Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 211 results

5ZMV
DownloadVisualize
BU of 5zmv by Molmil
Crystal structure of the E309A mutant of SR Ca2+-ATPase in E2(TG)
Descriptor: OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, ...
Authors:Ogawa, H, Hirata, A, Tsueda, J, Toyoshima, C.
Deposit date:2018-04-06
Release date:2018-12-12
Last modified:2018-12-26
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Mechanism of the E2 to E1 transition in Ca2+pump revealed by crystal structures of gating residue mutants.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6JXI
DownloadVisualize
BU of 6jxi by Molmil
Rb+-bound E2-MgF state of the gastric proton pump (Tyr799Trp)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Abe, K, Irie, K.
Deposit date:2019-04-23
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
5ZMW
DownloadVisualize
BU of 5zmw by Molmil
Crystal structure of the E309Q mutant of SR Ca2+-ATPase in E2(TG)
Descriptor: DECYL-BETA-D-MALTOPYRANOSIDE, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
Authors:Ogawa, H, Hirata, A, Tsueda, J, Toyoshima, C.
Deposit date:2018-04-06
Release date:2019-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mechanism of the E2 to E1 transition in Ca2+pump revealed by crystal structures of gating residue mutants.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6HEF
DownloadVisualize
BU of 6hef by Molmil
Room temperature structure of the (SR)Ca2+-ATPase Ca2-E1-CaAMPPCP form
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, CALCIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Hjorth-Jensen, S, Sorensen, T.L.M, Oksanen, E, Andersen, J.L, Olesen, C, Moller, J.V, Nissen, P.
Deposit date:2018-08-20
Release date:2018-08-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.538 Å)
Cite:Membrane-protein crystals for neutron diffraction.
Acta Crystallogr D Struct Biol, 74, 2018
5ZTF
DownloadVisualize
BU of 5ztf by Molmil
Structure of Ca2+ ATPase
Descriptor: CALCIUM ION, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Inoue, M, Watanabe, S, Inaba, K.
Deposit date:2018-05-03
Release date:2019-05-22
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.45 Å)
Cite:Structural Basis of Sarco/Endoplasmic Reticulum Ca2+-ATPase 2b Regulation via Transmembrane Helix Interplay.
Cell Rep, 27, 2019
3W5C
DownloadVisualize
BU of 3w5c by Molmil
Crystal structure of the calcium pump in the E2 state free from exogenous inhibitors
Descriptor: PHOSPHATIDYLETHANOLAMINE, SERCA1a, SODIUM ION
Authors:Toyoshima, C, Iwasawa, S, Ogawa, H, Hirata, A, Tsueda, J, Inesi, G.
Deposit date:2013-01-27
Release date:2013-03-06
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state.
Nature, 495, 2013
3WGV
DownloadVisualize
BU of 3wgv by Molmil
Crystal structure of a Na+-bound Na+,K+-ATPase preceding the E1P state with oligomycin
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Kanai, R, Ogawa, H, Vilsen, B, Cornelius, F, Toyoshima, C.
Deposit date:2013-08-09
Release date:2013-10-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of a Na1-bound Na1,K1-ATPase preceding the E1P state
Nature, 502, 2013
3W5B
DownloadVisualize
BU of 3w5b by Molmil
Crystal structure of the recombinant SERCA1a (calcium pump of fast twitch skeletal muscle) in the E1.Mg2+ state
Descriptor: 2',3'-O-[(1r)-2,4,6-trinitrocyclohexa-2,5-diene-1,1-diyl]adenosine 5'-(dihydrogen phosphate), MAGNESIUM ION, PHOSPHATIDYLETHANOLAMINE, ...
Authors:Toyoshima, C, Iwasawa, S, Ogawa, H, Hirata, A, Tsueda, J, Inesi, G.
Deposit date:2013-01-27
Release date:2013-03-06
Last modified:2013-03-27
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of the calcium pump and sarcolipin in the Mg2+-bound E1 state.
Nature, 495, 2013
6JXH
DownloadVisualize
BU of 6jxh by Molmil
K+-bound E2-MgF state of the gastric proton pump (Tyr799Trp)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Abe, K, Irie, K.
