 1,2-ETHANEDIOL, BROMAMPHENICOL, CHLORAMPHENICOL, ...
Authors:Pettigrew, D.M, Roversi, P, Davies, S.G, Russell, A.J, Lea, S.M.
Deposit date:2008-08-28
Release date:2008-12-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Structural Study of the Interaction between the Dr Haemagglutinin Drae and Derivatives of Chloramphenicol
Acta Crystallogr.,Sect.D, 65, 2009
2HXW
DownloadVisualize
BU of 2hxw by Molmil
Crystal Structure of Peb3 from Campylobacter jejuni
Descriptor: CITRATE ANION, Major antigenic peptide PEB3
Authors:Rangarajan, E.S, Bhatia, S, Watson, D.C, Munger, C, Cygler, M, Matte, A, Young, N.M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI)
Deposit date:2006-08-04
Release date:2007-05-01
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural context for protein N-glycosylation in bacteria: The structure of PEB3, an adhesin from Campylobacter jejuni.
Protein Sci., 16, 2007
2I9D
DownloadVisualize
BU of 2i9d by Molmil
chloramphenicol acetyltransferase
Descriptor: Chloramphenicol acetyltransferase
Authors:Duke, N.E.C, Li, H, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-09-05
Release date:2006-10-17
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:chloramphenicol acetyltransferase
To be Published
5U21
DownloadVisualize
BU of 5u21 by Molmil
X-ray structure of the WlaRF aminotransferase from Campylobacter jejuni, K184A mutant in complex with TDP-Qui3N
Descriptor: (2R,3R,4S,5S,6R)-3,5-dihydroxy-4-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}-6-methyltetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate, 1,2-ETHANEDIOL, CHLORIDE ION, ...
Authors:Thoden, J.B, Holden, H.M, Dow, G.T, Gilbert, M.
Deposit date:2016-11-29
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural investigation on WlaRG from Campylobacter jejuni: A sugar aminotransferase.
Protein Sci., 26, 2017
5U1Z
DownloadVisualize
BU of 5u1z by Molmil
X-ray structure of the WlarG aminotransferase, apo form, from Campylobacter jejune
Descriptor: CHLORIDE ION, Putative aminotransferase, SODIUM ION
Authors:Holden, H.M, Thoden, J.B, Dow, G.T, Gilbert, M.
Deposit date:2016-11-29
Release date:2017-01-11
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural investigation on WlaRG from Campylobacter jejuni: A sugar aminotransferase.
Protein Sci., 26, 2017
5U20
DownloadVisualize
BU of 5u20 by Molmil
X-ray structure of the WlaRG aminotransferase from Campylobacter jejuni, internal PLP-aldimine
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Putative aminotransferase, ...
Authors:Thoden, J.B, Holden, H.M, Dow, G.T, Gilbert, M.
Deposit date:2016-11-29
Release date:2017-01-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural investigation on WlaRG from Campylobacter jejuni: A sugar aminotransferase.
Protein Sci., 26, 2017
5U23
DownloadVisualize
BU of 5u23 by Molmil
X-ray structure of the WlaRG aminotransferase from Campylobacter jejuni in complex with TDP-Qui3N
Descriptor: (2R,3R,4S,5S,6R)-3,5-dihydroxy-4-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}-6-methyltetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate, 1,2-ETHANEDIOL, 3[N-MORPHOLINO]PROPANE SULFONIC ACID, ...
Authors:Holden, H.M, Thoden, J.B, Dow, G.T, Gilbert, M.
Deposit date:2016-11-29
Release date:2017-01-11
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Structural investigation on WlaRG from Campylobacter jejuni: A sugar aminotransferase.
Protein Sci., 26, 2017
8CPP
DownloadVisualize
BU of 8cpp by Molmil
CRYSTAL STRUCTURES OF CYTOCHROME P450-CAM COMPLEXED WITH CAMPHANE, THIOCAMPHOR, AND ADAMANTANE: FACTORS CONTROLLING P450 SUBSTRATE HYDROXYLATION
Descriptor: CYTOCHROME P450CAM, PROTOPORPHYRIN IX CONTAINING FE, THIOCAMPHOR
Authors:Raag, R, Poulos, T.L.
Deposit date:1990-05-18
Release date:1991-07-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of cytochrome P-450CAM complexed with camphane, thiocamphor, and adamantane: factors controlling P-450 substrate hydroxylation.
Biochemistry, 30, 1991
6XU4
DownloadVisualize
BU of 6xu4 by Molmil
Crystal structure of the genetically-encoded FGCaMP calcium indicator in its calcium-bound state
Descriptor: CALCIUM ION, FGCamp
Authors:Boyko, K.M, Nikolaeva, A.Y, Korzhenevskiy, D.A, Barykina, N.V, Subach, O.M, Subach, F.V.
Deposit date:2020-01-17
Release date:2020-04-15
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.18 Å)
Cite:FGCaMP7, an Improved Version of Fungi-Based Ratiometric Calcium Indicator for In Vivo Visualization of Neuronal Activity.
Int J Mol Sci, 21, 2020
7RWS
DownloadVisualize
BU of 7rws by Molmil
Structure of SAVED domain of Cap5 from Lactococcus lactis in complex with cGAMP
Descriptor: 3'2'-cGAMP, SAVED domain-containing protein
Authors:Huang, R.H, Chakravarti, A, Fatma, S.
Deposit date:2021-08-20
Release date:2021-11-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Molecular mechanisms of the CdnG-Cap5 antiphage defense system employing 3',2'-cGAMP as the second messenger.
