6CND

Yeast RNA polymerase III natural open complex (nOC)

Summary for 6CND

• Entry DOI: 10.2210/pdb6cnd/pdb
• EMDB information: 7532
• Descriptor: DNA-directed RNA polymerase III subunit RPC1, DNA-directed RNA polymerases I, II, and III subunit RPABC5, DNA-directed RNA polymerases I and III subunit RPAC2, ... (22 entities in total)
• Functional Keywords: rna polymerase iii, tfiiib, trna, transcription, transcription-dna complex, transcription/dna
• Biological source: Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast); More
• Total number of polymer chains: 21
• Total formula weight: 886228.58

Authors

Han, Y.,He, Y. (deposition date: 2018-03-08, release date: 2018-08-22, Last modification date: 2020-01-08)

Primary citation

Han, Y.,Yan, C.,Fishbain, S.,Ivanov, I.,He, Y.
Structural visualization of RNA polymerase III transcription machineries.
Cell Discov, 4:40-40, 2018

PubMed Abstract: RNA polymerase III (Pol III) transcription initiation requires the action of the transcription factor IIIB (TFIIIB) and is highly regulated. Here, we determine the structures of Pol III pre-initiation complexes (PICs) using single particle cryo-electron microscopy (cryo-EM). We observe stable Pol III-TFIIIB complexes using nucleic acid scaffolds mimicking various functional states, in which TFIIIB tightly encircles the upstream promoter DNA. There is an intricate interaction between TFIIIB and Pol III, which stabilizes the winged-helix domains of the C34 subunit of Pol III over the active site cleft. The architecture of Pol III PIC more resembles that of the Pol II PIC than the Pol I PIC. In addition, we also obtain a 3D reconstruction of Pol III in complex with TFIIIB using the elongation complex (EC) scaffold, shedding light on the mechanism of facilitated recycling of Pol III prior to transcription re-initiation.

PubMed: 30083386
DOI: 10.1038/s41421-018-0044-z

Experimental method

ELECTRON MICROSCOPY (4.8 Å)