Deposit date:2019-04-23
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
6A69
DownloadVisualize
BU of 6a69 by Molmil
Cryo-EM structure of a P-type ATPase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Neuroplastin, Plasma membrane calcium-transporting ATPase 1
Authors:Gong, D.S, Chi, X.M, Ren, K, Huang, G.X.Y, Zhou, G.W, Yan, N, Lei, J.L, Zhou, Q.
Deposit date:2018-06-27
Release date:2018-09-19
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (4.11 Å)
Cite:Structure of the human plasma membrane Ca2+-ATPase 1 in complex with its obligatory subunit neuroplastin.
Nat Commun, 9, 2018
6JXJ
DownloadVisualize
BU of 6jxj by Molmil
Rb+-bound E2-AlF state of the gastric proton pump (Tyr799Trp)
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Abe, K, Irie, K.
Deposit date:2019-04-23
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
6JXK
DownloadVisualize
BU of 6jxk by Molmil
Rb+-bound E2-MgF state of the gastric proton pump (Wild-type)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, MAGNESIUM ION, ...
Authors:Abe, K, Irie, K, Yamamoto, K.
Deposit date:2019-04-23
Release date:2019-08-14
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (4.3 Å)
Cite:A single K + -binding site in the crystal structure of the gastric proton pump.
Elife, 8, 2019
4BEW
DownloadVisualize
BU of 4bew by Molmil
SERCA bound to phosphate analogue
Descriptor: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, ACETATE ION, MAGNESIUM ION, ...
Authors:Drachmann, N.D, Mattle, D, Laursen, M, Bublitz, M, Olesen, C, Moeller, J.V, Nissen, P, Morth, J.P.
Deposit date:2013-03-12
Release date:2014-02-19
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Serca Bound to Phosphate Analogue
To be Published
2DQS
DownloadVisualize
BU of 2dqs by Molmil
Crystal structure of the calcium pump with amppcp in the absence of calcium
Descriptor: MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
Authors:Toyoshima, C, Norimatsu, Y, Tsueda, J.
Deposit date:2006-05-29
Release date:2007-06-05
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the calcium pump with a bound ATP analogue in the absence of calcium
To be Published
2C8K
DownloadVisualize
BU of 2c8k by Molmil
Crystal Structure of (SR) Calcium-ATPase E2(Tg) with partially occupied AMPPCP site
Descriptor: ARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 1, MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, ...
Authors:Jensen, A.M, Sorensen, T.L, Olesen, C, Moller, J.V, Nissen, P.
Deposit date:2005-12-06
Release date:2006-06-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Modulatory and Catalytic Modes of ATP Binding by the Calcium Pump
Embo J., 25, 2006
2C88
DownloadVisualize
BU of 2c88 by Molmil
Crystal Structure Of (SR) Calcium-ATPase E2(Tg):AMPPCP form
Descriptor: MAGNESIUM ION, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
Authors:Jensen, A.M, Sorensen, T.L, Olesen, C, Moller, J.V, Nissen, P.
Deposit date:2005-12-02
Release date:2006-06-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Modulatory and Catalytic Modes of ATP Binding by the Calcium Pump
Embo J., 25, 2006
2C8L
DownloadVisualize
BU of 2c8l by Molmil
Crystal Structure of (SR) Calcium-ATPase E2(Tg) form
Descriptor: OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, ...
Authors:Jensen, A.M, Sorensen, T.L, Olesen, C, Moller, J.V, Nissen, P.
Deposit date:2005-12-06
Release date:2006-06-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Modulatory and Catalytic Modes of ATP Binding by the Calcium Pump
Embo J., 25, 2006
2BY4
DownloadVisualize
BU of 2by4 by Molmil
SR Ca(2+)-ATPase in the HnE2 state complexed with the thapsigargin derivative Boc-12ADT.
