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PDB: 249 results

6GYL
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BU of 6gyl by Molmil
Structure of a yeast closed complex with distorted DNA (core CCdist)
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Dienemann, C, Schwalb, B, Schilbach, S, Cramer, P.
Deposit date:2018-06-30
Release date:2018-12-05
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Promoter Distortion and Opening in the RNA Polymerase II Cleft.
Mol. Cell, 73, 2019
5G5L
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BU of 5g5l by Molmil
RNA polymerase I-Rrn3 complex at 4.8 A resolution
Descriptor: DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA12, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA135, DNA-DIRECTED RNA POLYMERASE I SUBUNIT RPA14, ...
Authors:Engel, C, Plitzko, J, Cramer, P.
Deposit date:2016-05-26
Release date:2016-07-27
Last modified:2018-10-24
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:RNA Polymerase I-Rrn3 Complex at 4.8 A Resolution
Nat.Commun., 7, 2016
6CND
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BU of 6cnd by Molmil
Yeast RNA polymerase III natural open complex (nOC)
Descriptor: DNA (71-MER), DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, ...
Authors:Han, Y, He, Y.
Deposit date:2018-03-08
Release date:2018-08-22
Last modified:2020-01-08
Method:ELECTRON MICROSCOPY (4.8 Å)
Cite:Structural visualization of RNA polymerase III transcription machineries.
Cell Discov, 4, 2018
4BXZ
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BU of 4bxz by Molmil
RNA Polymerase II-Bye1 complex
Descriptor: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ...
Authors:Kinkelin, K, Wozniak, G.G, Rothbart, S.B, Lidschreiber, M, Strahl, B.D, Cramer, P.
Deposit date:2013-07-16
Release date:2013-09-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (4.8 Å)
Cite:Structures of RNA Polymerase II Complexes with Bye1, a Chromatin-Binding Phf3/Dido1 Homologue
Proc.Natl.Acad.Sci.USA, 110, 2013
5LMX
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BU of 5lmx by Molmil
Monomeric RNA polymerase I at 4.9 A resolution
Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
Authors:Torreira, E, Louro, J.A, Gil-Carton, D, Gallego, O, Calvo, O, Fernandez-Tornero, C.
Deposit date:2016-08-02
Release date:2017-03-22
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:The dynamic assembly of distinct RNA polymerase I complexes modulates rDNA transcription.
Elife, 6, 2017
6GYK
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BU of 6gyk by Molmil
Structure of a yeast closed complex (core CC1)
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Dienemann, C, Schwalb, B, Schilbach, S, Cramer, P.
Deposit date:2018-06-30
Release date:2018-12-05
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5.1 Å)
Cite:Promoter Distortion and Opening in the RNA Polymerase II Cleft.
Mol. Cell, 73, 2019
4YM7
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BU of 4ym7 by Molmil
RNA polymerase I structure with an alternative dimer hinge
Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
Authors:Kostrewa, D, Kuhn, C.-D, Engel, C, Cramer, P.
Deposit date:2015-03-06
Release date:2015-09-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (5.5 Å)
Cite:An alternative RNA polymerase I structure reveals a dimer hinge.
Acta Crystallogr.,Sect.D, 71, 2015
6F42
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BU of 6f42 by Molmil
RNA Polymerase III closed complex CC1.
Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerase III subunit RPC10, DNA-directed RNA polymerase III subunit RPC2, ...
Authors:Vorlaender, M.K, Khatter, H, Wetzel, R, Hagen, W.J.H, Mueller, C.W.
Deposit date:2017-11-29
Release date:2018-01-17
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5.5 Å)
Cite:Molecular mechanism of promoter opening by RNA polymerase III.
Nature, 553, 2018
5OQM
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BU of 5oqm by Molmil
STRUCTURE OF YEAST TRANSCRIPTION PRE-INITIATION COMPLEX WITH TFIIH AND CORE MEDIATOR
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Schilbach, S, Hantsche, M, Tegunov, D, Dienemann, C, Wigge, C, Urlaub, H, Cramer, P.
Deposit date:2017-08-13
Release date:2018-05-09
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Structures of transcription pre-initiation complex with TFIIH and Mediator.
Nature, 551, 2017
5VVR
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BU of 5vvr by Molmil
Ternary complex of RNA Pol II, transcription scaffold and Rad26
Descriptor: DNA (NTS), DNA (TS), DNA repair and recombination protein RAD26, ...
Authors:Lahiri, I, Leschziner, A.E.
Deposit date:2017-05-19
Release date:2017-11-22
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (5.8 Å)
Cite:Structural basis for the initiation of eukaryotic transcription-coupled DNA repair.
Nature, 551, 2017
5FMF
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BU of 5fmf by Molmil
the P-lobe of RNA polymerase II pre-initiation complex
Descriptor: DNA REPAIR HELICASE RAD25, SSL2, DNA REPAIR HELICASE RAD3, ...
Authors:Murakami, K, Tsai, K, Kalisman, N, Bushnell, D.A, Asturias, F.J, Kornberg, R.D.
Deposit date:2015-11-03
Release date:2015-11-25
Last modified:2017-07-12
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Structure of an RNA Polymerase II Pre-Initiation Complex
Proc.Natl.Acad.Sci.USA, 112, 2015
5VVS
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BU of 5vvs by Molmil
RNA pol II elongation complex
Descriptor: DNA (NTS), DNA (TS), DNA-directed RNA polymerase II subunit RPB1, ...
Authors:Lahiri, I, Leschziner, A.E.
Deposit date:2017-05-20
Release date:2017-11-22
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (6.4 Å)
Cite:Structural basis for the initiation of eukaryotic transcription-coupled DNA repair.