Nat Commun, 12, 2021
6WPL
DownloadVisualize
BU of 6wpl by Molmil
Structure of Cytochrome P450tcu
Descriptor: 5-EXO-HYDROXYCAMPHOR, Cytochrome P-450cam, subunit of camphor 5-monooxygenase system, ...
Authors:Murarka, V.C, Batabyal, D, Amaya, J.A, Sevrioukova, I.F, Poulos, T.L.
Deposit date:2020-04-27
Release date:2020-07-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.097 Å)
Cite:Unexpected Differences between Two Closely Related Bacterial P450 Camphor Monooxygenases.
Biochemistry, 59, 2020
6XVP
DownloadVisualize
BU of 6xvp by Molmil
Crystal structure of Neprilysin in complex with Sampatrilat.
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Neprilysin, ...
Authors:Cozier, G.E, Acharya, K.R, Sharma, U.
Deposit date:2020-01-22
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Molecular Basis for Omapatrilat and Sampatrilat Binding to Neprilysin-Implications for Dual Inhibitor Design with Angiotensin-Converting Enzyme.
J.Med.Chem., 63, 2020
6X7Q
DownloadVisualize
BU of 6x7q by Molmil
Chloramphenicol acetyltransferase type III in complex with chloramphenicol and acetyl-oxa(dethia)-CoA
Descriptor: CHLORAMPHENICOL, Chloramphenicol acetyltransferase 3, DI(HYDROXYETHYL)ETHER, ...
Authors:Benjamin, A.B, Stunkard, L.M, Ling, J, Nice, J.N, Lohman, J.R.
Deposit date:2020-05-30
Release date:2021-06-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.68 Å)
Cite:Structures of chloramphenicol acetyltransferase III and Escherichia coli beta-keto-acylsynthase III co-crystallized with partially hydrolysed acetyl-oxa(de-thia)CoA
Acta Crystallogr.,Sect.F, 2023
6SVY
DownloadVisualize
BU of 6svy by Molmil
Crystal structure of Neprilysin in complex with Sampatrilat-ASP.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Neprilysin, Sampatrilat-Asp, ...
Authors:Cozier, G.E, Acharya, K.R, Sharma, U.
Deposit date:2019-09-19
Release date:2020-05-13
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Molecular Basis for Omapatrilat and Sampatrilat Binding to Neprilysin-Implications for Dual Inhibitor Design with Angiotensin-Converting Enzyme.
J.Med.Chem., 63, 2020
7RQD
DownloadVisualize
BU of 7rqd by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MTI-tripeptidyl-tRNA analog ACCA-ITM, and chloramphenicol at 2.50A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Syroegin, E.A, Flemmich, L, Klepacki, D, Vazquez-Laslop, N, Micura, R, Polikanov, Y.S.
Deposit date:2021-08-06
Release date:2022-01-26
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for the context-specific action of the classic peptidyl transferase inhibitor chloramphenicol.
Nat.Struct.Mol.Biol., 29, 2022
7RQE
DownloadVisualize
BU of 7rqe by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, A-site deacylated tRNA analog CACCA, P-site MAI-tripeptidyl-tRNA analog ACCA-IAM, and chloramphenicol at 2.40A resolution
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 16S Ribosomal RNA, 23S Ribosomal RNA, ...
Authors:Syroegin, E.A, Flemmich, L, Klepacki, D, Vazquez-Laslop, N, Micura, R, Polikanov, Y.S.
Deposit date:2021-08-06
Release date:2022-01-26
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis for the context-specific action of the classic peptidyl transferase inhibitor chloramphenicol.
Nat.Struct.Mol.Biol., 29, 2022
7U2J
DownloadVisualize
BU of 7u2j by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution
Descriptor: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Syroegin, E.A, Aleksandrova, E.V, Polikanov, Y.S.
Deposit date:2022-02-24
Release date:2022-07-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Structural basis for the inability of chloramphenicol to inhibit peptide bond formation in the presence of A-site glycine.
Nucleic Acids Res., 50, 2022
1SZO
DownloadVisualize
BU of 1szo by Molmil
Crystal Structure Analysis of the 6-Oxo Camphor Hydrolase His122Ala Mutant Bound to Its Natural Product (2S,4S)-alpha-Campholinic Acid
Descriptor: (2S,4S)-4-(2,2-DIHYDROXYETHYL)-2,3,3-TRIMETHYLCYCLOPENTANONE, 6-oxocamphor hydrolase, CALCIUM ION
Authors:Leonard, P.M, Grogan, G.
Deposit date:2004-04-06
Release date:2004-06-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of 6-oxo camphor hydrolase H122A mutant bound to its natural product, (2S,4S)-alpha-campholinic acid: mutant structure suggests an atypical mode of transition state binding for a crotonase homolog.
J.Biol.Chem., 279, 2004
2XAT
DownloadVisualize
BU of 2xat by Molmil
COMPLEX OF THE HEXAPEPTIDE XENOBIOTIC ACETYLTRANSFERASE WITH CHLORAMPHENICOL AND DESULFO-COENZYME A
Descriptor: CHLORAMPHENICOL, DESULFO-COENZYME A, XENOBIOTIC ACETYLTRANSFERASE
Authors:Beaman, T.W, Sugantino, M, Roderick, S.L.
Deposit date:1998-03-11
Release date:1998-06-17
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure of the hexapeptide xenobiotic acetyltransferase from Pseudomonas aeruginosa.
Biochemistry, 37, 1998

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon