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7Y45

Cryo-EM structure of the Na+,K+-ATPase in the E2.2K+ state

Summary for 7Y45
Entry DOI10.2210/pdb7y45/pdb
Related7Y46
EMDB information33601
DescriptorNa, K-ATPase alpha subunit, 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE, Na+,K+-ATPase beta subunit, ... (11 entities in total)
Functional Keywordsna+, k+-atpase, membrane protein, ion transport, transport protein
Biological sourceSqualus acanthias (spiny dogfish)
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Total number of polymer chains6
Total formula weight348137.10
Authors
Kanai, R.,Cornelius, F.,Vilsen, B.,Toyoshima, C. (deposition date: 2022-06-14, release date: 2022-07-13, Last modification date: 2024-10-30)
Primary citationKanai, R.,Cornelius, F.,Vilsen, B.,Toyoshima, C.
Cryo-electron microscopy of Na + ,K + -ATPase reveals how the extracellular gate locks in the E2·2K + state.
Febs Lett., 596:2513-2524, 2022
Cited by
PubMed Abstract: Na ,K -ATPase (NKA) is one of the most important members of the P-type ion-translocating ATPases and plays a pivotal role in establishing electrochemical gradients for Na and K across the cell membrane. Presented here is a 3.3 Å resolution structure of NKA in the E2·2K state solved by cryo-electron microscopy. It is a stable state with two occluded K after transferring three Na into the extracellular medium and releasing inorganic phosphate bound to the cytoplasmic P domain. We describe how the extracellular ion pathway wide open in the E2P state becomes closed and locked in E2·2K , linked to events at the phosphorylation site more than 50 Å away. We also show, although at low resolution, how ATP binding to NKA in E2·2K relaxes the gating machinery and thereby accelerates the transition into the next step, that is, the release of K into the cytoplasm, more than 100 times.
PubMed: 35747985
DOI: 10.1002/1873-3468.14437
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (3.3 Å)
Structure validation

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