Nature, 551, 2017
4V1M
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BU of 4v1m by Molmil
Architecture of the RNA polymerase II-Mediator core transcription initiation complex
Descriptor: 5'-D(*AP*AP*GP*TP*AP*CP*TP*TP*GP*AP)-3', 5'-D(*CP*CP*AP*GP*GP*AP)-3', 5'-D(*TP*CP*AP*AP*GP*TP*AP*CP*TP*TP*TP*TP*TP*CP *CP*BRUP*GP*GP*TP*C)-3', ...
Authors:Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P.
Deposit date:2014-09-29
Release date:2015-02-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Architecture of the RNA Polymerase II-Mediator Core Initiation Complex.
Nature, 518, 2015
7ZSB
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BU of 7zsb by Molmil
Yeast RNA polymerase II transcription pre-initiation complex with the +1 nucleosome and NTP, complex C
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Wang, H, Cramer, P.
Deposit date:2022-05-06
Release date:2022-11-16
Last modified:2023-03-01
Method:ELECTRON MICROSCOPY (6.6 Å)
Cite:Structures of transcription preinitiation complex engaged with the +1 nucleosome.
Nat.Struct.Mol.Biol., 30, 2023
6GYM
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BU of 6gym by Molmil
Structure of a yeast closed complex with distorted DNA (CCdist)
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
Authors:Dienemann, C, Schwalb, B, Schilbach, S, Cramer, P.
Deposit date:2018-06-30
Release date:2018-12-05
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Promoter Distortion and Opening in the RNA Polymerase II Cleft.
Mol. Cell, 73, 2019
5N60
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BU of 5n60 by Molmil
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation I)
Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
Authors:Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
Deposit date:2017-02-14
Release date:2017-04-05
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
5N5Z
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BU of 5n5z by Molmil
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation II)
Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
Authors:Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
Deposit date:2017-02-14
Release date:2017-04-05
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
5N5Y
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BU of 5n5y by Molmil
Cryo-EM structure of RNA polymerase I in complex with Rrn3 and Core Factor (Orientation III)
Descriptor: DNA-directed RNA polymerase I subunit RPA12, DNA-directed RNA polymerase I subunit RPA135, DNA-directed RNA polymerase I subunit RPA14, ...
Authors:Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
Deposit date:2017-02-14
Release date:2017-04-05
Last modified:2018-10-03
Method:ELECTRON MICROSCOPY (7.7 Å)
Cite:Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
4V1N
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BU of 4v1n by Molmil
Architecture of the RNA polymerase II-Mediator core transcription initiation complex
Descriptor: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ...
Authors:Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P.
Deposit date:2014-09-29
Release date:2015-02-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (7.8 Å)
Cite:Architecture of the RNA Polymerase II-Mediator Core Initiation Complex.
Nature, 518, 2015
5FZ5
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BU of 5fz5 by Molmil
Transcription initiation complex structures elucidate DNA opening (CC)
Descriptor: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ...
Authors:Plaschka, C, Hantsche, M, Dienemann, C, Burzinski, C, Plitzko, J, Cramer, P.
Deposit date:2016-03-10
Release date:2016-05-18
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8.8 Å)
Cite:Transcription Initiation Complex Structures Elucidate DNA Opening
Nature, 533, 2016
4V1O
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BU of 4v1o by Molmil
Architecture of the RNA polymerase II-Mediator core transcription initiation complex
Descriptor: DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB1, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB11, DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2, ...
Authors:Plaschka, C, Lariviere, L, Wenzeck, L, Hemann, M, Tegunov, D, Petrotchenko, E.V, Borchers, C.H, Baumeister, W, Herzog, F, Villa, E, Cramer, P.
Deposit date:2014-09-29
Release date:2015-02-04
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (9.7 Å)
Cite:Architecture of the RNA Polymerase II-Mediator Core Initiation Complex.
Nature, 518, 2015
5SVA
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BU of 5sva by Molmil
Mediator-RNA Polymerase II Pre-Initiation Complex
Descriptor: 108bp HIS4 Promoter Non-template Strand (-92/+16), 108bp HIS4 Promoter Template Strand (+16/-92), DNA repair helicase RAD25, ...
Authors:Robinson, P.J, Bushnell, D.A, Kornberg, R.D.
Deposit date:2016-08-05
Release date:2016-09-28
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (15.3 Å)
Cite:Structure of a Complete Mediator-RNA Polymerase II Pre-Initiation Complex.
Cell, 166, 2016
3J1N
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BU of 3j1n by Molmil
Cryo-EM map of a yeast minimal preinitiation complex interacting with the Mediator Head module
Descriptor: DNA-directed RNA polymerase II subunit RPABC1, DNA-directed RNA polymerase II subunit RPABC2, DNA-directed RNA polymerase II subunit RPABC3, ...
Authors:Asturias, F.J, Imasaki, T.
Deposit date:2012-03-29
Release date:2013-03-06
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Interaction of the mediator head module with RNA polymerase II.
Structure, 20, 2012
3J0K
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BU of 3j0k by Molmil
Orientation of RNA polymerase II within the human VP16-Mediator-pol II-TFIIF assembly
Descriptor: DNA-directed RNA polymerase II 13.6 kDa polypeptide, DNA-directed RNA polymerase II 140 kDa polypeptide, DNA-directed RNA polymerase II 19 kDa polypeptide, ...
Authors:Bernecky, C, Grob, P, Ebmeier, C.C, Nogales, E, Taatjes, D.J.
Deposit date:2011-10-04
Release date:2011-10-19
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (36 Å)
Cite:Molecular architecture of the human Mediator-RNA polymerase II-TFIIF assembly.
Plos Biol., 9, 2011

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