Descriptor: (3S,3AR,4S,6S,6AR,7S,8S,9BS)-6-(ACETYLOXY)-3,3A-DIHYDROXY-3,6,9-TRIMETHYL-8-{[(2Z)-2-METHYLBUT-2-ENOYL]OXY}-7-(OCTANOYLOXY)-2-OXO-2,3,3A,4,5,6,6A,7,8,9B-DECAHYDROAZULENO[4,5-B]FURAN-4-YL 12-[(TERT-BUTOXYCARBONYL)AMINO]DODECANOATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Jensen, A.L, Moller, J.V, Soehoel, H, Denmeade, S.R, Isaacs, J.T, Olsen, C.E, Christensen, S.B, Nissen, P.
Deposit date:2005-07-28
Release date:2006-04-07
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Natural Products as Starting Materials for Development of Second-Generation Serca Inhibitors Targeted Towards Prostate Cancer Cells
Bioorg.Med.Chem., 14, 2006
2C9M
DownloadVisualize
BU of 2c9m by Molmil
Structure of (SR) Calcium-ATPase in the Ca2E1 state solved in a P1 crystal form.
Descriptor: CALCIUM ION, CHLORIDE ION, POTASSIUM ION, ...
Authors:Lund Jensen, A.-M, Sorensen, T.L.-M, Olesen, C, Moller, J.V, Nissen, P.
Deposit date:2005-12-13
Release date:2006-12-18
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Modulatory and Catalytic Modes of ATP Binding by the Calcium Pump
Embo J., 25, 2006
2EAT
DownloadVisualize
BU of 2eat by Molmil
Crystal structure of the SR CA2+-ATPASE with bound CPA and TG
Descriptor: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
Authors:Takahashi, M, Kondou, Y, Toyoshima, C.
Deposit date:2007-02-02
Release date:2007-03-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EAU
DownloadVisualize
BU of 2eau by Molmil
Crystal structure of the SR CA2+-ATPASE with bound CPA in the presence of curcumin
Descriptor: (6AR,11AS,11BR)-10-ACETYL-9-HYDROXY-7,7-DIMETHYL-2,6,6A,7,11A,11B-HEXAHYDRO-11H-PYRROLO[1',2':2,3]ISOINDOLO[4,5,6-CD]INDOL-11-ONE, PHOSPHATIDYLETHANOLAMINE, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1
Authors:Takahashi, M, Kondou, Y, Toyoshima, C.
Deposit date:2007-02-02
Release date:2007-03-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EAR
DownloadVisualize
BU of 2ear by Molmil
P21 crystal of the SR CA2+-ATPase with bound TG
Descriptor: OCTANOIC ACID [3S-[3ALPHA, 3ABETA, 4ALPHA, ...
Authors:Takahashi, M, Kondou, Y, Toyoshima, C.
Deposit date:2007-02-02
Release date:2007-03-27
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Interdomain communication in calcium pump as revealed in the crystal structures with transmembrane inhibitors
Proc.Natl.Acad.Sci.Usa, 104, 2007
2AGV
DownloadVisualize
BU of 2agv by Molmil
Crystal structure of the SR CA2+-ATPASE with BHQ and TG
Descriptor: 2,5-DITERT-BUTYLBENZENE-1,4-DIOL, OCTANOIC ACID [3S-[3ALPHA, 3ABETA, ...
Authors:Toyoshima, C, Obara, K, Norimatsu, Y.
Deposit date:2005-07-27
Release date:2005-10-25
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Inaugural Article: Structural role of countertransport revealed in Ca2+ pump crystal structure in the absence of Ca2+.
Proc.Natl.Acad.Sci.USA, 102, 2005
7D94
DownloadVisualize
BU of 7d94 by Molmil
Crystal Structure of the Na+,K+-ATPase in the E2P state with bound one Mg2+ and one Rb+ in the presence of bufalin
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Kanai, R, Cornelius, F, Ogawa, H, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-12
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021
7DDF
DownloadVisualize
BU of 7ddf by Molmil
Crystal structures of Na+,K+-ATPase in complex with beryllium fluoride
Descriptor: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Ogawa, H, Cornelius, F, Kanai, R, Motoyama, K, Vilsen, B, Toyoshima, C.
Deposit date:2020-10-29
Release date:2021-01-27
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (4.62 Å)
Cite:Binding of cardiotonic steroids to Na + ,K + -ATPase in the E2P state.
Proc.Natl.Acad.Sci.USA, 118, 2021

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon